RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 ACEP12821 1306 aa37.82■■■■□ 3.64
SRSF9-202ENST00000546942 NBPF8Q3BBV2 869 aa37.81■■■■□ 3.64
SRSF9-202ENST00000546942 PLCH1Q4KWH8 1693 aa37.8■■■■□ 3.64
SRSF9-202ENST00000546942 FAM83GA6ND36 823 aa37.77■■■■□ 3.64
SRSF9-202ENST00000546942 PLEKHG3A1L390 1219 aa37.76■■■■□ 3.64
SRSF9-202ENST00000546942 TONSLQ96HA7 1378 aa37.76■■■■□ 3.64
SRSF9-202ENST00000546942 NUTM2GQ5VZR2 741 aa37.75■■■■□ 3.63
SRSF9-202ENST00000546942 POLR3AO14802 1390 aaPredicted RBP37.75■■■■□ 3.63
SRSF9-202ENST00000546942 PPIP5K1Q6PFW1 1433 aa37.74■■■■□ 3.63
SRSF9-202ENST00000546942 CCDC9Q9Y3X0 531 aaKnown RBP37.73■■■■□ 3.63
SRSF9-202ENST00000546942 NWD2Q9ULI1 1742 aa37.73■■■■□ 3.63
SRSF9-202ENST00000546942 RALGAPBQ86X10 1494 aa37.72■■■■□ 3.63
SRSF9-202ENST00000546942 GLI3P10071 1580 aa37.7■■■■□ 3.63
SRSF9-202ENST00000546942 CRYBG1Q9Y4K1 1723 aa37.7■■■■□ 3.63
SRSF9-202ENST00000546942 EVC2Q86UK5 1308 aa37.68■■■■□ 3.62
SRSF9-202ENST00000546942 BTG4Q9NY30 223 aa37.68■■■■□ 3.62
SRSF9-202ENST00000546942 VPS72Q15906 364 aa37.67■■■■□ 3.62
SRSF9-202ENST00000546942 CABP1Q9NZU7 370 aa37.67■■■■□ 3.62
SRSF9-202ENST00000546942 ATAD2Q6PL18 1390 aa37.67■■■■□ 3.62
SRSF9-202ENST00000546942 ABTB2Q8N961 1025 aa37.65■■■■□ 3.62
SRSF9-202ENST00000546942 COL14A1Q05707 1796 aaKnown RBP37.65■■■■□ 3.62
SRSF9-202ENST00000546942 CARD11Q9BXL7 1154 aa37.64■■■■□ 3.62
SRSF9-202ENST00000546942 PRDM11Q9NQV5 511 aa37.63■■■■□ 3.61
SRSF9-202ENST00000546942 PHRF1Q9P1Y6 1649 aaKnown RBP37.61■■■■□ 3.61
SRSF9-202ENST00000546942 NRAPQ86VF7 1730 aa37.59■■■■□ 3.61
SRSF9-202ENST00000546942 ZC3H6P61129 1189 aaKnown RBP37.59■■■■□ 3.61
SRSF9-202ENST00000546942 KIAA0232Q92628 1395 aa37.57■■■■□ 3.61
SRSF9-202ENST00000546942 CHRNA2Q15822 529 aa37.57■■■■□ 3.6
SRSF9-202ENST00000546942 BRWD3Q6RI45 1802 aa37.56■■■■□ 3.6
SRSF9-202ENST00000546942 EP400Q96L91 3159 aa37.56■■■■□ 3.6
SRSF9-202ENST00000546942 SEPT12Q8IYM1 358 aa37.55■■■■□ 3.6
SRSF9-202ENST00000546942 A0A0G2JS52 829 aa37.53■■■■□ 3.6
SRSF9-202ENST00000546942 MYT1Q01538 1121 aa37.53■■■■□ 3.6
SRSF9-202ENST00000546942 NLRP13Q86W25 1043 aa37.51■■■■□ 3.6
SRSF9-202ENST00000546942 USP6P35125 1406 aa37.51■■■■□ 3.59
SRSF9-202ENST00000546942 FAM98CQ17RN3 349 aaKnown RBP37.49■■■■□ 3.59
SRSF9-202ENST00000546942 STRN4Q9NRL3 753 aa37.47■■■■□ 3.59
SRSF9-202ENST00000546942 NRKQ7Z2Y5 1582 aa37.46■■■■□ 3.59
SRSF9-202ENST00000546942 BRD4O60885 1362 aaPredicted RBP37.46■■■■□ 3.59
SRSF9-202ENST00000546942 ONECUT3O60422 494 aaPredicted RBP37.46■■■■□ 3.59
SRSF9-202ENST00000546942 USP19O94966 1318 aa37.45■■■■□ 3.59
SRSF9-202ENST00000546942 NLRP6P59044 892 aa37.45■■■■□ 3.59
SRSF9-202ENST00000546942 PCGF6Q9BYE7 350 aa37.43■■■■□ 3.58
SRSF9-202ENST00000546942 SPATA31A5Q5VU36 1347 aa37.42■■■■□ 3.58
SRSF9-202ENST00000546942 SPATA31A7Q8IWB4 1347 aa37.42■■■■□ 3.58
SRSF9-202ENST00000546942 GCP02774 474 aa37.42■■■■□ 3.58
SRSF9-202ENST00000546942 ZBTB7CA1YPR0 619 aa37.41■■■■□ 3.58
SRSF9-202ENST00000546942 AKAP12Q02952 1782 aa37.41■■■■□ 3.58
SRSF9-202ENST00000546942 SBNO2Q9Y2G9 1366 aa37.41■■■■□ 3.58
SRSF9-202ENST00000546942 EVA1CP58658 441 aa37.4■■■■□ 3.58
SRSF9-202ENST00000546942 KRT27Q7Z3Y8 459 aa37.4■■■■□ 3.58
SRSF9-202ENST00000546942 ZNF692Q9BU19 519 aaPredicted RBP37.4■■■■□ 3.58
SRSF9-202ENST00000546942 PIK3C2AO00443 1686 aa37.37■■■■□ 3.57
SRSF9-202ENST00000546942 SSH2Q76I76 1423 aa37.36■■■■□ 3.57
SRSF9-202ENST00000546942 CCDC125Q86Z20 511 aa37.36■■■■□ 3.57
SRSF9-202ENST00000546942 TMC1Q8TDI8 760 aa37.36■■■■□ 3.57
SRSF9-202ENST00000546942 TTC21BQ7Z4L5 1316 aa37.36■■■■□ 3.57
SRSF9-202ENST00000546942 CPDO75976 1380 aa37.35■■■■□ 3.57
SRSF9-202ENST00000546942 KTN1Q86UP2 1357 aaKnown RBP37.35■■■■□ 3.57
SRSF9-202ENST00000546942 USP35Q9P2H5 1018 aa37.35■■■■□ 3.57
SRSF9-202ENST00000546942 CAMTA1Q9Y6Y1 1673 aa37.33■■■■□ 3.57
SRSF9-202ENST00000546942 SPATA31A1Q5TZJ5 1347 aa37.33■■■■□ 3.57
SRSF9-202ENST00000546942 CPSF1Q10570 1443 aaKnown RBP37.31■■■■□ 3.56
SRSF9-202ENST00000546942 ST20-MTHFSA0A0A6YYL1 179 aa37.3■■■■□ 3.56
SRSF9-202ENST00000546942 LMO7Q8WWI1 1683 aa37.29■■■■□ 3.56
SRSF9-202ENST00000546942 LARP1Q6PKG0 1096 aaKnown RBP37.29■■■■□ 3.56
SRSF9-202ENST00000546942 SLIT3O75094 1523 aa37.28■■■■□ 3.56
SRSF9-202ENST00000546942 SOX12O15370 315 aa37.28■■■■□ 3.56
SRSF9-202ENST00000546942 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.27■■■■□ 3.56
SRSF9-202ENST00000546942 TTC21AQ8NDW8 1320 aa37.27■■■■□ 3.56
SRSF9-202ENST00000546942 BLMP54132 1417 aaPredicted RBP37.27■■■■□ 3.56
SRSF9-202ENST00000546942 FAM182BQ5T319 152 aa37.26■■■■□ 3.56
SRSF9-202ENST00000546942 SLC12A5Q9H2X9 1139 aa37.26■■■■□ 3.56
SRSF9-202ENST00000546942 MON2Q7Z3U7 1717 aa37.26■■■■□ 3.56
SRSF9-202ENST00000546942 SF3B2Q13435 895 aaKnown RBP37.25■■■■□ 3.55
SRSF9-202ENST00000546942 THSD7AQ9UPZ6 1657 aa37.25■■■■□ 3.55
SRSF9-202ENST00000546942 HDGFL2Q7Z4V5 671 aaPredicted RBP37.22■■■■□ 3.55
SRSF9-202ENST00000546942 TESK2Q96S53 571 aa37.22■■■■□ 3.55
SRSF9-202ENST00000546942 CD163L1Q9NR16 1453 aa37.2■■■■□ 3.55
SRSF9-202ENST00000546942 ZRANB1Q9UGI0 708 aa37.2■■■■□ 3.55
SRSF9-202ENST00000546942 COL5A2P05997 1499 aaPredicted RBP37.2■■■■□ 3.54
SRSF9-202ENST00000546942 DEFB132Q7Z7B7 95 aa37.19■■■■□ 3.54
SRSF9-202ENST00000546942 KCNH5Q8NCM2 988 aa37.19■■■■□ 3.54
SRSF9-202ENST00000546942 AATKQ6ZMQ8 1374 aa37.18■■■■□ 3.54
SRSF9-202ENST00000546942 TCP11L2Q8N4U5 519 aa37.17■■■■□ 3.54
SRSF9-202ENST00000546942 TERF2IPQ9NYB0 399 aa37.17■■■■□ 3.54
SRSF9-202ENST00000546942 BARGINQ6ZT62 677 aa37.15■■■■□ 3.54
SRSF9-202ENST00000546942 NME9Q86XW9 330 aa37.15■■■■□ 3.54
SRSF9-202ENST00000546942 PUS7Q96PZ0 661 aaKnown RBP37.15■■■■□ 3.54
SRSF9-202ENST00000546942 USP47Q96K76 1375 aa37.15■■■■□ 3.54
SRSF9-202ENST00000546942 COL18A1P39060 1754 aa37.14■■■■□ 3.54
SRSF9-202ENST00000546942 ARHGEF25Q86VW2 580 aa37.13■■■■□ 3.53
SRSF9-202ENST00000546942 AXIN2Q9Y2T1 843 aa37.13■■■■□ 3.53
SRSF9-202ENST00000546942 CLSPNQ9HAW4 1339 aa37.12■■■■□ 3.53
SRSF9-202ENST00000546942 RGPD5Q99666 1765 aa37.12■■■■□ 3.53
SRSF9-202ENST00000546942 A0A1W2PP64 1363 aa37.12■■■■□ 3.53
SRSF9-202ENST00000546942 SLC24A1O60721 1099 aa37.11■■■■□ 3.53
SRSF9-202ENST00000546942 TIMELESSQ9UNS1 1208 aa37.11■■■■□ 3.53
SRSF9-202ENST00000546942 CRB1P82279 1406 aa37.1■■■■□ 3.53
SRSF9-202ENST00000546942 TOM1L2Q6ZVM7 507 aa37.1■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms