RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 ROCK2O75116 1388 aaKnown RBP16.78■□□□□ 0.28
LTBR-214ENST00000545445 GPRASP1Q5JY77 1395 aa16.78■□□□□ 0.28
LTBR-214ENST00000545445 BTG4Q9NY30 223 aa16.78■□□□□ 0.28
LTBR-214ENST00000545445 RGPD1P0DJD0 1748 aa16.78■□□□□ 0.28
LTBR-214ENST00000545445 TRPM1Q7Z4N2 1603 aa16.78■□□□□ 0.28
LTBR-214ENST00000545445 NBPF1Q3BBV0 1214 aa16.77■□□□□ 0.28
LTBR-214ENST00000545445 ADGRB1O14514 1584 aa16.77■□□□□ 0.27
LTBR-214ENST00000545445 DISP2A7MBM2 1401 aa16.76■□□□□ 0.27
LTBR-214ENST00000545445 RGPD8O14715 1765 aaPredicted RBP16.76■□□□□ 0.27
LTBR-214ENST00000545445 SAFB2Q14151 953 aaKnown RBP eCLIP16.75■□□□□ 0.27
LTBR-214ENST00000545445 EZH2Q15910 746 aaKnown RBP16.75■□□□□ 0.27
LTBR-214ENST00000545445 PMFBP1Q8TBY8 1022 aa16.75■□□□□ 0.27
LTBR-214ENST00000545445 SIRT1Q96EB6 747 aa16.75■□□□□ 0.27
LTBR-214ENST00000545445 TNS1Q9HBL0 1735 aaKnown RBP16.75■□□□□ 0.27
LTBR-214ENST00000545445 CARD11Q9BXL7 1154 aa16.74■□□□□ 0.27
LTBR-214ENST00000545445 SPATA31A5Q5VU36 1347 aa16.72■□□□□ 0.27
LTBR-214ENST00000545445 SPATA31A7Q8IWB4 1347 aa16.72■□□□□ 0.27
LTBR-214ENST00000545445 THSD7AQ9UPZ6 1657 aa16.72■□□□□ 0.27
LTBR-214ENST00000545445 COL14A1Q05707 1796 aaKnown RBP16.72■□□□□ 0.27
LTBR-214ENST00000545445 PRAM1Q96QH2 718 aa16.72■□□□□ 0.27
LTBR-214ENST00000545445 ADGRB2O60241 1585 aa16.71■□□□□ 0.27
LTBR-214ENST00000545445 ANKARQ7Z5J8 1434 aa16.7■□□□□ 0.26
LTBR-214ENST00000545445 DLC1Q96QB1 1528 aa16.7■□□□□ 0.26
LTBR-214ENST00000545445 TRPM3Q9HCF6 1732 aaPredicted RBP16.7■□□□□ 0.26
LTBR-214ENST00000545445 EIF3AQ14152 1382 aaKnown RBP16.7■□□□□ 0.26
LTBR-214ENST00000545445 YY1P25490 414 aa16.7■□□□□ 0.26
LTBR-214ENST00000545445 TRAK1Q9UPV9 953 aa16.7■□□□□ 0.26
LTBR-214ENST00000545445 TRIM37O94972 964 aa16.69■□□□□ 0.26
LTBR-214ENST00000545445 CAMKK2Q96RR4 588 aa16.69■□□□□ 0.26
LTBR-214ENST00000545445 ALS2Q96Q42 1657 aa16.68■□□□□ 0.26
LTBR-214ENST00000545445 SLC24A1O60721 1099 aa16.66■□□□□ 0.26
LTBR-214ENST00000545445 PRDM11Q9NQV5 511 aa16.66■□□□□ 0.26
LTBR-214ENST00000545445 POGKQ9P215 609 aa16.66■□□□□ 0.26
LTBR-214ENST00000545445 APBA3O96018 575 aa16.65■□□□□ 0.26
LTBR-214ENST00000545445 HIRIP3Q9BW71 556 aaPredicted RBP16.65■□□□□ 0.26
LTBR-214ENST00000545445 PRR36Q9H6K5 1346 aa16.65■□□□□ 0.26
LTBR-214ENST00000545445 PARD3Q8TEW0 1356 aa16.64■□□□□ 0.26
LTBR-214ENST00000545445 EIF4G2P78344 907 aaKnown RBP eCLIP16.64■□□□□ 0.25
LTBR-214ENST00000545445 CRYBG1Q9Y4K1 1723 aa16.64■□□□□ 0.25
LTBR-214ENST00000545445 SPATA31A1Q5TZJ5 1347 aa16.64■□□□□ 0.25
LTBR-214ENST00000545445 CENPJQ9HC77 1338 aaPredicted RBP16.64■□□□□ 0.25
LTBR-214ENST00000545445 USP47Q96K76 1375 aa16.64■□□□□ 0.25
LTBR-214ENST00000545445 FAM196AQ6ZSG2 479 aa16.63■□□□□ 0.25
LTBR-214ENST00000545445 KIAA0232Q92628 1395 aa16.63■□□□□ 0.25
LTBR-214ENST00000545445 PAK3O75914 559 aaPredicted RBP16.62■□□□□ 0.25
LTBR-214ENST00000545445 CHRNA2Q15822 529 aa16.62■□□□□ 0.25
LTBR-214ENST00000545445 STRN4Q9NRL3 753 aa16.62■□□□□ 0.25
LTBR-214ENST00000545445 RREB1Q92766 1687 aa16.62■□□□□ 0.25
LTBR-214ENST00000545445 TULP4Q9NRJ4 1543 aa16.61■□□□□ 0.25
LTBR-214ENST00000545445 MINK1Q8N4C8 1332 aaPredicted RBP16.61■□□□□ 0.25
LTBR-214ENST00000545445 NUP188Q5SRE5 1749 aa16.61■□□□□ 0.25
LTBR-214ENST00000545445 ARHGEF28Q8N1W1 1705 aaKnown RBP16.61■□□□□ 0.25
LTBR-214ENST00000545445 SBNO2Q9Y2G9 1366 aa16.61■□□□□ 0.25
LTBR-214ENST00000545445 USP35Q9P2H5 1018 aa16.6■□□□□ 0.25
LTBR-214ENST00000545445 ST20-MTHFSA0A0A6YYL1 179 aa16.59■□□□□ 0.25
LTBR-214ENST00000545445 NGDNQ8NEJ9 315 aaKnown RBP16.59■□□□□ 0.25
LTBR-214ENST00000545445 PPP1R1BQ9UD71 204 aaPredicted RBP16.59■□□□□ 0.25
LTBR-214ENST00000545445 NBPF14Q5TI25 921 aa16.57■□□□□ 0.24
LTBR-214ENST00000545445 PHRF1Q9P1Y6 1649 aaKnown RBP16.56■□□□□ 0.24
LTBR-214ENST00000545445 SSH2Q76I76 1423 aa16.56■□□□□ 0.24
LTBR-214ENST00000545445 HSPA5P11021 654 aaKnown RBP16.56■□□□□ 0.24
LTBR-214ENST00000545445 ZC3H6P61129 1189 aaKnown RBP16.56■□□□□ 0.24
LTBR-214ENST00000545445 PDE3BQ13370 1112 aa16.56■□□□□ 0.24
LTBR-214ENST00000545445 SPON1Q9HCB6 807 aa16.56■□□□□ 0.24
LTBR-214ENST00000545445 NINLQ9Y2I6 1382 aa16.55■□□□□ 0.24
LTBR-214ENST00000545445 WASLO00401 505 aaPredicted RBP16.55■□□□□ 0.24
LTBR-214ENST00000545445 NUTM2GQ5VZR2 741 aa16.55■□□□□ 0.24
LTBR-214ENST00000545445 EVC2Q86UK5 1308 aa16.54■□□□□ 0.24
LTBR-214ENST00000545445 TESK2Q96S53 571 aa16.54■□□□□ 0.24
LTBR-214ENST00000545445 KCNQ2O43526 872 aa16.53■□□□□ 0.24
LTBR-214ENST00000545445 BARGINQ6ZT62 677 aa16.53■□□□□ 0.24
LTBR-214ENST00000545445 QRICH2Q9H0J4 1663 aa16.53■□□□□ 0.24
LTBR-214ENST00000545445 DCAF8L1A6NGE4 600 aa16.52■□□□□ 0.24
LTBR-214ENST00000545445 EVA1CP58658 441 aa16.52■□□□□ 0.24
LTBR-214ENST00000545445 TMF1P82094 1093 aa16.52■□□□□ 0.24
LTBR-214ENST00000545445 CDCA8Q53HL2 280 aa16.52■□□□□ 0.24
LTBR-214ENST00000545445 LARP1Q6PKG0 1096 aaKnown RBP16.52■□□□□ 0.24
LTBR-214ENST00000545445 PUS7Q96PZ0 661 aaKnown RBP16.52■□□□□ 0.24
LTBR-214ENST00000545445 ATP7BP35670 1465 aa16.52■□□□□ 0.23
LTBR-214ENST00000545445 CAMTA1Q9Y6Y1 1673 aa16.52■□□□□ 0.23
LTBR-214ENST00000545445 NRKQ7Z2Y5 1582 aa16.51■□□□□ 0.23
LTBR-214ENST00000545445 TCP11L2Q8N4U5 519 aa16.5■□□□□ 0.23
LTBR-214ENST00000545445 CDK19Q9BWU1 502 aa16.49■□□□□ 0.23
LTBR-214ENST00000545445 NUDT16Q96DE0 195 aaKnown RBP16.48■□□□□ 0.23
LTBR-214ENST00000545445 ANO8Q9HCE9 1232 aaPredicted RBP16.48■□□□□ 0.23
LTBR-214ENST00000545445 LMO7Q8WWI1 1683 aa16.47■□□□□ 0.23
LTBR-214ENST00000545445 SRPK2P78362 688 aaKnown RBP16.47■□□□□ 0.23
LTBR-214ENST00000545445 ITSN1Q15811 1721 aa16.47■□□□□ 0.23
LTBR-214ENST00000545445 PDGFDQ9GZP0 370 aaPredicted RBP16.45■□□□□ 0.22
LTBR-214ENST00000545445 CPDO75976 1380 aa16.45■□□□□ 0.22
LTBR-214ENST00000545445 OVOS2A0A0G2JMS6 1433 aa16.45■□□□□ 0.22
LTBR-214ENST00000545445 OVOS2A0A0J9YW53 1432 aa16.45■□□□□ 0.22
LTBR-214ENST00000545445 OVOS2Q6IE36 1432 aa16.45■□□□□ 0.22
LTBR-214ENST00000545445 ZNF784Q8NCA9 323 aaPredicted RBP16.44■□□□□ 0.22
LTBR-214ENST00000545445 CCDC61Q9Y6R9 512 aa16.44■□□□□ 0.22
LTBR-214ENST00000545445 PARP4Q9UKK3 1724 aaKnown RBP16.44■□□□□ 0.22
LTBR-214ENST00000545445 USP19O94966 1318 aa16.44■□□□□ 0.22
LTBR-214ENST00000545445 ACEP12821 1306 aa16.44■□□□□ 0.22
LTBR-214ENST00000545445 CASZ1Q86V15 1759 aa16.43■□□□□ 0.22
LTBR-214ENST00000545445 COL5A2P05997 1499 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms