RNA–Protein interactions for RNA: ENST00000545600.1

TM7SF3-219, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 4

Gene TM7SF3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-219ENST00000545600 USP21Q9UK80 565 aa35.27■■■■□ 3.24
TM7SF3-219ENST00000545600 BCL9LQ86UU0 1499 aa35.25■■■■□ 3.23
TM7SF3-219ENST00000545600 HAP1P54257 671 aaPredicted RBP35.25■■■■□ 3.23
TM7SF3-219ENST00000545600 QTRT2Q9H974 415 aaKnown RBP35.25■■■■□ 3.23
TM7SF3-219ENST00000545600 RXRBP28702 533 aa35.23■■■■□ 3.23
TM7SF3-219ENST00000545600 SLIT2O94813 1529 aa35.21■■■■□ 3.23
TM7SF3-219ENST00000545600 NUTM2GQ5VZR2 741 aa35.2■■■■□ 3.23
TM7SF3-219ENST00000545600 TIMELESSQ9UNS1 1208 aa35.2■■■■□ 3.23
TM7SF3-219ENST00000545600 ATRNO75882 1429 aa35.19■■■■□ 3.22
TM7SF3-219ENST00000545600 ST20-MTHFSA0A0A6YYL1 179 aa35.17■■■■□ 3.22
TM7SF3-219ENST00000545600 PLCH1Q4KWH8 1693 aa35.17■■■■□ 3.22
TM7SF3-219ENST00000545600 USP6P35125 1406 aa35.16■■■■□ 3.22
TM7SF3-219ENST00000545600 TESK2Q96S53 571 aa35.16■■■■□ 3.22
TM7SF3-219ENST00000545600 PHRF1Q9P1Y6 1649 aaKnown RBP35.16■■■■□ 3.22
TM7SF3-219ENST00000545600 ATAD2Q6PL18 1390 aa35.15■■■■□ 3.22
TM7SF3-219ENST00000545600 TRPC5Q9UL62 973 aaPredicted RBP35.15■■■■□ 3.22
TM7SF3-219ENST00000545600 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.15■■■■□ 3.22
TM7SF3-219ENST00000545600 RBM6P78332 1123 aaKnown RBP35.14■■■■□ 3.22
TM7SF3-219ENST00000545600 FAM83GA6ND36 823 aa35.13■■■■□ 3.21
TM7SF3-219ENST00000545600 CDK12Q9NYV4 1490 aaPredicted RBP35.13■■■■□ 3.21
TM7SF3-219ENST00000545600 RGS12O14924 1447 aa35.13■■■■□ 3.21
TM7SF3-219ENST00000545600 USP47Q96K76 1375 aa35.13■■■■□ 3.21
TM7SF3-219ENST00000545600 SSH2Q76I76 1423 aa35.12■■■■□ 3.21
TM7SF3-219ENST00000545600 AKAP12Q02952 1782 aa35.11■■■■□ 3.21
TM7SF3-219ENST00000545600 ABTB2Q8N961 1025 aa35.11■■■■□ 3.21
TM7SF3-219ENST00000545600 UNC5CLQ8IV45 518 aa35.09■■■■□ 3.21
TM7SF3-219ENST00000545600 NWD2Q9ULI1 1742 aa35.08■■■■□ 3.21
TM7SF3-219ENST00000545600 CPSF1Q10570 1443 aaKnown RBP35.07■■■■□ 3.21
TM7SF3-219ENST00000545600 NRKQ7Z2Y5 1582 aa35.07■■■■□ 3.2
TM7SF3-219ENST00000545600 BRD4O60885 1362 aaPredicted RBP35.06■■■■□ 3.2
TM7SF3-219ENST00000545600 COL14A1Q05707 1796 aaKnown RBP35.05■■■■□ 3.2
TM7SF3-219ENST00000545600 PIK3C2AO00443 1686 aa35.05■■■■□ 3.2
TM7SF3-219ENST00000545600 CD163L1Q9NR16 1453 aa35.05■■■■□ 3.2
TM7SF3-219ENST00000545600 NRAPQ86VF7 1730 aa35.05■■■■□ 3.2
TM7SF3-219ENST00000545600 USP19O94966 1318 aa35.05■■■■□ 3.2
TM7SF3-219ENST00000545600 GLI3P10071 1580 aa35.04■■■■□ 3.2
TM7SF3-219ENST00000545600 KIAA0232Q92628 1395 aa35.03■■■■□ 3.2
TM7SF3-219ENST00000545600 GJD4Q96KN9 370 aaPredicted RBP35.02■■■■□ 3.2
TM7SF3-219ENST00000545600 MON2Q7Z3U7 1717 aa35.01■■■■□ 3.2
TM7SF3-219ENST00000545600 ZC3H6P61129 1189 aaKnown RBP35■■■■□ 3.19
TM7SF3-219ENST00000545600 TMC1Q8TDI8 760 aa35■■■■□ 3.19
TM7SF3-219ENST00000545600 SLC12A5Q9H2X9 1139 aa35■■■■□ 3.19
TM7SF3-219ENST00000545600 BTG4Q9NY30 223 aa35■■■■□ 3.19
TM7SF3-219ENST00000545600 TTC21BQ7Z4L5 1316 aa35■■■■□ 3.19
TM7SF3-219ENST00000545600 KTN1Q86UP2 1357 aaKnown RBP35■■■■□ 3.19
TM7SF3-219ENST00000545600 ZNF692Q9BU19 519 aaPredicted RBP34.99■■■■□ 3.19
TM7SF3-219ENST00000545600 PRDM11Q9NQV5 511 aa34.99■■■■□ 3.19
TM7SF3-219ENST00000545600 CHRNA2Q15822 529 aa34.98■■■■□ 3.19
TM7SF3-219ENST00000545600 NLRP13Q86W25 1043 aa34.98■■■■□ 3.19
TM7SF3-219ENST00000545600 NLRP6P59044 892 aa34.96■■■■□ 3.19
TM7SF3-219ENST00000545600 PUS7Q96PZ0 661 aaKnown RBP34.96■■■■□ 3.19
TM7SF3-219ENST00000545600 VPS72Q15906 364 aa34.95■■■■□ 3.19
TM7SF3-219ENST00000545600 SLIT3O75094 1523 aa34.95■■■■□ 3.19
TM7SF3-219ENST00000545600 GCP02774 474 aa34.93■■■■□ 3.18
TM7SF3-219ENST00000545600 A0A1W2PP64 1363 aa34.91■■■■□ 3.18
TM7SF3-219ENST00000545600 TTC21AQ8NDW8 1320 aa34.9■■■■□ 3.18
TM7SF3-219ENST00000545600 CCDC9Q9Y3X0 531 aaKnown RBP34.9■■■■□ 3.18
TM7SF3-219ENST00000545600 CPDO75976 1380 aa34.89■■■■□ 3.18
TM7SF3-219ENST00000545600 TMF1P82094 1093 aa34.89■■■■□ 3.18
TM7SF3-219ENST00000545600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.88■■■■□ 3.17
TM7SF3-219ENST00000545600 LMO7Q8WWI1 1683 aa34.88■■■■□ 3.17
TM7SF3-219ENST00000545600 HDGFL2Q7Z4V5 671 aaPredicted RBP34.87■■■■□ 3.17
TM7SF3-219ENST00000545600 ZRANB1Q9UGI0 708 aa34.87■■■■□ 3.17
TM7SF3-219ENST00000545600 SLC24A1O60721 1099 aa34.86■■■■□ 3.17
TM7SF3-219ENST00000545600 CAMTA1Q9Y6Y1 1673 aa34.86■■■■□ 3.17
TM7SF3-219ENST00000545600 NME9Q86XW9 330 aa34.84■■■■□ 3.17
TM7SF3-219ENST00000545600 EDC4Q6P2E9 1401 aaKnown RBP34.83■■■■□ 3.17
TM7SF3-219ENST00000545600 UPF1Q92900 1129 aaKnown RBP eCLIP34.83■■■■□ 3.17
TM7SF3-219ENST00000545600 TERF2IPQ9NYB0 399 aa34.83■■■■□ 3.17
TM7SF3-219ENST00000545600 NINLQ9Y2I6 1382 aa34.83■■■■□ 3.17
TM7SF3-219ENST00000545600 STRN4Q9NRL3 753 aa34.81■■■■□ 3.16
TM7SF3-219ENST00000545600 ZBTB7CA1YPR0 619 aa34.8■■■■□ 3.16
TM7SF3-219ENST00000545600 SPATA31A5Q5VU36 1347 aa34.8■■■■□ 3.16
TM7SF3-219ENST00000545600 SPATA31A7Q8IWB4 1347 aa34.8■■■■□ 3.16
TM7SF3-219ENST00000545600 USP54Q70EL1 1684 aa34.79■■■■□ 3.16
TM7SF3-219ENST00000545600 SOX12O15370 315 aa34.79■■■■□ 3.16
TM7SF3-219ENST00000545600 BRWD3Q6RI45 1802 aa34.78■■■■□ 3.16
TM7SF3-219ENST00000545600 USP31Q70CQ4 1352 aa34.78■■■■□ 3.16
TM7SF3-219ENST00000545600 NFAT5O94916 1531 aa34.78■■■■□ 3.16
TM7SF3-219ENST00000545600 SEPT12Q8IYM1 358 aa34.78■■■■□ 3.16
TM7SF3-219ENST00000545600 ONECUT3O60422 494 aaPredicted RBP34.76■■■■□ 3.16
TM7SF3-219ENST00000545600 FAM98CQ17RN3 349 aaKnown RBP34.76■■■■□ 3.16
TM7SF3-219ENST00000545600 MYOM1P52179 1685 aa34.76■■■■□ 3.15
TM7SF3-219ENST00000545600 ANKRD36BQ8N2N9 1353 aa34.75■■■■□ 3.15
TM7SF3-219ENST00000545600 COL18A1P39060 1754 aa34.75■■■■□ 3.15
TM7SF3-219ENST00000545600 HSPA5P11021 654 aaKnown RBP34.75■■■■□ 3.15
TM7SF3-219ENST00000545600 COL5A2P05997 1499 aaPredicted RBP34.74■■■■□ 3.15
TM7SF3-219ENST00000545600 SPATA31A1Q5TZJ5 1347 aa34.73■■■■□ 3.15
TM7SF3-219ENST00000545600 AATKQ6ZMQ8 1374 aa34.73■■■■□ 3.15
TM7SF3-219ENST00000545600 EIF4G2P78344 907 aaKnown RBP eCLIP34.72■■■■□ 3.15
TM7SF3-219ENST00000545600 LARP1Q6PKG0 1096 aaKnown RBP34.72■■■■□ 3.15
TM7SF3-219ENST00000545600 KCNH5Q8NCM2 988 aa34.72■■■■□ 3.15
TM7SF3-219ENST00000545600 CDCA8Q53HL2 280 aa34.71■■■■□ 3.15
TM7SF3-219ENST00000545600 ARHGEF25Q86VW2 580 aa34.71■■■■□ 3.15
TM7SF3-219ENST00000545600 OVOS2A0A0J9YW53 1432 aa34.71■■■■□ 3.15
TM7SF3-219ENST00000545600 OVOS2Q6IE36 1432 aa34.71■■■■□ 3.15
TM7SF3-219ENST00000545600 EVA1CP58658 441 aa34.7■■■■□ 3.15
TM7SF3-219ENST00000545600 AXIN2Q9Y2T1 843 aa34.69■■■■□ 3.14
TM7SF3-219ENST00000545600 THSD7AQ9UPZ6 1657 aa34.69■■■■□ 3.14
TM7SF3-219ENST00000545600 USP35Q9P2H5 1018 aa34.68■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms