RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 STAC3Q96MF2 364 aa16.73■□□□□ 0.27
RAB5C-203ENST00000546881 NRAPQ86VF7 1730 aa16.73■□□□□ 0.27
RAB5C-203ENST00000546881 ARHGEF28Q8N1W1 1705 aaKnown RBP16.73■□□□□ 0.27
RAB5C-203ENST00000546881 COL14A1Q05707 1796 aaKnown RBP16.72■□□□□ 0.27
RAB5C-203ENST00000546881 ONECUT3O60422 494 aaPredicted RBP16.72■□□□□ 0.27
RAB5C-203ENST00000546881 NUDT16Q96DE0 195 aaKnown RBP16.71■□□□□ 0.27
RAB5C-203ENST00000546881 PRDM11Q9NQV5 511 aa16.71■□□□□ 0.27
RAB5C-203ENST00000546881 ITSN1Q15811 1721 aa16.7■□□□□ 0.26
RAB5C-203ENST00000546881 ATP7BP35670 1465 aa16.69■□□□□ 0.26
RAB5C-203ENST00000546881 HRCP23327 699 aa16.69■□□□□ 0.26
RAB5C-203ENST00000546881 NUTM2GQ5VZR2 741 aa16.69■□□□□ 0.26
RAB5C-203ENST00000546881 CDK19Q9BWU1 502 aa16.69■□□□□ 0.26
RAB5C-203ENST00000546881 CRYBG1Q9Y4K1 1723 aa16.67■□□□□ 0.26
RAB5C-203ENST00000546881 BAG6P46379 1132 aa16.67■□□□□ 0.26
RAB5C-203ENST00000546881 CHRNA2Q15822 529 aa16.67■□□□□ 0.26
RAB5C-203ENST00000546881 FAM182BQ5T319 152 aa16.67■□□□□ 0.26
RAB5C-203ENST00000546881 SPATA31A5Q5VU36 1347 aa16.67■□□□□ 0.26
RAB5C-203ENST00000546881 SPATA31A7Q8IWB4 1347 aa16.67■□□□□ 0.26
RAB5C-203ENST00000546881 STRN4Q9NRL3 753 aa16.66■□□□□ 0.26
RAB5C-203ENST00000546881 KIAA0232Q92628 1395 aa16.65■□□□□ 0.26
RAB5C-203ENST00000546881 ZC3H6P61129 1189 aaKnown RBP16.65■□□□□ 0.26
RAB5C-203ENST00000546881 SRCAPQ6ZRS2 3230 aa16.64■□□□□ 0.25
RAB5C-203ENST00000546881 ACEP12821 1306 aa16.64■□□□□ 0.25
RAB5C-203ENST00000546881 PHRF1Q9P1Y6 1649 aaKnown RBP16.63■□□□□ 0.25
RAB5C-203ENST00000546881 PSDA5PKW4 1024 aaPredicted RBP16.63■□□□□ 0.25
RAB5C-203ENST00000546881 SRPK2P78362 688 aaKnown RBP16.62■□□□□ 0.25
RAB5C-203ENST00000546881 EN1Q05925 392 aaPredicted RBP16.62■□□□□ 0.25
RAB5C-203ENST00000546881 NBPF1Q3BBV0 1214 aa16.62■□□□□ 0.25
RAB5C-203ENST00000546881 NBPF8Q3BBV2 869 aa16.62■□□□□ 0.25
RAB5C-203ENST00000546881 USP35Q9P2H5 1018 aa16.62■□□□□ 0.25
RAB5C-203ENST00000546881 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
RAB5C-203ENST00000546881 TOPAZ1Q8N9V7 1692 aa16.62■□□□□ 0.25
RAB5C-203ENST00000546881 KIAA1210Q9ULL0 1709 aa16.62■□□□□ 0.25
RAB5C-203ENST00000546881 EVA1CP58658 441 aa16.61■□□□□ 0.25
RAB5C-203ENST00000546881 ABTB2Q8N961 1025 aa16.61■□□□□ 0.25
RAB5C-203ENST00000546881 SPATA31A1Q5TZJ5 1347 aa16.61■□□□□ 0.25
RAB5C-203ENST00000546881 RGPD1P0DJD0 1748 aa16.61■□□□□ 0.25
RAB5C-203ENST00000546881 POLR3AO14802 1390 aaPredicted RBP16.61■□□□□ 0.25
RAB5C-203ENST00000546881 THSD7AQ9UPZ6 1657 aa16.6■□□□□ 0.25
RAB5C-203ENST00000546881 PLEKHG3A1L390 1219 aa16.58■□□□□ 0.24
RAB5C-203ENST00000546881 CABP2Q9NPB3 220 aa16.58■□□□□ 0.24
RAB5C-203ENST00000546881 CENPJQ9HC77 1338 aaPredicted RBP16.58■□□□□ 0.24
RAB5C-203ENST00000546881 PPIP5K1Q6PFW1 1433 aa16.57■□□□□ 0.24
RAB5C-203ENST00000546881 ZBTB7CA1YPR0 619 aa16.57■□□□□ 0.24
RAB5C-203ENST00000546881 NRKQ7Z2Y5 1582 aa16.56■□□□□ 0.24
RAB5C-203ENST00000546881 SSH2Q76I76 1423 aa16.56■□□□□ 0.24
RAB5C-203ENST00000546881 TRIM37O94972 964 aa16.55■□□□□ 0.24
RAB5C-203ENST00000546881 PDE3BQ13370 1112 aa16.55■□□□□ 0.24
RAB5C-203ENST00000546881 EZH2Q15910 746 aaKnown RBP16.55■□□□□ 0.24
RAB5C-203ENST00000546881 LARP1Q6PKG0 1096 aaKnown RBP16.55■□□□□ 0.24
RAB5C-203ENST00000546881 FAM196AQ6ZSG2 479 aa16.55■□□□□ 0.24
RAB5C-203ENST00000546881 TNS1Q9HBL0 1735 aaKnown RBP16.55■□□□□ 0.24
RAB5C-203ENST00000546881 R3HDM1Q15032 1099 aaKnown RBP16.54■□□□□ 0.24
RAB5C-203ENST00000546881 NLRP13Q86W25 1043 aa16.54■□□□□ 0.24
RAB5C-203ENST00000546881 LRP5O75197 1615 aa16.54■□□□□ 0.24
RAB5C-203ENST00000546881 QRICH2Q9H0J4 1663 aa16.53■□□□□ 0.24
RAB5C-203ENST00000546881 CAMTA1Q9Y6Y1 1673 aa16.53■□□□□ 0.24
RAB5C-203ENST00000546881 USP19O94966 1318 aa16.52■□□□□ 0.24
RAB5C-203ENST00000546881 APBA3O96018 575 aa16.52■□□□□ 0.24
RAB5C-203ENST00000546881 GCP02774 474 aa16.52■□□□□ 0.24
RAB5C-203ENST00000546881 CPDO75976 1380 aa16.51■□□□□ 0.23
RAB5C-203ENST00000546881 BARGINQ6ZT62 677 aa16.51■□□□□ 0.23
RAB5C-203ENST00000546881 TCP11L2Q8N4U5 519 aa16.51■□□□□ 0.23
RAB5C-203ENST00000546881 CABP1Q9NZU7 370 aa16.51■□□□□ 0.23
RAB5C-203ENST00000546881 DISP2A7MBM2 1401 aa16.51■□□□□ 0.23
RAB5C-203ENST00000546881 LMO7Q8WWI1 1683 aa16.5■□□□□ 0.23
RAB5C-203ENST00000546881 NLRP6P59044 892 aa16.5■□□□□ 0.23
RAB5C-203ENST00000546881 L3MBTL2Q969R5 705 aa16.5■□□□□ 0.23
RAB5C-203ENST00000546881 CAMKK2Q96RR4 588 aa16.49■□□□□ 0.23
RAB5C-203ENST00000546881 USP6P35125 1406 aa16.48■□□□□ 0.23
RAB5C-203ENST00000546881 NEUROD1Q13562 356 aa16.48■□□□□ 0.23
RAB5C-203ENST00000546881 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
RAB5C-203ENST00000546881 SIN3AQ96ST3 1273 aa16.47■□□□□ 0.23
RAB5C-203ENST00000546881 BRD4O60885 1362 aaPredicted RBP16.47■□□□□ 0.23
RAB5C-203ENST00000546881 EVC2Q86UK5 1308 aa16.46■□□□□ 0.23
RAB5C-203ENST00000546881 THRAP3Q9Y2W1 955 aaKnown RBP16.46■□□□□ 0.23
RAB5C-203ENST00000546881 TRPM1Q7Z4N2 1603 aa16.45■□□□□ 0.22
RAB5C-203ENST00000546881 CRB1P82279 1406 aa16.45■□□□□ 0.22
RAB5C-203ENST00000546881 ROCK2O75116 1388 aaKnown RBP16.44■□□□□ 0.22
RAB5C-203ENST00000546881 PARD3Q8TEW0 1356 aa16.44■□□□□ 0.22
RAB5C-203ENST00000546881 SOX12O15370 315 aa16.44■□□□□ 0.22
RAB5C-203ENST00000546881 TOM1L2Q6ZVM7 507 aa16.44■□□□□ 0.22
RAB5C-203ENST00000546881 SLIT3O75094 1523 aa16.43■□□□□ 0.22
RAB5C-203ENST00000546881 PIK3C2AO00443 1686 aa16.43■□□□□ 0.22
RAB5C-203ENST00000546881 PARP4Q9UKK3 1724 aaKnown RBP16.42■□□□□ 0.22
RAB5C-203ENST00000546881 AATKQ6ZMQ8 1374 aa16.42■□□□□ 0.22
RAB5C-203ENST00000546881 NBPF14Q5TI25 921 aa16.42■□□□□ 0.22
RAB5C-203ENST00000546881 RREB1Q92766 1687 aa16.41■□□□□ 0.22
RAB5C-203ENST00000546881 NUP188Q5SRE5 1749 aa16.4■□□□□ 0.22
RAB5C-203ENST00000546881 DDB1Q16531 1140 aa16.4■□□□□ 0.22
RAB5C-203ENST00000546881 TTC21BQ7Z4L5 1316 aa16.4■□□□□ 0.22
RAB5C-203ENST00000546881 OVOS2A0A0G2JMS6 1433 aa16.39■□□□□ 0.21
RAB5C-203ENST00000546881 OVOS2A0A0J9YW53 1432 aa16.39■□□□□ 0.21
RAB5C-203ENST00000546881 OVOS2Q6IE36 1432 aa16.39■□□□□ 0.21
RAB5C-203ENST00000546881 CSB-PGBD3P0DP91 1061 aa16.39■□□□□ 0.21
RAB5C-203ENST00000546881 ZNF692Q9BU19 519 aaPredicted RBP16.39■□□□□ 0.21
RAB5C-203ENST00000546881 AXIN2Q9Y2T1 843 aa16.39■□□□□ 0.21
RAB5C-203ENST00000546881 LRRC37A3O60309 1634 aa16.38■□□□□ 0.21
RAB5C-203ENST00000546881 CPSF1Q10570 1443 aaKnown RBP16.38■□□□□ 0.21
RAB5C-203ENST00000546881 KCNH5Q8NCM2 988 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms