RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 TRPM1Q7Z4N2 1603 aa27.09■■□□□ 1.93
CHPT1-202ENST00000546490 CDK19Q9BWU1 502 aa27.09■■□□□ 1.93
CHPT1-202ENST00000546490 CCDC9Q9Y3X0 531 aaKnown RBP27.09■■□□□ 1.93
CHPT1-202ENST00000546490 FAM83GA6ND36 823 aa27.07■■□□□ 1.92
CHPT1-202ENST00000546490 NBPF1Q3BBV0 1214 aa27.07■■□□□ 1.92
CHPT1-202ENST00000546490 CCDC125Q86Z20 511 aa27.07■■□□□ 1.92
CHPT1-202ENST00000546490 POLR3AO14802 1390 aaPredicted RBP27.07■■□□□ 1.92
CHPT1-202ENST00000546490 SEPT12Q8IYM1 358 aa27.04■■□□□ 1.92
CHPT1-202ENST00000546490 BTG4Q9NY30 223 aa27.04■■□□□ 1.92
CHPT1-202ENST00000546490 CENPJQ9HC77 1338 aaPredicted RBP27.04■■□□□ 1.92
CHPT1-202ENST00000546490 BLMP54132 1417 aaPredicted RBP27.03■■□□□ 1.92
CHPT1-202ENST00000546490 CCDC61Q9Y6R9 512 aa27.03■■□□□ 1.92
CHPT1-202ENST00000546490 NRKQ7Z2Y5 1582 aa27.02■■□□□ 1.92
CHPT1-202ENST00000546490 ACEP12821 1306 aa27.01■■□□□ 1.91
CHPT1-202ENST00000546490 PRDM11Q9NQV5 511 aa27■■□□□ 1.91
CHPT1-202ENST00000546490 PPIP5K1Q6PFW1 1433 aa26.99■■□□□ 1.91
CHPT1-202ENST00000546490 ONECUT3O60422 494 aaPredicted RBP26.99■■□□□ 1.91
CHPT1-202ENST00000546490 THSD7AQ9UPZ6 1657 aa26.98■■□□□ 1.91
CHPT1-202ENST00000546490 A0A0G2JS52 829 aa26.98■■□□□ 1.91
CHPT1-202ENST00000546490 PLEKHG3A1L390 1219 aa26.98■■□□□ 1.91
CHPT1-202ENST00000546490 SRPK2P78362 688 aaKnown RBP26.98■■□□□ 1.91
CHPT1-202ENST00000546490 MYT1Q01538 1121 aa26.98■■□□□ 1.91
CHPT1-202ENST00000546490 L3MBTL2Q969R5 705 aa26.98■■□□□ 1.91
CHPT1-202ENST00000546490 KIAA0232Q92628 1395 aa26.97■■□□□ 1.91
CHPT1-202ENST00000546490 NBPF8Q3BBV2 869 aa26.96■■□□□ 1.91
CHPT1-202ENST00000546490 KRT27Q7Z3Y8 459 aa26.96■■□□□ 1.91
CHPT1-202ENST00000546490 RGPD1P0DJD0 1748 aa26.94■■□□□ 1.9
CHPT1-202ENST00000546490 FAM98CQ17RN3 349 aaKnown RBP26.94■■□□□ 1.9
CHPT1-202ENST00000546490 SPATA31A5Q5VU36 1347 aa26.92■■□□□ 1.9
CHPT1-202ENST00000546490 SPATA31A7Q8IWB4 1347 aa26.92■■□□□ 1.9
CHPT1-202ENST00000546490 SF3B2Q13435 895 aaKnown RBP26.92■■□□□ 1.9
CHPT1-202ENST00000546490 NUTM2GQ5VZR2 741 aa26.92■■□□□ 1.9
CHPT1-202ENST00000546490 SIN3AQ96ST3 1273 aa26.92■■□□□ 1.9
CHPT1-202ENST00000546490 ZRANB1Q9UGI0 708 aa26.92■■□□□ 1.9
CHPT1-202ENST00000546490 LMO7Q8WWI1 1683 aa26.92■■□□□ 1.9
CHPT1-202ENST00000546490 ROCK2O75116 1388 aaKnown RBP26.91■■□□□ 1.9
CHPT1-202ENST00000546490 BRD4O60885 1362 aaPredicted RBP26.9■■□□□ 1.9
CHPT1-202ENST00000546490 ABTB2Q8N961 1025 aa26.9■■□□□ 1.9
CHPT1-202ENST00000546490 CABP2Q9NPB3 220 aa26.9■■□□□ 1.9
CHPT1-202ENST00000546490 AKAP12Q02952 1782 aa26.89■■□□□ 1.89
CHPT1-202ENST00000546490 NEUROD1Q13562 356 aa26.88■■□□□ 1.89
CHPT1-202ENST00000546490 CHRNA2Q15822 529 aa26.88■■□□□ 1.89
CHPT1-202ENST00000546490 USP19O94966 1318 aa26.88■■□□□ 1.89
CHPT1-202ENST00000546490 SRCAPQ6ZRS2 3230 aa26.87■■□□□ 1.89
CHPT1-202ENST00000546490 ZC3H6P61129 1189 aaKnown RBP26.87■■□□□ 1.89
CHPT1-202ENST00000546490 USP6P35125 1406 aa26.87■■□□□ 1.89
CHPT1-202ENST00000546490 CPDO75976 1380 aa26.86■■□□□ 1.89
CHPT1-202ENST00000546490 PIK3C2AO00443 1686 aa26.86■■□□□ 1.89
CHPT1-202ENST00000546490 TNS1Q9HBL0 1735 aaKnown RBP26.86■■□□□ 1.89
CHPT1-202ENST00000546490 EVC2Q86UK5 1308 aa26.86■■□□□ 1.89
CHPT1-202ENST00000546490 SPATA31A1Q5TZJ5 1347 aa26.85■■□□□ 1.89
CHPT1-202ENST00000546490 SSH2Q76I76 1423 aa26.84■■□□□ 1.89
CHPT1-202ENST00000546490 STRN4Q9NRL3 753 aa26.84■■□□□ 1.89
CHPT1-202ENST00000546490 CAMTA1Q9Y6Y1 1673 aa26.83■■□□□ 1.89
CHPT1-202ENST00000546490 DEFB132Q7Z7B7 95 aa26.83■■□□□ 1.89
CHPT1-202ENST00000546490 NLRP13Q86W25 1043 aa26.83■■□□□ 1.89
CHPT1-202ENST00000546490 SLIT3O75094 1523 aa26.82■■□□□ 1.88
CHPT1-202ENST00000546490 CABP1Q9NZU7 370 aa26.81■■□□□ 1.88
CHPT1-202ENST00000546490 BAG6P46379 1132 aa26.78■■□□□ 1.88
CHPT1-202ENST00000546490 MON2Q7Z3U7 1717 aa26.78■■□□□ 1.88
CHPT1-202ENST00000546490 PARP4Q9UKK3 1724 aaKnown RBP26.77■■□□□ 1.88
CHPT1-202ENST00000546490 GCP02774 474 aa26.77■■□□□ 1.88
CHPT1-202ENST00000546490 EVA1CP58658 441 aa26.77■■□□□ 1.88
CHPT1-202ENST00000546490 COL5A2P05997 1499 aaPredicted RBP26.76■■□□□ 1.87
CHPT1-202ENST00000546490 WNK3Q9BYP7 1800 aa26.75■■□□□ 1.87
CHPT1-202ENST00000546490 SBNO2Q9Y2G9 1366 aa26.74■■□□□ 1.87
CHPT1-202ENST00000546490 USP35Q9P2H5 1018 aa26.74■■□□□ 1.87
CHPT1-202ENST00000546490 NLRP6P59044 892 aa26.73■■□□□ 1.87
CHPT1-202ENST00000546490 FAM182BQ5T319 152 aa26.73■■□□□ 1.87
CHPT1-202ENST00000546490 COL18A1P39060 1754 aa26.73■■□□□ 1.87
CHPT1-202ENST00000546490 DISP2A7MBM2 1401 aa26.73■■□□□ 1.87
CHPT1-202ENST00000546490 TONSLQ96HA7 1378 aa26.72■■□□□ 1.87
CHPT1-202ENST00000546490 BARGINQ6ZT62 677 aa26.72■■□□□ 1.87
CHPT1-202ENST00000546490 LARP1Q6PKG0 1096 aaKnown RBP26.71■■□□□ 1.87
CHPT1-202ENST00000546490 LRP5O75197 1615 aa26.7■■□□□ 1.86
CHPT1-202ENST00000546490 RGPD5Q99666 1765 aa26.69■■□□□ 1.86
CHPT1-202ENST00000546490 CRB1P82279 1406 aa26.69■■□□□ 1.86
CHPT1-202ENST00000546490 TCP11L2Q8N4U5 519 aa26.69■■□□□ 1.86
CHPT1-202ENST00000546490 USP54Q70EL1 1684 aa26.69■■□□□ 1.86
CHPT1-202ENST00000546490 AATKQ6ZMQ8 1374 aa26.69■■□□□ 1.86
CHPT1-202ENST00000546490 ZBTB7CA1YPR0 619 aa26.68■■□□□ 1.86
CHPT1-202ENST00000546490 ZNF692Q9BU19 519 aaPredicted RBP26.68■■□□□ 1.86
CHPT1-202ENST00000546490 THRAP3Q9Y2W1 955 aaKnown RBP26.68■■□□□ 1.86
CHPT1-202ENST00000546490 LRRC37A3O60309 1634 aa26.68■■□□□ 1.86
CHPT1-202ENST00000546490 CPSF1Q10570 1443 aaKnown RBP26.67■■□□□ 1.86
CHPT1-202ENST00000546490 FAM196AQ6ZSG2 479 aa26.67■■□□□ 1.86
CHPT1-202ENST00000546490 CARD11Q9BXL7 1154 aa26.67■■□□□ 1.86
CHPT1-202ENST00000546490 TTC21AQ8NDW8 1320 aa26.66■■□□□ 1.86
CHPT1-202ENST00000546490 TTC21BQ7Z4L5 1316 aa26.65■■□□□ 1.86
CHPT1-202ENST00000546490 PDE3BQ13370 1112 aa26.65■■□□□ 1.86
CHPT1-202ENST00000546490 KTN1Q86UP2 1357 aaKnown RBP26.65■■□□□ 1.86
CHPT1-202ENST00000546490 RREB1Q92766 1687 aa26.65■■□□□ 1.86
CHPT1-202ENST00000546490 EN1Q05925 392 aaPredicted RBP26.64■■□□□ 1.86
CHPT1-202ENST00000546490 NFAT5O94916 1531 aa26.64■■□□□ 1.85
CHPT1-202ENST00000546490 ABCC6O95255 1503 aa26.63■■□□□ 1.85
CHPT1-202ENST00000546490 TRIM37O94972 964 aa26.61■■□□□ 1.85
CHPT1-202ENST00000546490 KCNH5Q8NCM2 988 aa26.61■■□□□ 1.85
CHPT1-202ENST00000546490 LTN1O94822 1766 aa26.61■■□□□ 1.85
CHPT1-202ENST00000546490 PEAK1Q9H792 1746 aa26.6■■□□□ 1.85
CHPT1-202ENST00000546490 SBF2Q86WG5 1849 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms