RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 FAM184AQ8NB25 1140 aa12.73□□□□□ -0.37
SSH1-203ENST00000546433 FOXD4L1Q9NU39 408 aa12.73□□□□□ -0.37
SSH1-203ENST00000546433 TPM3P06753 285 aa12.72□□□□□ -0.37
SSH1-203ENST00000546433 IDI1Q13907 227 aa12.72□□□□□ -0.37
SSH1-203ENST00000546433 TOMM22Q9NS69 142 aa12.72□□□□□ -0.37
SSH1-203ENST00000546433 GPATCH8Q9UKJ3 1502 aaKnown RBP12.72□□□□□ -0.37
SSH1-203ENST00000546433 XPCQ01831 940 aaPredicted RBP12.72□□□□□ -0.37
SSH1-203ENST00000546433 RBM42Q9BTD8 480 aaKnown RBP12.72□□□□□ -0.37
SSH1-203ENST00000546433 FANCIQ9NVI1 1328 aa12.71□□□□□ -0.37
SSH1-203ENST00000546433 COG6Q9Y2V7 657 aa12.71□□□□□ -0.37
SSH1-203ENST00000546433 DDX58O95786 925 aaKnown RBP12.71□□□□□ -0.37
SSH1-203ENST00000546433 NOL10Q9BSC4 688 aaKnown RBP12.71□□□□□ -0.37
SSH1-203ENST00000546433 PTPN23Q9H3S7 1636 aa12.71□□□□□ -0.37
SSH1-203ENST00000546433 CPLX2Q6PUV4 134 aaKnown RBP12.71□□□□□ -0.37
SSH1-203ENST00000546433 CERKQ8TCT0 537 aa12.71□□□□□ -0.37
SSH1-203ENST00000546433 EXOC5O00471 708 aa12.71□□□□□ -0.38
SSH1-203ENST00000546433 PTPRKQ15262 1439 aa12.71□□□□□ -0.38
SSH1-203ENST00000546433 BAG6P46379 1132 aa12.7□□□□□ -0.38
SSH1-203ENST00000546433 KIF6Q6ZMV9 814 aa12.7□□□□□ -0.38
SSH1-203ENST00000546433 MAP3K1Q13233 1512 aa12.7□□□□□ -0.38
SSH1-203ENST00000546433 DISP3Q9P2K9 1392 aa12.7□□□□□ -0.38
SSH1-203ENST00000546433 ZKSCAN1P17029 563 aaPredicted RBP12.7□□□□□ -0.38
SSH1-203ENST00000546433 GNAI1P63096 354 aa12.7□□□□□ -0.38
SSH1-203ENST00000546433 CFAP70Q5T0N1 1121 aa12.7□□□□□ -0.38
SSH1-203ENST00000546433 C16orf71Q8IYS4 520 aaPredicted RBP12.7□□□□□ -0.38
SSH1-203ENST00000546433 BCL2L13Q9BXK5 485 aa12.7□□□□□ -0.38
SSH1-203ENST00000546433 TRIM34Q9BYJ4 488 aa12.7□□□□□ -0.38
SSH1-203ENST00000546433 DDX49Q9Y6V7 483 aaKnown RBP12.7□□□□□ -0.38
SSH1-203ENST00000546433 SYNE3Q6ZMZ3 975 aa12.7□□□□□ -0.38
SSH1-203ENST00000546433 CWC22Q9HCG8 908 aaKnown RBP12.7□□□□□ -0.38
SSH1-203ENST00000546433 PLIN1O60240 522 aa12.7□□□□□ -0.38
SSH1-203ENST00000546433 RIPK4P57078 832 aa12.7□□□□□ -0.38
SSH1-203ENST00000546433 AKAP17AQ02040 695 aaKnown RBP12.7□□□□□ -0.38
SSH1-203ENST00000546433 DDX54Q8TDD1 881 aaKnown RBP12.7□□□□□ -0.38
SSH1-203ENST00000546433 MAGI3Q5TCQ9 1506 aa12.7□□□□□ -0.38
SSH1-203ENST00000546433 BRD4O60885 1362 aaPredicted RBP12.7□□□□□ -0.38
SSH1-203ENST00000546433 HSP90AB4PQ58FF6 505 aa12.69□□□□□ -0.38
SSH1-203ENST00000546433 CABP4P57796 275 aa12.69□□□□□ -0.38
SSH1-203ENST00000546433 ELL2O00472 640 aaPredicted RBP12.69□□□□□ -0.38
SSH1-203ENST00000546433 C9orf78Q9NZ63 289 aaPredicted RBP12.69□□□□□ -0.38
SSH1-203ENST00000546433 MAPKBP1O60336 1514 aa12.69□□□□□ -0.38
SSH1-203ENST00000546433 GOLGA6L19H0YKK7 550 aa12.69□□□□□ -0.38
SSH1-203ENST00000546433 ATP7AQ04656 1500 aa12.69□□□□□ -0.38
SSH1-203ENST00000546433 KIF7Q2M1P5 1343 aa12.68□□□□□ -0.38
SSH1-203ENST00000546433 MARCH6O60337 910 aa12.68□□□□□ -0.38
SSH1-203ENST00000546433 NUDT16Q96DE0 195 aaKnown RBP12.68□□□□□ -0.38
SSH1-203ENST00000546433 RNF20Q5VTR2 975 aa12.68□□□□□ -0.38
SSH1-203ENST00000546433 GSE1Q14687 1217 aa12.67□□□□□ -0.38
SSH1-203ENST00000546433 TPM2P07951 284 aa12.67□□□□□ -0.38
SSH1-203ENST00000546433 GAS2L2Q8NHY3 880 aa12.67□□□□□ -0.38
SSH1-203ENST00000546433 IFIT2P09913 472 aaKnown RBP12.67□□□□□ -0.38
SSH1-203ENST00000546433 AMOTL1Q8IY63 956 aa12.67□□□□□ -0.38
SSH1-203ENST00000546433 ZCCHC11Q5TAX3 1644 aaKnown RBP12.67□□□□□ -0.38
SSH1-203ENST00000546433 TPM1P09493 284 aa12.67□□□□□ -0.38
SSH1-203ENST00000546433 TSR1Q2NL82 804 aaKnown RBP12.67□□□□□ -0.38
SSH1-203ENST00000546433 CHMP5Q9NZZ3 219 aa12.66□□□□□ -0.38
SSH1-203ENST00000546433 CCDC61Q9Y6R9 512 aa12.66□□□□□ -0.38
SSH1-203ENST00000546433 TPD52L1Q16890 204 aaPredicted RBP12.66□□□□□ -0.38
SSH1-203ENST00000546433 INTS3Q68E01 1043 aaKnown RBP12.66□□□□□ -0.38
SSH1-203ENST00000546433 ZC3H6P61129 1189 aaKnown RBP12.66□□□□□ -0.38
SSH1-203ENST00000546433 ABCC5O15440 1437 aa12.66□□□□□ -0.38
SSH1-203ENST00000546433 BECN2A8MW95 431 aa12.66□□□□□ -0.38
SSH1-203ENST00000546433 FOXO3O43524 673 aa12.66□□□□□ -0.38
SSH1-203ENST00000546433 CDCA7Q9BWT1 371 aaPredicted RBP12.66□□□□□ -0.38
SSH1-203ENST00000546433 TBX22Q9Y458 520 aa12.66□□□□□ -0.38
SSH1-203ENST00000546433 CLASP1Q7Z460 1538 aa12.66□□□□□ -0.38
SSH1-203ENST00000546433 RXRBP28702 533 aa12.65□□□□□ -0.38
SSH1-203ENST00000546433 CEP89Q96ST8 783 aa12.65□□□□□ -0.38
SSH1-203ENST00000546433 FBXW7Q969H0 707 aa12.65□□□□□ -0.38
SSH1-203ENST00000546433 NPHP4O75161 1426 aaPredicted RBP12.65□□□□□ -0.38
SSH1-203ENST00000546433 TRIM29Q14134 588 aa12.65□□□□□ -0.38
SSH1-203ENST00000546433 STK32BQ9NY57 414 aa12.65□□□□□ -0.39
SSH1-203ENST00000546433 ERC2O15083 957 aa12.64□□□□□ -0.39
SSH1-203ENST00000546433 G3BP1Q13283 466 aaKnown RBP eCLIP12.64□□□□□ -0.39
SSH1-203ENST00000546433 FOXD4L5Q5VV16 416 aaPredicted RBP12.64□□□□□ -0.39
SSH1-203ENST00000546433 FOXD4L4Q8WXT5 416 aaPredicted RBP12.64□□□□□ -0.39
SSH1-203ENST00000546433 AK7Q96M32 723 aa12.64□□□□□ -0.39
SSH1-203ENST00000546433 NUCB2P80303 420 aa12.63□□□□□ -0.39
SSH1-203ENST00000546433 RSPH6AQ9H0K4 717 aa12.63□□□□□ -0.39
SSH1-203ENST00000546433 ANO2Q9NQ90 1003 aa12.63□□□□□ -0.39
SSH1-203ENST00000546433 WDHD1O75717 1129 aaPredicted RBP12.63□□□□□ -0.39
SSH1-203ENST00000546433 HOOK1Q9UJC3 728 aaKnown RBP12.63□□□□□ -0.39
SSH1-203ENST00000546433 EIF2S2P20042 333 aaKnown RBP12.63□□□□□ -0.39
SSH1-203ENST00000546433 A0A0U1RQG5 324 aaPredicted RBP12.63□□□□□ -0.39
SSH1-203ENST00000546433 FKBP5Q13451 457 aaPredicted RBP12.63□□□□□ -0.39
SSH1-203ENST00000546433 CCDC47Q96A33 483 aaKnown RBP12.63□□□□□ -0.39
SSH1-203ENST00000546433 CTDP1Q9Y5B0 961 aaPredicted RBP12.63□□□□□ -0.39
SSH1-203ENST00000546433 CREBRFQ8IUR6 639 aa12.62□□□□□ -0.39
SSH1-203ENST00000546433 USP21Q9UK80 565 aa12.62□□□□□ -0.39
SSH1-203ENST00000546433 ZRANB1Q9UGI0 708 aa12.62□□□□□ -0.39
SSH1-203ENST00000546433 NCOA1Q15788 1441 aa12.62□□□□□ -0.39
SSH1-203ENST00000546433 PNISRQ8TF01 805 aaKnown RBP12.62□□□□□ -0.39
SSH1-203ENST00000546433 TMOD3Q9NYL9 352 aa12.62□□□□□ -0.39
SSH1-203ENST00000546433 ZPR1O75312 459 aa12.62□□□□□ -0.39
SSH1-203ENST00000546433 ZNF652Q9Y2D9 606 aa12.62□□□□□ -0.39
SSH1-203ENST00000546433 TSPYL4Q9UJ04 414 aa12.61□□□□□ -0.39
SSH1-203ENST00000546433 WASLO00401 505 aaPredicted RBP12.61□□□□□ -0.39
SSH1-203ENST00000546433 CABP1Q9NZU7 370 aa12.61□□□□□ -0.39
SSH1-203ENST00000546433 ABCA8O94911 1581 aa12.61□□□□□ -0.39
SSH1-203ENST00000546433 TRDNQ13061 729 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms