RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 BRINP3Q76B58 766 aa21.53■■□□□ 1.04
TRAFD1-203ENST00000547063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.53■■□□□ 1.04
TRAFD1-203ENST00000547063 CERKQ8TCT0 537 aa21.53■■□□□ 1.04
TRAFD1-203ENST00000547063 SSH2Q76I76 1423 aa21.53■■□□□ 1.04
TRAFD1-203ENST00000547063 PARD3Q8TEW0 1356 aa21.51■■□□□ 1.03
TRAFD1-203ENST00000547063 FYB1O15117 783 aa21.51■■□□□ 1.03
TRAFD1-203ENST00000547063 ANKRD26Q9UPS8 1709 aa21.5■■□□□ 1.03
TRAFD1-203ENST00000547063 KRT28Q7Z3Y7 464 aa21.49■■□□□ 1.03
TRAFD1-203ENST00000547063 MORC1Q86VD1 984 aa21.49■■□□□ 1.03
TRAFD1-203ENST00000547063 CNGB1Q14028 1251 aaPredicted RBP21.48■■□□□ 1.03
TRAFD1-203ENST00000547063 MIER1Q8N108 512 aa21.48■■□□□ 1.03
TRAFD1-203ENST00000547063 PAK3O75914 559 aaPredicted RBP21.47■■□□□ 1.03
TRAFD1-203ENST00000547063 COG3Q96JB2 828 aa21.47■■□□□ 1.03
TRAFD1-203ENST00000547063 SBNO1A3KN83 1393 aa21.47■■□□□ 1.03
TRAFD1-203ENST00000547063 GGNBP2Q9H3C7 697 aa21.46■■□□□ 1.03
TRAFD1-203ENST00000547063 MYBBP1AQ9BQG0 1328 aaKnown RBP21.46■■□□□ 1.03
TRAFD1-203ENST00000547063 ROBO1Q9Y6N7 1651 aa21.45■■□□□ 1.02
TRAFD1-203ENST00000547063 UBAP1LF5GYI3 381 aa21.45■■□□□ 1.02
TRAFD1-203ENST00000547063 NME9Q86XW9 330 aa21.45■■□□□ 1.02
TRAFD1-203ENST00000547063 TRPM3Q9HCF6 1732 aaPredicted RBP21.45■■□□□ 1.02
TRAFD1-203ENST00000547063 USP31Q70CQ4 1352 aa21.45■■□□□ 1.02
TRAFD1-203ENST00000547063 NHSL1Q5SYE7 1610 aa21.44■■□□□ 1.02
TRAFD1-203ENST00000547063 ABTB2Q8N961 1025 aa21.44■■□□□ 1.02
TRAFD1-203ENST00000547063 SCAF1Q9H7N4 1312 aaKnown RBP21.44■■□□□ 1.02
TRAFD1-203ENST00000547063 PXDNQ92626 1479 aa21.44■■□□□ 1.02
TRAFD1-203ENST00000547063 CCER2I3L3R5 266 aa21.43■■□□□ 1.02
TRAFD1-203ENST00000547063 PIK3C2AO00443 1686 aa21.42■■□□□ 1.02
TRAFD1-203ENST00000547063 XPCQ01831 940 aaPredicted RBP21.42■■□□□ 1.02
TRAFD1-203ENST00000547063 SOS2Q07890 1332 aaPredicted RBP21.42■■□□□ 1.02
TRAFD1-203ENST00000547063 USP54Q70EL1 1684 aa21.42■■□□□ 1.02
TRAFD1-203ENST00000547063 OVOS2A0A0J9YW53 1432 aa21.41■■□□□ 1.02
TRAFD1-203ENST00000547063 OVOS2Q6IE36 1432 aa21.41■■□□□ 1.02
TRAFD1-203ENST00000547063 NLRP6P59044 892 aa21.41■■□□□ 1.02
TRAFD1-203ENST00000547063 NLRP13Q86W25 1043 aa21.41■■□□□ 1.02
TRAFD1-203ENST00000547063 AHDC1Q5TGY3 1603 aaPredicted RBP21.4■■□□□ 1.02
TRAFD1-203ENST00000547063 TNS3Q68CZ2 1445 aa21.4■■□□□ 1.02
TRAFD1-203ENST00000547063 ARHGEF10O15013 1369 aa21.4■■□□□ 1.02
TRAFD1-203ENST00000547063 ALS2Q96Q42 1657 aa21.39■■□□□ 1.01
TRAFD1-203ENST00000547063 SPATA31A3Q5VYP0 1347 aa21.38■■□□□ 1.01
TRAFD1-203ENST00000547063 PPP2R1AP30153 589 aa21.38■■□□□ 1.01
TRAFD1-203ENST00000547063 DDX17Q92841 729 aaKnown RBP21.38■■□□□ 1.01
TRAFD1-203ENST00000547063 AATKQ6ZMQ8 1374 aa21.37■■□□□ 1.01
TRAFD1-203ENST00000547063 LMOD2Q6P5Q4 547 aa21.37■■□□□ 1.01
TRAFD1-203ENST00000547063 PIP4K2BP78356 416 aa21.36■■□□□ 1.01
TRAFD1-203ENST00000547063 TNNT2P45379 298 aaPredicted RBP21.35■■□□□ 1.01
TRAFD1-203ENST00000547063 KCNH5Q8NCM2 988 aa21.35■■□□□ 1.01
TRAFD1-203ENST00000547063 ZRANB1Q9UGI0 708 aa21.35■■□□□ 1.01
TRAFD1-203ENST00000547063 LRRC59Q96AG4 307 aaKnown RBP21.34■■□□□ 1.01
TRAFD1-203ENST00000547063 NUTM2GQ5VZR2 741 aa21.33■■□□□ 1.01
TRAFD1-203ENST00000547063 PHLPP1O60346 1717 aa21.32■■□□□ 1
TRAFD1-203ENST00000547063 MARF1Q9Y4F3 1742 aaKnown RBP21.32■■□□□ 1
TRAFD1-203ENST00000547063 USP19O94966 1318 aa21.31■■□□□ 1
TRAFD1-203ENST00000547063 CFAP53Q96M91 514 aa21.31■■□□□ 1
TRAFD1-203ENST00000547063 MRS2Q9HD23 443 aa21.31■■□□□ 1
TRAFD1-203ENST00000547063 MED1Q15648 1581 aaPredicted RBP21.31■■□□□ 1
TRAFD1-203ENST00000547063 MAP2P11137 1827 aaKnown RBP21.3■■□□□ 1
TRAFD1-203ENST00000547063 SLIT3O75094 1523 aa21.29■■□□□ 1
TRAFD1-203ENST00000547063 MTHFSP49914 203 aa21.29■■□□□ 1
TRAFD1-203ENST00000547063 PHF23Q9BUL5 403 aaPredicted RBP21.28■■□□□ 1
TRAFD1-203ENST00000547063 SMG6Q86US8 1419 aaKnown RBP21.28■■□□□ 1
TRAFD1-203ENST00000547063 KIF24Q5T7B8 1368 aa21.27■■□□□ 1
TRAFD1-203ENST00000547063 COL16A1Q07092 1604 aaPredicted RBP21.27■■□□□ 1
TRAFD1-203ENST00000547063 POLKQ9UBT6 870 aa21.27■■□□□ 1
TRAFD1-203ENST00000547063 GCP02774 474 aa21.26■□□□□ 0.99
TRAFD1-203ENST00000547063 CDK12Q9NYV4 1490 aaPredicted RBP21.25■□□□□ 0.99
TRAFD1-203ENST00000547063 NFAT5O94916 1531 aa21.24■□□□□ 0.99
TRAFD1-203ENST00000547063 SOX12O15370 315 aa21.24■□□□□ 0.99
TRAFD1-203ENST00000547063 PHRF1Q9P1Y6 1649 aaKnown RBP21.24■□□□□ 0.99
TRAFD1-203ENST00000547063 INSRP06213 1382 aa21.23■□□□□ 0.99
TRAFD1-203ENST00000547063 PPM1GO15355 546 aaPredicted RBP21.23■□□□□ 0.99
TRAFD1-203ENST00000547063 RRS1Q15050 365 aaKnown RBP21.23■□□□□ 0.99
TRAFD1-203ENST00000547063 CRYBG1Q9Y4K1 1723 aa21.23■□□□□ 0.99
TRAFD1-203ENST00000547063 RTL1A6NKG5 1358 aa21.23■□□□□ 0.99
TRAFD1-203ENST00000547063 COL22A1Q8NFW1 1626 aaPredicted RBP21.22■□□□□ 0.99
TRAFD1-203ENST00000547063 AMPHP49418 695 aa21.22■□□□□ 0.99
TRAFD1-203ENST00000547063 HAP1P54257 671 aaPredicted RBP21.22■□□□□ 0.99
TRAFD1-203ENST00000547063 EMILIN1Q9Y6C2 1016 aa21.22■□□□□ 0.99
TRAFD1-203ENST00000547063 MAP3K19Q56UN5 1328 aa21.22■□□□□ 0.99
TRAFD1-203ENST00000547063 FLT4P35916 1363 aa21.22■□□□□ 0.99
TRAFD1-203ENST00000547063 PNPLA6Q8IY17 1366 aa21.22■□□□□ 0.99
TRAFD1-203ENST00000547063 CCDC184Q52MB2 194 aa21.21■□□□□ 0.99
TRAFD1-203ENST00000547063 FBLN1P23142 703 aa21.2■□□□□ 0.98
TRAFD1-203ENST00000547063 NUDCQ9Y266 331 aa21.2■□□□□ 0.98
TRAFD1-203ENST00000547063 LTN1O94822 1766 aa21.2■□□□□ 0.98
TRAFD1-203ENST00000547063 ARHGEF25Q86VW2 580 aa21.19■□□□□ 0.98
TRAFD1-203ENST00000547063 WDR43Q15061 677 aaKnown RBP eCLIP21.18■□□□□ 0.98
TRAFD1-203ENST00000547063 PNISRQ8TF01 805 aaKnown RBP21.18■□□□□ 0.98
TRAFD1-203ENST00000547063 CPDO75976 1380 aa21.18■□□□□ 0.98
TRAFD1-203ENST00000547063 ABCC6O95255 1503 aa21.18■□□□□ 0.98
TRAFD1-203ENST00000547063 ABCA3Q99758 1704 aa21.18■□□□□ 0.98
TRAFD1-203ENST00000547063 DIAPH1O60610 1272 aaKnown RBP21.17■□□□□ 0.98
TRAFD1-203ENST00000547063 PLEKHG5O94827 1062 aa21.17■□□□□ 0.98
TRAFD1-203ENST00000547063 CABLES1Q8TDN4 633 aa21.17■□□□□ 0.98
TRAFD1-203ENST00000547063 JCADQ9P266 1359 aa21.17■□□□□ 0.98
TRAFD1-203ENST00000547063 SHPRHQ149N8 1683 aa21.17■□□□□ 0.98
TRAFD1-203ENST00000547063 IP6K1Q92551 441 aa21.16■□□□□ 0.98
TRAFD1-203ENST00000547063 COL3A1P02461 1466 aaPredicted RBP21.15■□□□□ 0.98
TRAFD1-203ENST00000547063 HOXC9P31274 260 aa21.15■□□□□ 0.98
TRAFD1-203ENST00000547063 PEAK1Q9H792 1746 aa21.15■□□□□ 0.98
TRAFD1-203ENST00000547063 BLMP54132 1417 aaPredicted RBP21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms