RNA–Protein interactions for RNA: ENST00000546584.1

TGFBR1-203, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-203ENST00000546584 MYT1Q01538 1121 aa10.22□□□□□ -0.77
TGFBR1-203ENST00000546584 RSBN1LQ6PCB5 846 aaPredicted RBP10.22□□□□□ -0.77
TGFBR1-203ENST00000546584 RSF1Q96T23 1441 aaPredicted RBP10.22□□□□□ -0.77
TGFBR1-203ENST00000546584 DIXDC1Q155Q3 683 aa10.21□□□□□ -0.77
TGFBR1-203ENST00000546584 PCDHB15Q9Y5E8 787 aa10.21□□□□□ -0.77
TGFBR1-203ENST00000546584 ST8SIA5O15466 376 aa10.2□□□□□ -0.78
TGFBR1-203ENST00000546584 CCNYL3P0C7X3 344 aa10.19□□□□□ -0.78
TGFBR1-203ENST00000546584 ZNF787Q6DD87 383 aa10.19□□□□□ -0.78
TGFBR1-203ENST00000546584 PTCRAQ6ISU1 281 aaPredicted RBP10.19□□□□□ -0.78
TGFBR1-203ENST00000546584 RIC3Q7Z5B4 369 aa10.19□□□□□ -0.78
TGFBR1-203ENST00000546584 MRGPRX2Q96LB1 330 aa10.19□□□□□ -0.78
TGFBR1-203ENST00000546584 IFT140Q96RY7 1462 aa10.18□□□□□ -0.78
TGFBR1-203ENST00000546584 WNT7AO00755 349 aa10.18□□□□□ -0.78
TGFBR1-203ENST00000546584 CABLES1Q8TDN4 633 aa10.18□□□□□ -0.78
TGFBR1-203ENST00000546584 TSC1Q92574 1164 aa10.18□□□□□ -0.78
TGFBR1-203ENST00000546584 TOR4AQ9NXH8 423 aa10.18□□□□□ -0.78
TGFBR1-203ENST00000546584 ZNF608Q9ULD9 1512 aaPredicted RBP10.17□□□□□ -0.78
TGFBR1-203ENST00000546584 SPDYE5A6NIY4 337 aa10.16□□□□□ -0.78
TGFBR1-203ENST00000546584 SPTLC1O15269 473 aa10.16□□□□□ -0.78
TGFBR1-203ENST00000546584 SKOR1P84550 965 aa10.16□□□□□ -0.78
TGFBR1-203ENST00000546584 RC3H1Q5TC82 1133 aaKnown RBP10.16□□□□□ -0.78
TGFBR1-203ENST00000546584 ZBTB3Q9H5J0 574 aa10.16□□□□□ -0.78
TGFBR1-203ENST00000546584 CFAP99D6REC4 459 aa10.15□□□□□ -0.78
TGFBR1-203ENST00000546584 HRCP23327 699 aa10.15□□□□□ -0.78
TGFBR1-203ENST00000546584 PTPRNQ16849 979 aa10.15□□□□□ -0.78
TGFBR1-203ENST00000546584 LINC01559Q495D7 138 aa10.15□□□□□ -0.78
TGFBR1-203ENST00000546584 MYSM1Q5VVJ2 828 aa10.15□□□□□ -0.78
TGFBR1-203ENST00000546584 LIMD1Q9UGP4 676 aa10.15□□□□□ -0.78
TGFBR1-203ENST00000546584 NUTM2BA6NNL0 878 aaPredicted RBP10.14□□□□□ -0.79
TGFBR1-203ENST00000546584 NUTM2EB1AL46 878 aaPredicted RBP10.14□□□□□ -0.79
TGFBR1-203ENST00000546584 CTHP32929 405 aa10.14□□□□□ -0.79
TGFBR1-203ENST00000546584 NUTM2DQ5VT03 806 aaPredicted RBP10.14□□□□□ -0.79
TGFBR1-203ENST00000546584 NUTM2AQ8IVF1 878 aaPredicted RBP10.14□□□□□ -0.79
TGFBR1-203ENST00000546584 SNIP1Q8TAD8 396 aaKnown RBP10.14□□□□□ -0.79
TGFBR1-203ENST00000546584 AAASQ9NRG9 546 aa10.14□□□□□ -0.79
TGFBR1-203ENST00000546584 J3QL48 77 aa10.13□□□□□ -0.79
TGFBR1-203ENST00000546584 GJA5P36382 358 aa10.13□□□□□ -0.79
TGFBR1-203ENST00000546584 WNT7BP56706 349 aa10.13□□□□□ -0.79
TGFBR1-203ENST00000546584 UNC93B1Q9H1C4 597 aa10.13□□□□□ -0.79
TGFBR1-203ENST00000546584 QPCTQ16769 361 aa10.12□□□□□ -0.79
TGFBR1-203ENST00000546584 EHBP1Q8NDI1 1231 aa10.12□□□□□ -0.79
TGFBR1-203ENST00000546584 GPBP1L1Q9HC44 474 aaPredicted RBP10.12□□□□□ -0.79
TGFBR1-203ENST00000546584 POLR3EQ9NVU0 708 aa10.12□□□□□ -0.79
TGFBR1-203ENST00000546584 ATP1B4Q9UN42 357 aaPredicted RBP10.12□□□□□ -0.79
TGFBR1-203ENST00000546584 SMPD1P17405 629 aa10.11□□□□□ -0.79
TGFBR1-203ENST00000546584 KCNH2Q12809 1159 aa10.11□□□□□ -0.79
TGFBR1-203ENST00000546584 EVA1BQ9NVM1 165 aa10.11□□□□□ -0.79
TGFBR1-203ENST00000546584 CHD1O14646 1710 aa10.1□□□□□ -0.79
TGFBR1-203ENST00000546584 EIF4G3O43432 1585 aaKnown RBP10.1□□□□□ -0.79
TGFBR1-203ENST00000546584 POTECB2RU33 542 aa10.1□□□□□ -0.79
TGFBR1-203ENST00000546584 AXIN1O15169 862 aa10.1□□□□□ -0.79
TGFBR1-203ENST00000546584 ALDH1A1P00352 501 aa10.1□□□□□ -0.79
TGFBR1-203ENST00000546584 CLK2P49760 499 aaKnown RBP10.1□□□□□ -0.79
TGFBR1-203ENST00000546584 BAP1Q92560 729 aa10.1□□□□□ -0.79
TGFBR1-203ENST00000546584 SH3BP2P78314 561 aa10.09□□□□□ -0.79
TGFBR1-203ENST00000546584 PRPF38BQ5VTL8 546 aaKnown RBP10.09□□□□□ -0.79
TGFBR1-203ENST00000546584 DESI1Q6ICB0 168 aa10.09□□□□□ -0.79
TGFBR1-203ENST00000546584 KDM4CQ9H3R0 1056 aa10.08□□□□□ -0.8
TGFBR1-203ENST00000546584 MAP10Q9P2G4 905 aa10.08□□□□□ -0.8
TGFBR1-203ENST00000546584 DACH1Q9UI36 760 aa10.08□□□□□ -0.8
TGFBR1-203ENST00000546584 PRDM2Q13029 1718 aa10.07□□□□□ -0.8
TGFBR1-203ENST00000546584 WIZO95785 1651 aa10.07□□□□□ -0.8
TGFBR1-203ENST00000546584 LYPD8Q6UX82 237 aa10.07□□□□□ -0.8
TGFBR1-203ENST00000546584 CLASP1Q7Z460 1538 aa10.07□□□□□ -0.8
TGFBR1-203ENST00000546584 PER1O15534 1290 aaPredicted RBP10.06□□□□□ -0.8
TGFBR1-203ENST00000546584 AVPP01185 164 aa10.06□□□□□ -0.8
TGFBR1-203ENST00000546584 HPS1Q92902 700 aa10.06□□□□□ -0.8
TGFBR1-203ENST00000546584 RSPH6AQ9H0K4 717 aa10.06□□□□□ -0.8
TGFBR1-203ENST00000546584 ZNF511Q8NB15 262 aa10.05□□□□□ -0.8
TGFBR1-203ENST00000546584 TOPBP1Q92547 1522 aa10.04□□□□□ -0.8
TGFBR1-203ENST00000546584 LILRB3O75022 631 aa10.04□□□□□ -0.8
TGFBR1-203ENST00000546584 CTC1Q2NKJ3 1217 aa10.04□□□□□ -0.8
TGFBR1-203ENST00000546584 RTL5Q5HYW3 569 aaPredicted RBP10.04□□□□□ -0.8
TGFBR1-203ENST00000546584 TLL2Q9Y6L7 1015 aa10.04□□□□□ -0.8
TGFBR1-203ENST00000546584 WASF2Q9Y6W5 498 aa10.04□□□□□ -0.8
TGFBR1-203ENST00000546584 ABCC8Q09428 1581 aa10.03□□□□□ -0.8
TGFBR1-203ENST00000546584 CRIPAKQ8N1N5 446 aa10.03□□□□□ -0.8
TGFBR1-203ENST00000546584 HELBQ8NG08 1087 aaPredicted RBP10.03□□□□□ -0.8
TGFBR1-203ENST00000546584 FAM117AQ9C073 453 aa10.03□□□□□ -0.8
TGFBR1-203ENST00000546584 TARBP1Q13395 1621 aaKnown RBP10.03□□□□□ -0.8
TGFBR1-203ENST00000546584 AGERQ15109 404 aa10.02□□□□□ -0.81
TGFBR1-203ENST00000546584 GMPR2Q9P2T1 348 aaKnown RBP10.02□□□□□ -0.81
TGFBR1-203ENST00000546584 F12P00748 615 aaPredicted RBP10.01□□□□□ -0.81
TGFBR1-203ENST00000546584 ZNF775Q96BV0 537 aaPredicted RBP10.01□□□□□ -0.81
TGFBR1-203ENST00000546584 SIAH2O43255 324 aa10□□□□□ -0.81
TGFBR1-203ENST00000546584 TUSC1Q2TAM9 212 aa10□□□□□ -0.81
TGFBR1-203ENST00000546584 SMCPP49901 116 aaPredicted RBP9.99□□□□□ -0.81
TGFBR1-203ENST00000546584 FOXJ1Q92949 421 aa9.99□□□□□ -0.81
TGFBR1-203ENST00000546584 DDRGK1Q96HY6 314 aa9.99□□□□□ -0.81
TGFBR1-203ENST00000546584 AQRO60306 1485 aaKnown RBP eCLIP9.98□□□□□ -0.81
TGFBR1-203ENST00000546584 C11orf95C9JLR9 678 aaPredicted RBP9.98□□□□□ -0.81
TGFBR1-203ENST00000546584 PROCA1Q8NCQ7 364 aaPredicted RBP9.98□□□□□ -0.81
TGFBR1-203ENST00000546584 ATP13A2Q9NQ11 1180 aa9.98□□□□□ -0.81
TGFBR1-203ENST00000546584 DNMBPQ6XZF7 1577 aa9.97□□□□□ -0.81
TGFBR1-203ENST00000546584 VARSP26640 1264 aaKnown RBP9.97□□□□□ -0.81
TGFBR1-203ENST00000546584 ARID5BQ14865 1188 aa9.97□□□□□ -0.81
TGFBR1-203ENST00000546584 TOP2AP11388 1531 aaKnown RBP9.97□□□□□ -0.81
TGFBR1-203ENST00000546584 WDR97A6NE52 1622 aa9.96□□□□□ -0.81
TGFBR1-203ENST00000546584 SUPT5HO00267 1087 aaKnown RBP9.96□□□□□ -0.82
TGFBR1-203ENST00000546584 SKIV2LQ15477 1246 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms