RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 NUDT16Q96DE0 195 aaKnown RBP14.89□□□□□ -0.03
BEST3-208ENST00000547208 CDK19Q9BWU1 502 aa14.89□□□□□ -0.03
BEST3-208ENST00000547208 COL14A1Q05707 1796 aaKnown RBP14.88□□□□□ -0.03
BEST3-208ENST00000547208 POLR3AO14802 1390 aaPredicted RBP14.88□□□□□ -0.03
BEST3-208ENST00000547208 GPRASP1Q5JY77 1395 aa14.88□□□□□ -0.03
BEST3-208ENST00000547208 NEUROD1Q13562 356 aa14.88□□□□□ -0.03
BEST3-208ENST00000547208 CENPJQ9HC77 1338 aaPredicted RBP14.87□□□□□ -0.03
BEST3-208ENST00000547208 RALGAPBQ86X10 1494 aa14.86□□□□□ -0.03
BEST3-208ENST00000547208 LMOD2Q6P5Q4 547 aa14.85□□□□□ -0.03
BEST3-208ENST00000547208 UNC5CLQ8IV45 518 aa14.85□□□□□ -0.03
BEST3-208ENST00000547208 NGDNQ8NEJ9 315 aaKnown RBP14.85□□□□□ -0.03
BEST3-208ENST00000547208 AKAP12Q02952 1782 aa14.85□□□□□ -0.03
BEST3-208ENST00000547208 TRIM26Q12899 539 aaPredicted RBP14.84□□□□□ -0.03
BEST3-208ENST00000547208 NBPF8Q3BBV2 869 aa14.84□□□□□ -0.03
BEST3-208ENST00000547208 DEFB132Q7Z7B7 95 aa14.84□□□□□ -0.03
BEST3-208ENST00000547208 GJD4Q96KN9 370 aaPredicted RBP14.84□□□□□ -0.03
BEST3-208ENST00000547208 CCDC61Q9Y6R9 512 aa14.84□□□□□ -0.03
BEST3-208ENST00000547208 PLEKHG3A1L390 1219 aa14.83□□□□□ -0.04
BEST3-208ENST00000547208 PLEKHG5O94827 1062 aa14.83□□□□□ -0.04
BEST3-208ENST00000547208 ACEP12821 1306 aa14.83□□□□□ -0.04
BEST3-208ENST00000547208 ROCK2O75116 1388 aaKnown RBP14.83□□□□□ -0.04
BEST3-208ENST00000547208 ATAD2Q6PL18 1390 aa14.83□□□□□ -0.04
BEST3-208ENST00000547208 PPIP5K1Q6PFW1 1433 aa14.83□□□□□ -0.04
BEST3-208ENST00000547208 NRKQ7Z2Y5 1582 aa14.82□□□□□ -0.04
BEST3-208ENST00000547208 FAM83GA6ND36 823 aa14.82□□□□□ -0.04
BEST3-208ENST00000547208 HAP1P54257 671 aaPredicted RBP14.82□□□□□ -0.04
BEST3-208ENST00000547208 PAK3O75914 559 aaPredicted RBP14.8□□□□□ -0.04
BEST3-208ENST00000547208 CABP2Q9NPB3 220 aa14.8□□□□□ -0.04
BEST3-208ENST00000547208 ZRANB1Q9UGI0 708 aa14.8□□□□□ -0.04
BEST3-208ENST00000547208 PIK3C2AO00443 1686 aa14.79□□□□□ -0.04
BEST3-208ENST00000547208 SRPK2P78362 688 aaKnown RBP14.79□□□□□ -0.04
BEST3-208ENST00000547208 VPS72Q15906 364 aa14.79□□□□□ -0.04
BEST3-208ENST00000547208 MON2Q7Z3U7 1717 aa14.78□□□□□ -0.04
BEST3-208ENST00000547208 LMO7Q8WWI1 1683 aa14.78□□□□□ -0.04
BEST3-208ENST00000547208 THSD7AQ9UPZ6 1657 aa14.77□□□□□ -0.05
BEST3-208ENST00000547208 USP6P35125 1406 aa14.76□□□□□ -0.05
BEST3-208ENST00000547208 SSH2Q76I76 1423 aa14.76□□□□□ -0.05
BEST3-208ENST00000547208 TONSLQ96HA7 1378 aa14.76□□□□□ -0.05
BEST3-208ENST00000547208 SBNO2Q9Y2G9 1366 aa14.76□□□□□ -0.05
BEST3-208ENST00000547208 ONECUT3O60422 494 aaPredicted RBP14.76□□□□□ -0.05
BEST3-208ENST00000547208 BTG4Q9NY30 223 aa14.76□□□□□ -0.05
BEST3-208ENST00000547208 KIAA0232Q92628 1395 aa14.75□□□□□ -0.05
BEST3-208ENST00000547208 USP19O94966 1318 aa14.75□□□□□ -0.05
BEST3-208ENST00000547208 EVC2Q86UK5 1308 aa14.75□□□□□ -0.05
BEST3-208ENST00000547208 NUTM2GQ5VZR2 741 aa14.75□□□□□ -0.05
BEST3-208ENST00000547208 CABP1Q9NZU7 370 aa14.75□□□□□ -0.05
BEST3-208ENST00000547208 BRD4O60885 1362 aaPredicted RBP14.74□□□□□ -0.05
BEST3-208ENST00000547208 NPM3O75607 178 aaKnown RBP14.74□□□□□ -0.05
BEST3-208ENST00000547208 SLIT3O75094 1523 aa14.74□□□□□ -0.05
BEST3-208ENST00000547208 COL18A1P39060 1754 aa14.73□□□□□ -0.05
BEST3-208ENST00000547208 PSDA5PKW4 1024 aaPredicted RBP14.73□□□□□ -0.05
BEST3-208ENST00000547208 USP54Q70EL1 1684 aa14.73□□□□□ -0.05
BEST3-208ENST00000547208 CAMTA1Q9Y6Y1 1673 aa14.73□□□□□ -0.05
BEST3-208ENST00000547208 SEPT12Q8IYM1 358 aa14.72□□□□□ -0.05
BEST3-208ENST00000547208 ABTB2Q8N961 1025 aa14.72□□□□□ -0.05
BEST3-208ENST00000547208 PRDM11Q9NQV5 511 aa14.72□□□□□ -0.05
BEST3-208ENST00000547208 RGPD5Q99666 1765 aa14.72□□□□□ -0.05
BEST3-208ENST00000547208 CPDO75976 1380 aa14.72□□□□□ -0.05
BEST3-208ENST00000547208 SPATA31A5Q5VU36 1347 aa14.71□□□□□ -0.05
BEST3-208ENST00000547208 SPATA31A7Q8IWB4 1347 aa14.71□□□□□ -0.05
BEST3-208ENST00000547208 CPSF1Q10570 1443 aaKnown RBP14.71□□□□□ -0.05
BEST3-208ENST00000547208 ZC3H6P61129 1189 aaKnown RBP14.7□□□□□ -0.06
BEST3-208ENST00000547208 CHRNA2Q15822 529 aa14.7□□□□□ -0.06
BEST3-208ENST00000547208 CARD11Q9BXL7 1154 aa14.7□□□□□ -0.06
BEST3-208ENST00000547208 CCDC9Q9Y3X0 531 aaKnown RBP14.7□□□□□ -0.06
BEST3-208ENST00000547208 CD163L1Q9NR16 1453 aa14.69□□□□□ -0.06
BEST3-208ENST00000547208 WNK3Q9BYP7 1800 aa14.69□□□□□ -0.06
BEST3-208ENST00000547208 FAM182BQ5T319 152 aa14.69□□□□□ -0.06
BEST3-208ENST00000547208 FAM98CQ17RN3 349 aaKnown RBP14.68□□□□□ -0.06
BEST3-208ENST00000547208 NLRP13Q86W25 1043 aa14.68□□□□□ -0.06
BEST3-208ENST00000547208 TNS1Q9HBL0 1735 aaKnown RBP14.68□□□□□ -0.06
BEST3-208ENST00000547208 RGPD1P0DJD0 1748 aa14.67□□□□□ -0.06
BEST3-208ENST00000547208 GCP02774 474 aa14.67□□□□□ -0.06
BEST3-208ENST00000547208 SPATA31A1Q5TZJ5 1347 aa14.66□□□□□ -0.06
BEST3-208ENST00000547208 BLMP54132 1417 aaPredicted RBP14.66□□□□□ -0.06
BEST3-208ENST00000547208 PARP4Q9UKK3 1724 aaKnown RBP14.66□□□□□ -0.06
BEST3-208ENST00000547208 COL5A2P05997 1499 aaPredicted RBP14.66□□□□□ -0.06
BEST3-208ENST00000547208 KRT27Q7Z3Y8 459 aa14.66□□□□□ -0.06
BEST3-208ENST00000547208 CCDC125Q86Z20 511 aa14.66□□□□□ -0.06
BEST3-208ENST00000547208 NFAT5O94916 1531 aa14.66□□□□□ -0.06
BEST3-208ENST00000547208 LTN1O94822 1766 aa14.65□□□□□ -0.06
BEST3-208ENST00000547208 ZNF692Q9BU19 519 aaPredicted RBP14.65□□□□□ -0.06
BEST3-208ENST00000547208 TTC21BQ7Z4L5 1316 aa14.65□□□□□ -0.06
BEST3-208ENST00000547208 NLRP6P59044 892 aa14.64□□□□□ -0.07
BEST3-208ENST00000547208 TESK2Q96S53 571 aa14.64□□□□□ -0.07
BEST3-208ENST00000547208 STRN4Q9NRL3 753 aa14.64□□□□□ -0.07
BEST3-208ENST00000547208 RNF216Q9NWF9 866 aaPredicted RBP14.64□□□□□ -0.07
BEST3-208ENST00000547208 KTN1Q86UP2 1357 aaKnown RBP14.63□□□□□ -0.07
BEST3-208ENST00000547208 POTEDQ86YR6 584 aa14.63□□□□□ -0.07
BEST3-208ENST00000547208 TTC21AQ8NDW8 1320 aa14.63□□□□□ -0.07
BEST3-208ENST00000547208 AATKQ6ZMQ8 1374 aa14.62□□□□□ -0.07
BEST3-208ENST00000547208 LARP1Q6PKG0 1096 aaKnown RBP14.62□□□□□ -0.07
BEST3-208ENST00000547208 ST20-MTHFSA0A0A6YYL1 179 aa14.61□□□□□ -0.07
BEST3-208ENST00000547208 A0A0G2JS52 829 aa14.61□□□□□ -0.07
BEST3-208ENST00000547208 MYT1Q01538 1121 aa14.61□□□□□ -0.07
BEST3-208ENST00000547208 EN1Q05925 392 aaPredicted RBP14.61□□□□□ -0.07
BEST3-208ENST00000547208 PUS7Q96PZ0 661 aaKnown RBP14.61□□□□□ -0.07
BEST3-208ENST00000547208 LRRC37A3O60309 1634 aa14.61□□□□□ -0.07
BEST3-208ENST00000547208 LRP5O75197 1615 aa14.61□□□□□ -0.07
BEST3-208ENST00000547208 ABCC6O95255 1503 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms