RNA–Protein interactions for RNA: ENST00000547268.1

PRDM4-203, Transcript of PR/SET domain 4, humanhuman

TSL 5

Gene PRDM4, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-203ENST00000547268 USP47Q96K76 1375 aa29.09■■■□□ 2.25
PRDM4-203ENST00000547268 PUS7Q96PZ0 661 aaKnown RBP29.08■■■□□ 2.25
PRDM4-203ENST00000547268 BRD4O60885 1362 aaPredicted RBP29.08■■■□□ 2.25
PRDM4-203ENST00000547268 USP6P35125 1406 aa29.06■■■□□ 2.24
PRDM4-203ENST00000547268 SSH2Q76I76 1423 aa29.06■■■□□ 2.24
PRDM4-203ENST00000547268 BCL9LQ86UU0 1499 aa29.05■■■□□ 2.24
PRDM4-203ENST00000547268 USP21Q9UK80 565 aa29.05■■■□□ 2.24
PRDM4-203ENST00000547268 ABCA3Q99758 1704 aa29.05■■■□□ 2.24
PRDM4-203ENST00000547268 MARF1Q9Y4F3 1742 aaKnown RBP29.04■■■□□ 2.24
PRDM4-203ENST00000547268 QTRT2Q9H974 415 aaKnown RBP29.04■■■□□ 2.24
PRDM4-203ENST00000547268 CPSF1Q10570 1443 aaKnown RBP29.03■■■□□ 2.24
PRDM4-203ENST00000547268 SLC24A1O60721 1099 aa29.03■■■□□ 2.24
PRDM4-203ENST00000547268 SLIT2O94813 1529 aa29.03■■■□□ 2.24
PRDM4-203ENST00000547268 PLEKHG5O94827 1062 aa29.02■■■□□ 2.24
PRDM4-203ENST00000547268 RXRBP28702 533 aa29.02■■■□□ 2.24
PRDM4-203ENST00000547268 HAP1P54257 671 aaPredicted RBP29.02■■■□□ 2.24
PRDM4-203ENST00000547268 ZNF692Q9BU19 519 aaPredicted RBP29.02■■■□□ 2.24
PRDM4-203ENST00000547268 CRYBG1Q9Y4K1 1723 aa29.01■■■□□ 2.23
PRDM4-203ENST00000547268 ABTB2Q8N961 1025 aa29■■■□□ 2.23
PRDM4-203ENST00000547268 ATRNO75882 1429 aa28.99■■■□□ 2.23
PRDM4-203ENST00000547268 FAM83GA6ND36 823 aa28.98■■■□□ 2.23
PRDM4-203ENST00000547268 NUTM2GQ5VZR2 741 aa28.98■■■□□ 2.23
PRDM4-203ENST00000547268 TRPC5Q9UL62 973 aaPredicted RBP28.98■■■□□ 2.23
PRDM4-203ENST00000547268 CD163L1Q9NR16 1453 aa28.97■■■□□ 2.23
PRDM4-203ENST00000547268 USP19O94966 1318 aa28.97■■■□□ 2.23
PRDM4-203ENST00000547268 RBM6P78332 1123 aaKnown RBP28.96■■■□□ 2.23
PRDM4-203ENST00000547268 CDK12Q9NYV4 1490 aaPredicted RBP28.96■■■□□ 2.23
PRDM4-203ENST00000547268 UNC5CLQ8IV45 518 aa28.95■■■□□ 2.22
PRDM4-203ENST00000547268 SLC12A5Q9H2X9 1139 aa28.95■■■□□ 2.22
PRDM4-203ENST00000547268 TTC21BQ7Z4L5 1316 aa28.94■■■□□ 2.22
PRDM4-203ENST00000547268 NLRP13Q86W25 1043 aa28.93■■■□□ 2.22
PRDM4-203ENST00000547268 AKAP12Q02952 1782 aa28.93■■■□□ 2.22
PRDM4-203ENST00000547268 KTN1Q86UP2 1357 aaKnown RBP28.92■■■□□ 2.22
PRDM4-203ENST00000547268 TMF1P82094 1093 aa28.92■■■□□ 2.22
PRDM4-203ENST00000547268 TMC1Q8TDI8 760 aa28.91■■■□□ 2.22
PRDM4-203ENST00000547268 NINLQ9Y2I6 1382 aa28.9■■■□□ 2.22
PRDM4-203ENST00000547268 UPF1Q92900 1129 aaKnown RBP eCLIP28.9■■■□□ 2.22
PRDM4-203ENST00000547268 PHRF1Q9P1Y6 1649 aaKnown RBP28.9■■■□□ 2.22
PRDM4-203ENST00000547268 TTC21AQ8NDW8 1320 aa28.9■■■□□ 2.22
PRDM4-203ENST00000547268 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.89■■■□□ 2.22
PRDM4-203ENST00000547268 KIAA0232Q92628 1395 aa28.88■■■□□ 2.21
PRDM4-203ENST00000547268 NRKQ7Z2Y5 1582 aa28.88■■■□□ 2.21
PRDM4-203ENST00000547268 NLRP6P59044 892 aa28.88■■■□□ 2.21
PRDM4-203ENST00000547268 PIK3C2AO00443 1686 aa28.87■■■□□ 2.21
PRDM4-203ENST00000547268 GCP02774 474 aa28.87■■■□□ 2.21
PRDM4-203ENST00000547268 GJD4Q96KN9 370 aaPredicted RBP28.87■■■□□ 2.21
PRDM4-203ENST00000547268 PRDM11Q9NQV5 511 aa28.87■■■□□ 2.21
PRDM4-203ENST00000547268 A0A1W2PP64 1363 aa28.87■■■□□ 2.21
PRDM4-203ENST00000547268 NWD2Q9ULI1 1742 aa28.86■■■□□ 2.21
PRDM4-203ENST00000547268 HDGFL2Q7Z4V5 671 aaPredicted RBP28.86■■■□□ 2.21
PRDM4-203ENST00000547268 TERF2IPQ9NYB0 399 aa28.86■■■□□ 2.21
PRDM4-203ENST00000547268 PLCH1Q4KWH8 1693 aa28.86■■■□□ 2.21
PRDM4-203ENST00000547268 CPDO75976 1380 aa28.86■■■□□ 2.21
PRDM4-203ENST00000547268 MON2Q7Z3U7 1717 aa28.86■■■□□ 2.21
PRDM4-203ENST00000547268 RGS12O14924 1447 aa28.86■■■□□ 2.21
PRDM4-203ENST00000547268 COL14A1Q05707 1796 aaKnown RBP28.85■■■□□ 2.21
PRDM4-203ENST00000547268 ZC3H6P61129 1189 aaKnown RBP28.85■■■□□ 2.21
PRDM4-203ENST00000547268 VPS72Q15906 364 aa28.85■■■□□ 2.21
PRDM4-203ENST00000547268 BTG4Q9NY30 223 aa28.85■■■□□ 2.21
PRDM4-203ENST00000547268 SLIT3O75094 1523 aa28.84■■■□□ 2.21
PRDM4-203ENST00000547268 CDCA8Q53HL2 280 aa28.83■■■□□ 2.21
PRDM4-203ENST00000547268 EIF4G2P78344 907 aaKnown RBP eCLIP28.82■■■□□ 2.2
PRDM4-203ENST00000547268 EDC4Q6P2E9 1401 aaKnown RBP28.82■■■□□ 2.2
PRDM4-203ENST00000547268 CHRNA2Q15822 529 aa28.81■■■□□ 2.2
PRDM4-203ENST00000547268 NRAPQ86VF7 1730 aa28.8■■■□□ 2.2
PRDM4-203ENST00000547268 USP31Q70CQ4 1352 aa28.8■■■□□ 2.2
PRDM4-203ENST00000547268 HSPA5P11021 654 aaKnown RBP28.8■■■□□ 2.2
PRDM4-203ENST00000547268 GLI3P10071 1580 aa28.79■■■□□ 2.2
PRDM4-203ENST00000547268 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.79■■■□□ 2.2
PRDM4-203ENST00000547268 ANKRD36BQ8N2N9 1353 aa28.78■■■□□ 2.2
PRDM4-203ENST00000547268 NME9Q86XW9 330 aa28.77■■■□□ 2.2
PRDM4-203ENST00000547268 ZRANB1Q9UGI0 708 aa28.77■■■□□ 2.2
PRDM4-203ENST00000547268 ONECUT3O60422 494 aaPredicted RBP28.74■■■□□ 2.19
PRDM4-203ENST00000547268 LMO7Q8WWI1 1683 aa28.74■■■□□ 2.19
PRDM4-203ENST00000547268 KCNH5Q8NCM2 988 aa28.73■■■□□ 2.19
PRDM4-203ENST00000547268 CAMTA1Q9Y6Y1 1673 aa28.73■■■□□ 2.19
PRDM4-203ENST00000547268 ARHGEF25Q86VW2 580 aa28.72■■■□□ 2.19
PRDM4-203ENST00000547268 USP54Q70EL1 1684 aa28.72■■■□□ 2.19
PRDM4-203ENST00000547268 AATKQ6ZMQ8 1374 aa28.72■■■□□ 2.19
PRDM4-203ENST00000547268 SPATA31A5Q5VU36 1347 aa28.71■■■□□ 2.19
PRDM4-203ENST00000547268 SPATA31A7Q8IWB4 1347 aa28.71■■■□□ 2.19
PRDM4-203ENST00000547268 NFAT5O94916 1531 aa28.7■■■□□ 2.19
PRDM4-203ENST00000547268 CCDC9Q9Y3X0 531 aaKnown RBP28.7■■■□□ 2.18
PRDM4-203ENST00000547268 OVOS2A0A0J9YW53 1432 aa28.69■■■□□ 2.18
PRDM4-203ENST00000547268 OVOS2Q6IE36 1432 aa28.69■■■□□ 2.18
PRDM4-203ENST00000547268 STRN4Q9NRL3 753 aa28.66■■■□□ 2.18
PRDM4-203ENST00000547268 MYOM1P52179 1685 aa28.66■■■□□ 2.18
PRDM4-203ENST00000547268 SPATA31A1Q5TZJ5 1347 aa28.66■■■□□ 2.18
PRDM4-203ENST00000547268 SEPT12Q8IYM1 358 aa28.65■■■□□ 2.18
PRDM4-203ENST00000547268 CARD14Q9BXL6 1004 aa28.65■■■□□ 2.18
PRDM4-203ENST00000547268 COL5A2P05997 1499 aaPredicted RBP28.65■■■□□ 2.18
PRDM4-203ENST00000547268 AXIN2Q9Y2T1 843 aa28.64■■■□□ 2.18
PRDM4-203ENST00000547268 COL18A1P39060 1754 aa28.64■■■□□ 2.18
PRDM4-203ENST00000547268 C11orf95C9JLR9 678 aaPredicted RBP28.63■■■□□ 2.17
PRDM4-203ENST00000547268 SOX12O15370 315 aa28.63■■■□□ 2.17
PRDM4-203ENST00000547268 EVA1CP58658 441 aa28.63■■■□□ 2.17
PRDM4-203ENST00000547268 LARP1Q6PKG0 1096 aaKnown RBP28.63■■■□□ 2.17
PRDM4-203ENST00000547268 FYB1O15117 783 aa28.62■■■□□ 2.17
PRDM4-203ENST00000547268 FAM98CQ17RN3 349 aaKnown RBP28.62■■■□□ 2.17
PRDM4-203ENST00000547268 ZBTB7CA1YPR0 619 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms