RNA–Protein interactions for RNA: ENST00000545367.5

NPIPB4-221, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-221ENST00000545367 ALS2Q96Q42 1657 aa13.11□□□□□ -0.31
NPIPB4-221ENST00000545367 PLEKHH1Q9ULM0 1364 aa13.1□□□□□ -0.31
NPIPB4-221ENST00000545367 CAMTA1Q9Y6Y1 1673 aa13.1□□□□□ -0.31
NPIPB4-221ENST00000545367 VPS72Q15906 364 aa13.1□□□□□ -0.31
NPIPB4-221ENST00000545367 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
NPIPB4-221ENST00000545367 DISP2A7MBM2 1401 aa13.09□□□□□ -0.31
NPIPB4-221ENST00000545367 R3HDM1Q15032 1099 aaKnown RBP13.09□□□□□ -0.31
NPIPB4-221ENST00000545367 RRBP1Q9P2E9 1410 aaKnown RBP13.09□□□□□ -0.31
NPIPB4-221ENST00000545367 VGFO15240 615 aaPredicted RBP13.08□□□□□ -0.32
NPIPB4-221ENST00000545367 CABLES1Q8TDN4 633 aa13.08□□□□□ -0.32
NPIPB4-221ENST00000545367 NRXN1Q9ULB1 1477 aa13.08□□□□□ -0.32
NPIPB4-221ENST00000545367 EN1Q05925 392 aaPredicted RBP13.07□□□□□ -0.32
NPIPB4-221ENST00000545367 PHRF1Q9P1Y6 1649 aaKnown RBP13.06□□□□□ -0.32
NPIPB4-221ENST00000545367 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
NPIPB4-221ENST00000545367 STK26Q9P289 416 aa13.06□□□□□ -0.32
NPIPB4-221ENST00000545367 YY1P25490 414 aa13.05□□□□□ -0.32
NPIPB4-221ENST00000545367 FAM98CQ17RN3 349 aaKnown RBP13.05□□□□□ -0.32
NPIPB4-221ENST00000545367 FAM182BQ5T319 152 aa13.05□□□□□ -0.32
NPIPB4-221ENST00000545367 WAPLQ7Z5K2 1190 aa13.05□□□□□ -0.32
NPIPB4-221ENST00000545367 ARHGEF10O15013 1369 aa13.05□□□□□ -0.32
NPIPB4-221ENST00000545367 LMOD2Q6P5Q4 547 aa13.03□□□□□ -0.32
NPIPB4-221ENST00000545367 KRT28Q7Z3Y7 464 aa13.03□□□□□ -0.32
NPIPB4-221ENST00000545367 PIK3C2GO75747 1445 aa13.03□□□□□ -0.32
NPIPB4-221ENST00000545367 ONECUT3O60422 494 aaPredicted RBP13.02□□□□□ -0.33
NPIPB4-221ENST00000545367 RPGRIP1LQ68CZ1 1315 aa13.02□□□□□ -0.33
NPIPB4-221ENST00000545367 SBNO1A3KN83 1393 aa13.02□□□□□ -0.33
NPIPB4-221ENST00000545367 YTHDC2Q9H6S0 1430 aaKnown RBP13.02□□□□□ -0.33
NPIPB4-221ENST00000545367 ADGRF5Q8IZF2 1346 aa13.01□□□□□ -0.33
NPIPB4-221ENST00000545367 ITSN1Q15811 1721 aa13.01□□□□□ -0.33
NPIPB4-221ENST00000545367 NRKQ7Z2Y5 1582 aa13□□□□□ -0.33
NPIPB4-221ENST00000545367 PHF8Q9UPP1 1060 aa13□□□□□ -0.33
NPIPB4-221ENST00000545367 MYOM1P52179 1685 aa12.99□□□□□ -0.33
NPIPB4-221ENST00000545367 ABCC11Q96J66 1382 aa12.99□□□□□ -0.33
NPIPB4-221ENST00000545367 EZH2Q15910 746 aaKnown RBP12.99□□□□□ -0.33
NPIPB4-221ENST00000545367 RGPD3A6NKT7 1758 aaPredicted RBP12.99□□□□□ -0.33
NPIPB4-221ENST00000545367 RGPD4Q7Z3J3 1758 aa12.99□□□□□ -0.33
NPIPB4-221ENST00000545367 CASZ1Q86V15 1759 aa12.99□□□□□ -0.33
NPIPB4-221ENST00000545367 FAM83GA6ND36 823 aa12.98□□□□□ -0.33
NPIPB4-221ENST00000545367 FKBP8Q14318 412 aa12.98□□□□□ -0.33
NPIPB4-221ENST00000545367 BTG4Q9NY30 223 aa12.98□□□□□ -0.33
NPIPB4-221ENST00000545367 UTRNP46939 3433 aa12.98□□□□□ -0.33
NPIPB4-221ENST00000545367 SPATA31E1Q6ZUB1 1445 aa12.97□□□□□ -0.33
NPIPB4-221ENST00000545367 PSME1Q06323 249 aa12.97□□□□□ -0.33
NPIPB4-221ENST00000545367 TMEM132EQ6IEE7 984 aa12.97□□□□□ -0.33
NPIPB4-221ENST00000545367 ANKARQ7Z5J8 1434 aa12.96□□□□□ -0.33
NPIPB4-221ENST00000545367 PARD3Q8TEW0 1356 aa12.96□□□□□ -0.33
NPIPB4-221ENST00000545367 SPATA31A5Q5VU36 1347 aa12.96□□□□□ -0.33
NPIPB4-221ENST00000545367 SPATA31A7Q8IWB4 1347 aa12.96□□□□□ -0.33
NPIPB4-221ENST00000545367 REM2Q8IYK8 340 aaPredicted RBP12.96□□□□□ -0.33
NPIPB4-221ENST00000545367 WNK3Q9BYP7 1800 aa12.96□□□□□ -0.33
NPIPB4-221ENST00000545367 TRIM37O94972 964 aa12.95□□□□□ -0.34
NPIPB4-221ENST00000545367 PARP4Q9UKK3 1724 aaKnown RBP12.95□□□□□ -0.34
NPIPB4-221ENST00000545367 CHD4Q14839 1912 aa12.95□□□□□ -0.34
NPIPB4-221ENST00000545367 SBF2Q86WG5 1849 aa12.95□□□□□ -0.34
NPIPB4-221ENST00000545367 ANKRD30BQ9BXX2 1392 aa12.94□□□□□ -0.34
NPIPB4-221ENST00000545367 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
NPIPB4-221ENST00000545367 TULP4Q9NRJ4 1543 aa12.94□□□□□ -0.34
NPIPB4-221ENST00000545367 DLC1Q96QB1 1528 aa12.93□□□□□ -0.34
NPIPB4-221ENST00000545367 LRRC37A3O60309 1634 aa12.93□□□□□ -0.34
NPIPB4-221ENST00000545367 SAFB2Q14151 953 aaKnown RBP eCLIP12.93□□□□□ -0.34
NPIPB4-221ENST00000545367 PROM2Q8N271 834 aa12.93□□□□□ -0.34
NPIPB4-221ENST00000545367 CAMKK2Q96RR4 588 aa12.93□□□□□ -0.34
NPIPB4-221ENST00000545367 PPP1R1BQ9UD71 204 aaPredicted RBP12.93□□□□□ -0.34
NPIPB4-221ENST00000545367 PPARGC1BQ86YN6 1023 aaKnown RBP12.92□□□□□ -0.34
NPIPB4-221ENST00000545367 PMFBP1Q8TBY8 1022 aa12.92□□□□□ -0.34
NPIPB4-221ENST00000545367 TOPAZ1Q8N9V7 1692 aa12.92□□□□□ -0.34
NPIPB4-221ENST00000545367 LMO7Q8WWI1 1683 aa12.92□□□□□ -0.34
NPIPB4-221ENST00000545367 AKAP12Q02952 1782 aa12.92□□□□□ -0.34
NPIPB4-221ENST00000545367 PEAK1Q9H792 1746 aa12.91□□□□□ -0.34
NPIPB4-221ENST00000545367 RGL3Q3MIN7 710 aa12.91□□□□□ -0.34
NPIPB4-221ENST00000545367 ARHGEF28Q8N1W1 1705 aaKnown RBP12.91□□□□□ -0.34
NPIPB4-221ENST00000545367 APBA3O96018 575 aa12.9□□□□□ -0.34
NPIPB4-221ENST00000545367 PRDM11Q9NQV5 511 aa12.9□□□□□ -0.34
NPIPB4-221ENST00000545367 SPATA31A1Q5TZJ5 1347 aa12.89□□□□□ -0.35
NPIPB4-221ENST00000545367 PRAM1Q96QH2 718 aa12.89□□□□□ -0.35
NPIPB4-221ENST00000545367 GPRASP1Q5JY77 1395 aa12.89□□□□□ -0.35
NPIPB4-221ENST00000545367 KIAA0232Q92628 1395 aa12.89□□□□□ -0.35
NPIPB4-221ENST00000545367 ADGRB1O14514 1584 aa12.89□□□□□ -0.35
NPIPB4-221ENST00000545367 FAM196AQ6ZSG2 479 aa12.88□□□□□ -0.35
NPIPB4-221ENST00000545367 ATP7BP35670 1465 aa12.88□□□□□ -0.35
NPIPB4-221ENST00000545367 SSH2Q76I76 1423 aa12.88□□□□□ -0.35
NPIPB4-221ENST00000545367 ACIN1Q9UKV3 1341 aaKnown RBP12.88□□□□□ -0.35
NPIPB4-221ENST00000545367 EIF3AQ14152 1382 aaKnown RBP12.87□□□□□ -0.35
NPIPB4-221ENST00000545367 SPON1Q9HCB6 807 aa12.87□□□□□ -0.35
NPIPB4-221ENST00000545367 STRN4Q9NRL3 753 aa12.87□□□□□ -0.35
NPIPB4-221ENST00000545367 CHRNA2Q15822 529 aa12.86□□□□□ -0.35
NPIPB4-221ENST00000545367 SPDYE1Q8NFV5 336 aaPredicted RBP12.86□□□□□ -0.35
NPIPB4-221ENST00000545367 USP35Q9P2H5 1018 aa12.86□□□□□ -0.35
NPIPB4-221ENST00000545367 PRR36Q9H6K5 1346 aa12.86□□□□□ -0.35
NPIPB4-221ENST00000545367 DHX57Q6P158 1386 aaKnown RBP12.85□□□□□ -0.35
NPIPB4-221ENST00000545367 NBPF8Q3BBV2 869 aa12.85□□□□□ -0.35
NPIPB4-221ENST00000545367 NBPF14Q5TI25 921 aa12.85□□□□□ -0.35
NPIPB4-221ENST00000545367 CEP350Q5VT06 3117 aa12.84□□□□□ -0.35
NPIPB4-221ENST00000545367 SENP3-EIF4A1A0A087X0R7 540 aa12.84□□□□□ -0.35
NPIPB4-221ENST00000545367 KCNQ2O43526 872 aa12.84□□□□□ -0.35
NPIPB4-221ENST00000545367 PAK3O75914 559 aaPredicted RBP12.84□□□□□ -0.35
NPIPB4-221ENST00000545367 HIRIP3Q9BW71 556 aaPredicted RBP12.84□□□□□ -0.35
NPIPB4-221ENST00000545367 SIRT1Q96EB6 747 aa12.83□□□□□ -0.36
NPIPB4-221ENST00000545367 POGKQ9P215 609 aa12.83□□□□□ -0.36
NPIPB4-221ENST00000545367 GOLGB1Q14789 3259 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms