RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 ANKRD26Q9UPS8 1709 aa24.4■■□□□ 1.5
MSLN-202ENST00000545450 ZNF521Q96K83 1311 aa24.39■■□□□ 1.49
MSLN-202ENST00000545450 ATP7BP35670 1465 aa24.38■■□□□ 1.49
MSLN-202ENST00000545450 NFKBIBQ15653 356 aa24.38■■□□□ 1.49
MSLN-202ENST00000545450 ANO8Q9HCE9 1232 aaPredicted RBP24.38■■□□□ 1.49
MSLN-202ENST00000545450 KIF20BQ96Q89 1820 aa24.38■■□□□ 1.49
MSLN-202ENST00000545450 XRN1Q8IZH2 1706 aaKnown RBP24.38■■□□□ 1.49
MSLN-202ENST00000545450 TNNT2P45379 298 aaPredicted RBP24.37■■□□□ 1.49
MSLN-202ENST00000545450 GSE1Q14687 1217 aa24.37■■□□□ 1.49
MSLN-202ENST00000545450 FAM161AQ3B820 660 aa24.37■■□□□ 1.49
MSLN-202ENST00000545450 AMOTL2Q9Y2J4 779 aa24.37■■□□□ 1.49
MSLN-202ENST00000545450 HDGFL2Q7Z4V5 671 aaPredicted RBP24.36■■□□□ 1.49
MSLN-202ENST00000545450 PPIP5K1Q6PFW1 1433 aa24.36■■□□□ 1.49
MSLN-202ENST00000545450 PTCH1Q13635 1447 aa24.35■■□□□ 1.49
MSLN-202ENST00000545450 WDR43Q15061 677 aaKnown RBP eCLIP24.35■■□□□ 1.49
MSLN-202ENST00000545450 C8orf34Q49A92 452 aa24.35■■□□□ 1.49
MSLN-202ENST00000545450 POLR3AO14802 1390 aaPredicted RBP24.34■■□□□ 1.49
MSLN-202ENST00000545450 SHPRHQ149N8 1683 aa24.34■■□□□ 1.49
MSLN-202ENST00000545450 NUDT16Q96DE0 195 aaKnown RBP24.33■■□□□ 1.49
MSLN-202ENST00000545450 NCKAP5LQ9HCH0 1330 aa24.33■■□□□ 1.49
MSLN-202ENST00000545450 GOLGA2Q08379 1002 aa24.32■■□□□ 1.48
MSLN-202ENST00000545450 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.32■■□□□ 1.48
MSLN-202ENST00000545450 GGNBP2Q9H3C7 697 aa24.32■■□□□ 1.48
MSLN-202ENST00000545450 PRR36Q9H6K5 1346 aa24.32■■□□□ 1.48
MSLN-202ENST00000545450 FYB1O15117 783 aa24.32■■□□□ 1.48
MSLN-202ENST00000545450 CPSF1Q10570 1443 aaKnown RBP24.32■■□□□ 1.48
MSLN-202ENST00000545450 CDC42BPGQ6DT37 1551 aa24.32■■□□□ 1.48
MSLN-202ENST00000545450 RTN4Q9NQC3 1192 aaKnown RBP24.32■■□□□ 1.48
MSLN-202ENST00000545450 AKAP12Q02952 1782 aa24.31■■□□□ 1.48
MSLN-202ENST00000545450 SLC4A3P48751 1232 aa24.31■■□□□ 1.48
MSLN-202ENST00000545450 ANKLE2Q86XL3 938 aa24.31■■□□□ 1.48
MSLN-202ENST00000545450 TOPAZ1Q8N9V7 1692 aa24.31■■□□□ 1.48
MSLN-202ENST00000545450 ITSN1Q15811 1721 aa24.31■■□□□ 1.48
MSLN-202ENST00000545450 MON2Q7Z3U7 1717 aa24.31■■□□□ 1.48
MSLN-202ENST00000545450 DAXXQ9UER7 740 aaPredicted RBP24.3■■□□□ 1.48
MSLN-202ENST00000545450 CCDC61Q9Y6R9 512 aa24.29■■□□□ 1.48
MSLN-202ENST00000545450 CHD2O14647 1828 aaKnown RBP24.28■■□□□ 1.48
MSLN-202ENST00000545450 SLFN5Q08AF3 891 aa24.28■■□□□ 1.48
MSLN-202ENST00000545450 PIK3R4Q99570 1358 aa24.28■■□□□ 1.48
MSLN-202ENST00000545450 MTHFSP49914 203 aa24.27■■□□□ 1.48
MSLN-202ENST00000545450 TRMT2AQ8IZ69 625 aaKnown RBP24.27■■□□□ 1.48
MSLN-202ENST00000545450 EDC4Q6P2E9 1401 aaKnown RBP24.25■■□□□ 1.47
MSLN-202ENST00000545450 KCNA6P17658 529 aa24.25■■□□□ 1.47
MSLN-202ENST00000545450 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.25■■□□□ 1.47
MSLN-202ENST00000545450 RGPD8O14715 1765 aaPredicted RBP24.23■■□□□ 1.47
MSLN-202ENST00000545450 FRAT1Q92837 279 aaPredicted RBP24.23■■□□□ 1.47
MSLN-202ENST00000545450 BRPF3Q9ULD4 1205 aa24.23■■□□□ 1.47
MSLN-202ENST00000545450 NUTM2FA1L443 756 aa24.22■■□□□ 1.47
MSLN-202ENST00000545450 CCDC146Q8IYE0 955 aa24.22■■□□□ 1.47
MSLN-202ENST00000545450 NKTRP30414 1462 aaKnown RBP24.21■■□□□ 1.47
MSLN-202ENST00000545450 PRKCSHP14314 528 aaPredicted RBP24.19■■□□□ 1.46
MSLN-202ENST00000545450 NRKQ7Z2Y5 1582 aa24.19■■□□□ 1.46
MSLN-202ENST00000545450 NPHP4O75161 1426 aaPredicted RBP24.18■■□□□ 1.46
MSLN-202ENST00000545450 CFAP53Q96M91 514 aa24.18■■□□□ 1.46
MSLN-202ENST00000545450 RGS3P49796 1198 aa24.18■■□□□ 1.46
MSLN-202ENST00000545450 MAP2P11137 1827 aaKnown RBP24.17■■□□□ 1.46
MSLN-202ENST00000545450 COL3A1P02461 1466 aaPredicted RBP24.17■■□□□ 1.46
MSLN-202ENST00000545450 NALCNQ8IZF0 1738 aa24.16■■□□□ 1.46
MSLN-202ENST00000545450 NME9Q86XW9 330 aa24.16■■□□□ 1.46
MSLN-202ENST00000545450 PLEKHG3A1L390 1219 aa24.15■■□□□ 1.46
MSLN-202ENST00000545450 SPINK5Q9NQ38 1064 aaPredicted RBP24.15■■□□□ 1.46
MSLN-202ENST00000545450 FMN2Q9NZ56 1722 aa24.15■■□□□ 1.46
MSLN-202ENST00000545450 ZNF692Q9BU19 519 aaPredicted RBP24.15■■□□□ 1.46
MSLN-202ENST00000545450 ACEP12821 1306 aa24.14■■□□□ 1.46
MSLN-202ENST00000545450 APAF1O14727 1248 aa24.13■■□□□ 1.45
MSLN-202ENST00000545450 FRAT2O75474 233 aaPredicted RBP24.13■■□□□ 1.45
MSLN-202ENST00000545450 ZRANB1Q9UGI0 708 aa24.13■■□□□ 1.45
MSLN-202ENST00000545450 E9PSI1 815 aa24.12■■□□□ 1.45
MSLN-202ENST00000545450 FBLN1P23142 703 aa24.12■■□□□ 1.45
MSLN-202ENST00000545450 BCAR3O75815 825 aa24.11■■□□□ 1.45
MSLN-202ENST00000545450 USP6P35125 1406 aa24.11■■□□□ 1.45
MSLN-202ENST00000545450 NGEFQ8N5V2 710 aa24.1■■□□□ 1.45
MSLN-202ENST00000545450 USP19O94966 1318 aa24.09■■□□□ 1.45
MSLN-202ENST00000545450 PNPLA6Q8IY17 1366 aa24.09■■□□□ 1.45
MSLN-202ENST00000545450 IGHDP01880 384 aa24.08■■□□□ 1.45
MSLN-202ENST00000545450 IQSEC2Q5JU85 1478 aa24.08■■□□□ 1.45
MSLN-202ENST00000545450 PDE3AQ14432 1141 aa24.08■■□□□ 1.44
MSLN-202ENST00000545450 PMFBP1Q8TBY8 1022 aa24.08■■□□□ 1.44
MSLN-202ENST00000545450 TTC21BQ7Z4L5 1316 aa24.08■■□□□ 1.44
MSLN-202ENST00000545450 ANKARQ7Z5J8 1434 aa24.07■■□□□ 1.44
MSLN-202ENST00000545450 RBM33Q96EV2 1170 aaKnown RBP24.07■■□□□ 1.44
MSLN-202ENST00000545450 POLKQ9UBT6 870 aa24.07■■□□□ 1.44
MSLN-202ENST00000545450 NWD1Q149M9 1564 aa24.06■■□□□ 1.44
MSLN-202ENST00000545450 SSH2Q76I76 1423 aa24.06■■□□□ 1.44
MSLN-202ENST00000545450 COG3Q96JB2 828 aa24.06■■□□□ 1.44
MSLN-202ENST00000545450 U2AF1L5P0DN76 240 aaPredicted RBP24.05■■□□□ 1.44
MSLN-202ENST00000545450 U2AF1Q01081 240 aaKnown RBP eCLIP24.05■■□□□ 1.44
MSLN-202ENST00000545450 RUNDC1Q96C34 613 aa24.05■■□□□ 1.44
MSLN-202ENST00000545450 MAPK8IP3Q9UPT6 1336 aa24.04■■□□□ 1.44
MSLN-202ENST00000545450 AATKQ6ZMQ8 1374 aa24.03■■□□□ 1.44
MSLN-202ENST00000545450 VIRMAQ69YN4 1812 aaKnown RBP24.03■■□□□ 1.44
MSLN-202ENST00000545450 OVOS2A0A0J9YW53 1432 aa24.03■■□□□ 1.44
MSLN-202ENST00000545450 OVOS2Q6IE36 1432 aa24.03■■□□□ 1.44
MSLN-202ENST00000545450 DMRT2Q9Y5R5 561 aa24.02■■□□□ 1.44
MSLN-202ENST00000545450 EMILIN1Q9Y6C2 1016 aa24.02■■□□□ 1.44
MSLN-202ENST00000545450 ADGRL3Q9HAR2 1447 aa24.02■■□□□ 1.44
MSLN-202ENST00000545450 U2SURPO15042 1029 aaKnown RBP24.01■■□□□ 1.43
MSLN-202ENST00000545450 DIAPH1O60610 1272 aaKnown RBP24.01■■□□□ 1.43
MSLN-202ENST00000545450 NGDNQ8NEJ9 315 aaKnown RBP24.01■■□□□ 1.43
MSLN-202ENST00000545450 CLUAP1Q96AJ1 413 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms