RNA–Protein interactions for RNA: ENST00000547113.1

PRICKLE1-204, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 1 (best)

Gene PRICKLE1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-204ENST00000547113 QRICH2Q9H0J4 1663 aa25.64■■□□□ 1.69
PRICKLE1-204ENST00000547113 TRPM3Q9HCF6 1732 aaPredicted RBP25.63■■□□□ 1.69
PRICKLE1-204ENST00000547113 SLIT2O94813 1529 aa25.62■■□□□ 1.69
PRICKLE1-204ENST00000547113 CLSPNQ9HAW4 1339 aa25.62■■□□□ 1.69
PRICKLE1-204ENST00000547113 FAM83GA6ND36 823 aa25.61■■□□□ 1.69
PRICKLE1-204ENST00000547113 GJD4Q96KN9 370 aaPredicted RBP25.61■■□□□ 1.69
PRICKLE1-204ENST00000547113 TOPAZ1Q8N9V7 1692 aa25.59■■□□□ 1.69
PRICKLE1-204ENST00000547113 ABTB2Q8N961 1025 aa25.59■■□□□ 1.69
PRICKLE1-204ENST00000547113 ALS2Q96Q42 1657 aa25.58■■□□□ 1.69
PRICKLE1-204ENST00000547113 BRD4O60885 1362 aaPredicted RBP25.58■■□□□ 1.69
PRICKLE1-204ENST00000547113 MARF1Q9Y4F3 1742 aaKnown RBP25.58■■□□□ 1.69
PRICKLE1-204ENST00000547113 RGS12O14924 1447 aa25.58■■□□□ 1.69
PRICKLE1-204ENST00000547113 NUTM2GQ5VZR2 741 aa25.58■■□□□ 1.69
PRICKLE1-204ENST00000547113 TIMELESSQ9UNS1 1208 aa25.58■■□□□ 1.69
PRICKLE1-204ENST00000547113 SBNO2Q9Y2G9 1366 aa25.57■■□□□ 1.68
PRICKLE1-204ENST00000547113 ZNF692Q9BU19 519 aaPredicted RBP25.56■■□□□ 1.68
PRICKLE1-204ENST00000547113 ATAD2Q6PL18 1390 aa25.56■■□□□ 1.68
PRICKLE1-204ENST00000547113 VPS72Q15906 364 aa25.55■■□□□ 1.68
PRICKLE1-204ENST00000547113 NLRP13Q86W25 1043 aa25.54■■□□□ 1.68
PRICKLE1-204ENST00000547113 PRDM11Q9NQV5 511 aa25.54■■□□□ 1.68
PRICKLE1-204ENST00000547113 BTG4Q9NY30 223 aa25.54■■□□□ 1.68
PRICKLE1-204ENST00000547113 CCDC9Q9Y3X0 531 aaKnown RBP25.54■■□□□ 1.68
PRICKLE1-204ENST00000547113 UPF1Q92900 1129 aaKnown RBP eCLIP25.53■■□□□ 1.68
PRICKLE1-204ENST00000547113 SLC24A1O60721 1099 aa25.52■■□□□ 1.68
PRICKLE1-204ENST00000547113 USP6P35125 1406 aa25.51■■□□□ 1.67
PRICKLE1-204ENST00000547113 ZC3H6P61129 1189 aaKnown RBP25.5■■□□□ 1.67
PRICKLE1-204ENST00000547113 ABCA3Q99758 1704 aa25.5■■□□□ 1.67
PRICKLE1-204ENST00000547113 KIAA0232Q92628 1395 aa25.48■■□□□ 1.67
PRICKLE1-204ENST00000547113 ST20-MTHFSA0A0A6YYL1 179 aa25.48■■□□□ 1.67
PRICKLE1-204ENST00000547113 CCER1Q8TC90 406 aaPredicted RBP25.48■■□□□ 1.67
PRICKLE1-204ENST00000547113 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.48■■□□□ 1.67
PRICKLE1-204ENST00000547113 NLRP6P59044 892 aa25.47■■□□□ 1.67
PRICKLE1-204ENST00000547113 PUS7Q96PZ0 661 aaKnown RBP25.47■■□□□ 1.67
PRICKLE1-204ENST00000547113 USP19O94966 1318 aa25.46■■□□□ 1.67
PRICKLE1-204ENST00000547113 GCP02774 474 aa25.46■■□□□ 1.67
PRICKLE1-204ENST00000547113 TMC1Q8TDI8 760 aa25.46■■□□□ 1.67
PRICKLE1-204ENST00000547113 CHRNA2Q15822 529 aa25.45■■□□□ 1.66
PRICKLE1-204ENST00000547113 TTC21BQ7Z4L5 1316 aa25.44■■□□□ 1.66
PRICKLE1-204ENST00000547113 NWD2Q9ULI1 1742 aa25.44■■□□□ 1.66
PRICKLE1-204ENST00000547113 SSH2Q76I76 1423 aa25.44■■□□□ 1.66
PRICKLE1-204ENST00000547113 COL14A1Q05707 1796 aaKnown RBP25.44■■□□□ 1.66
PRICKLE1-204ENST00000547113 TESK2Q96S53 571 aa25.43■■□□□ 1.66
PRICKLE1-204ENST00000547113 KTN1Q86UP2 1357 aaKnown RBP25.43■■□□□ 1.66
PRICKLE1-204ENST00000547113 TTC21AQ8NDW8 1320 aa25.42■■□□□ 1.66
PRICKLE1-204ENST00000547113 ONECUT3O60422 494 aaPredicted RBP25.42■■□□□ 1.66
PRICKLE1-204ENST00000547113 SEPT12Q8IYM1 358 aa25.42■■□□□ 1.66
PRICKLE1-204ENST00000547113 CPSF1Q10570 1443 aaKnown RBP25.42■■□□□ 1.66
PRICKLE1-204ENST00000547113 PLCH1Q4KWH8 1693 aa25.42■■□□□ 1.66
PRICKLE1-204ENST00000547113 GLI3P10071 1580 aa25.41■■□□□ 1.66
PRICKLE1-204ENST00000547113 HDGFL2Q7Z4V5 671 aaPredicted RBP25.41■■□□□ 1.66
PRICKLE1-204ENST00000547113 CPDO75976 1380 aa25.41■■□□□ 1.66
PRICKLE1-204ENST00000547113 CRYBG1Q9Y4K1 1723 aa25.4■■□□□ 1.66
PRICKLE1-204ENST00000547113 SLC12A5Q9H2X9 1139 aa25.4■■□□□ 1.66
PRICKLE1-204ENST00000547113 EVA1CP58658 441 aa25.39■■□□□ 1.66
PRICKLE1-204ENST00000547113 USP47Q96K76 1375 aa25.39■■□□□ 1.65
PRICKLE1-204ENST00000547113 STRN4Q9NRL3 753 aa25.38■■□□□ 1.65
PRICKLE1-204ENST00000547113 TERF2IPQ9NYB0 399 aa25.38■■□□□ 1.65
PRICKLE1-204ENST00000547113 SPATA31A5Q5VU36 1347 aa25.37■■□□□ 1.65
PRICKLE1-204ENST00000547113 SPATA31A7Q8IWB4 1347 aa25.37■■□□□ 1.65
PRICKLE1-204ENST00000547113 PHRF1Q9P1Y6 1649 aaKnown RBP25.37■■□□□ 1.65
PRICKLE1-204ENST00000547113 A0A0G2JS52 829 aa25.37■■□□□ 1.65
PRICKLE1-204ENST00000547113 MYT1Q01538 1121 aa25.37■■□□□ 1.65
PRICKLE1-204ENST00000547113 FAM98CQ17RN3 349 aaKnown RBP25.37■■□□□ 1.65
PRICKLE1-204ENST00000547113 TMF1P82094 1093 aa25.36■■□□□ 1.65
PRICKLE1-204ENST00000547113 KCNH5Q8NCM2 988 aa25.36■■□□□ 1.65
PRICKLE1-204ENST00000547113 ZBTB7CA1YPR0 619 aa25.34■■□□□ 1.65
PRICKLE1-204ENST00000547113 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.34■■□□□ 1.65
PRICKLE1-204ENST00000547113 NRKQ7Z2Y5 1582 aa25.34■■□□□ 1.65
PRICKLE1-204ENST00000547113 NRAPQ86VF7 1730 aa25.33■■□□□ 1.65
PRICKLE1-204ENST00000547113 NINLQ9Y2I6 1382 aa25.32■■□□□ 1.64
PRICKLE1-204ENST00000547113 KRT27Q7Z3Y8 459 aa25.32■■□□□ 1.64
PRICKLE1-204ENST00000547113 CCDC125Q86Z20 511 aa25.32■■□□□ 1.64
PRICKLE1-204ENST00000547113 SPATA31A1Q5TZJ5 1347 aa25.32■■□□□ 1.64
PRICKLE1-204ENST00000547113 CDCA8Q53HL2 280 aa25.31■■□□□ 1.64
PRICKLE1-204ENST00000547113 CD163L1Q9NR16 1453 aa25.3■■□□□ 1.64
PRICKLE1-204ENST00000547113 SLIT3O75094 1523 aa25.3■■□□□ 1.64
PRICKLE1-204ENST00000547113 AATKQ6ZMQ8 1374 aa25.29■■□□□ 1.64
PRICKLE1-204ENST00000547113 AKAP12Q02952 1782 aa25.28■■□□□ 1.64
PRICKLE1-204ENST00000547113 SOX12O15370 315 aa25.28■■□□□ 1.64
PRICKLE1-204ENST00000547113 LARP1Q6PKG0 1096 aaKnown RBP25.28■■□□□ 1.64
PRICKLE1-204ENST00000547113 USP35Q9P2H5 1018 aa25.28■■□□□ 1.64
PRICKLE1-204ENST00000547113 PIK3C2AO00443 1686 aa25.28■■□□□ 1.64
PRICKLE1-204ENST00000547113 A0A1W2PP64 1363 aa25.28■■□□□ 1.64
PRICKLE1-204ENST00000547113 EDC4Q6P2E9 1401 aaKnown RBP25.28■■□□□ 1.64
PRICKLE1-204ENST00000547113 CAMTA1Q9Y6Y1 1673 aa25.27■■□□□ 1.64
PRICKLE1-204ENST00000547113 ARHGEF25Q86VW2 580 aa25.27■■□□□ 1.64
PRICKLE1-204ENST00000547113 NME9Q86XW9 330 aa25.27■■□□□ 1.64
PRICKLE1-204ENST00000547113 USP31Q70CQ4 1352 aa25.27■■□□□ 1.64
PRICKLE1-204ENST00000547113 ZRANB1Q9UGI0 708 aa25.25■■□□□ 1.63
PRICKLE1-204ENST00000547113 BARGINQ6ZT62 677 aa25.24■■□□□ 1.63
PRICKLE1-204ENST00000547113 TCP11L2Q8N4U5 519 aa25.24■■□□□ 1.63
PRICKLE1-204ENST00000547113 THRAP3Q9Y2W1 955 aaKnown RBP25.24■■□□□ 1.63
PRICKLE1-204ENST00000547113 COL5A2P05997 1499 aaPredicted RBP25.21■■□□□ 1.63
PRICKLE1-204ENST00000547113 MON2Q7Z3U7 1717 aa25.21■■□□□ 1.63
PRICKLE1-204ENST00000547113 LMO7Q8WWI1 1683 aa25.21■■□□□ 1.63
PRICKLE1-204ENST00000547113 SF3B2Q13435 895 aaKnown RBP25.21■■□□□ 1.63
PRICKLE1-204ENST00000547113 AXIN2Q9Y2T1 843 aa25.21■■□□□ 1.63
PRICKLE1-204ENST00000547113 ANKRD36BQ8N2N9 1353 aa25.2■■□□□ 1.63
PRICKLE1-204ENST00000547113 TOM1L2Q6ZVM7 507 aa25.2■■□□□ 1.62
PRICKLE1-204ENST00000547113 BLMP54132 1417 aaPredicted RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms