RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 K7ELQ4 463 aaPredicted RBP10.22□□□□□ -0.77
ATXN3-216ENST00000545170 CEP164Q9UPV0 1460 aa10.22□□□□□ -0.77
ATXN3-216ENST00000545170 IVLP07476 585 aa10.22□□□□□ -0.77
ATXN3-216ENST00000545170 LUZP1Q86V48 1076 aa10.22□□□□□ -0.77
ATXN3-216ENST00000545170 RSPH14Q9UHP6 348 aa10.22□□□□□ -0.77
ATXN3-216ENST00000545170 RB1CC1Q8TDY2 1594 aa10.21□□□□□ -0.77
ATXN3-216ENST00000545170 ELL2O00472 640 aaPredicted RBP10.21□□□□□ -0.77
ATXN3-216ENST00000545170 SMARCC1Q92922 1105 aaPredicted RBP10.21□□□□□ -0.77
ATXN3-216ENST00000545170 URI1O94763 535 aaPredicted RBP10.21□□□□□ -0.77
ATXN3-216ENST00000545170 KDM4AO75164 1064 aa10.21□□□□□ -0.78
ATXN3-216ENST00000545170 CCDC113Q9H0I3 377 aa10.21□□□□□ -0.78
ATXN3-216ENST00000545170 MCM3P25205 808 aa10.21□□□□□ -0.78
ATXN3-216ENST00000545170 C10orf67Q8IYJ2 551 aa10.21□□□□□ -0.78
ATXN3-216ENST00000545170 C16orf45Q96MC5 204 aaPredicted RBP10.21□□□□□ -0.78
ATXN3-216ENST00000545170 IFIT2P09913 472 aaKnown RBP10.2□□□□□ -0.78
ATXN3-216ENST00000545170 ARID4AP29374 1257 aaPredicted RBP10.2□□□□□ -0.78
ATXN3-216ENST00000545170 NEK4P51957 841 aa10.2□□□□□ -0.78
ATXN3-216ENST00000545170 TCEAL9Q9UHQ7 104 aa10.2□□□□□ -0.78
ATXN3-216ENST00000545170 ZNF396Q96N95 335 aaPredicted RBP10.2□□□□□ -0.78
ATXN3-216ENST00000545170 CLCN1P35523 988 aa10.2□□□□□ -0.78
ATXN3-216ENST00000545170 RASSF4Q9H2L5 321 aa10.2□□□□□ -0.78
ATXN3-216ENST00000545170 DAAM2Q86T65 1068 aa10.2□□□□□ -0.78
ATXN3-216ENST00000545170 PANK1Q8TE04 598 aa10.2□□□□□ -0.78
ATXN3-216ENST00000545170 PRIMPOLQ96LW4 560 aa10.2□□□□□ -0.78
ATXN3-216ENST00000545170 MCM2P49736 904 aa10.19□□□□□ -0.78
ATXN3-216ENST00000545170 SEPT6Q14141 434 aa10.19□□□□□ -0.78
ATXN3-216ENST00000545170 TRDNQ13061 729 aa10.19□□□□□ -0.78
ATXN3-216ENST00000545170 TMX1Q9H3N1 280 aa10.19□□□□□ -0.78
ATXN3-216ENST00000545170 MPHOSPH10O00566 681 aaKnown RBP10.19□□□□□ -0.78
ATXN3-216ENST00000545170 SETSIPP0DME0 302 aa10.19□□□□□ -0.78
ATXN3-216ENST00000545170 GBP6Q6ZN66 633 aa10.19□□□□□ -0.78
ATXN3-216ENST00000545170 RBM28Q9NW13 759 aaKnown RBP10.19□□□□□ -0.78
ATXN3-216ENST00000545170 PLEKHD1A6NEE1 506 aa10.18□□□□□ -0.78
ATXN3-216ENST00000545170 IGSF3O75054 1194 aa10.18□□□□□ -0.78
ATXN3-216ENST00000545170 CEP57Q86XR8 500 aa10.18□□□□□ -0.78
ATXN3-216ENST00000545170 DACH1Q9UI36 760 aa10.18□□□□□ -0.78
ATXN3-216ENST00000545170 ATP2C2O75185 946 aa10.18□□□□□ -0.78
ATXN3-216ENST00000545170 PSMA5P28066 241 aa10.18□□□□□ -0.78
ATXN3-216ENST00000545170 LRRFIP1Q32MZ4 808 aaKnown RBP10.18□□□□□ -0.78
ATXN3-216ENST00000545170 NUP62CLQ9H1M0 184 aa10.18□□□□□ -0.78
ATXN3-216ENST00000545170 WDR33Q9C0J8 1336 aaKnown RBP10.18□□□□□ -0.78
ATXN3-216ENST00000545170 CCDC175P0C221 793 aa10.18□□□□□ -0.78
ATXN3-216ENST00000545170 HSPA4P34932 840 aa10.18□□□□□ -0.78
ATXN3-216ENST00000545170 LUC7LQ9NQ29 371 aaKnown RBP10.18□□□□□ -0.78
ATXN3-216ENST00000545170 ERICH2A1L162 156 aa10.18□□□□□ -0.78
ATXN3-216ENST00000545170 CCDC160A6NGH7 325 aa10.18□□□□□ -0.78
ATXN3-216ENST00000545170 EPB41L2O43491 1005 aaKnown RBP10.18□□□□□ -0.78
ATXN3-216ENST00000545170 PIP4K2AP48426 406 aaPredicted RBP10.18□□□□□ -0.78
ATXN3-216ENST00000545170 GIGYF2Q6Y7W6 1299 aaKnown RBP10.18□□□□□ -0.78
ATXN3-216ENST00000545170 DRC1Q96MC2 740 aa10.18□□□□□ -0.78
ATXN3-216ENST00000545170 ROCK1Q13464 1354 aa10.18□□□□□ -0.78
ATXN3-216ENST00000545170 ARHGAP29Q52LW3 1261 aa10.17□□□□□ -0.78
ATXN3-216ENST00000545170 TRMT1Q9NXH9 659 aaKnown RBP10.17□□□□□ -0.78
ATXN3-216ENST00000545170 MCM5P33992 734 aa10.17□□□□□ -0.78
ATXN3-216ENST00000545170 SUDS3Q9H7L9 328 aaPredicted RBP10.17□□□□□ -0.78
ATXN3-216ENST00000545170 PDZRN3Q9UPQ7 1066 aa10.17□□□□□ -0.78
ATXN3-216ENST00000545170 ZSCAN12O43309 604 aa10.17□□□□□ -0.78
ATXN3-216ENST00000545170 NAA25Q14CX7 972 aa10.17□□□□□ -0.78
ATXN3-216ENST00000545170 A0A1B0GUL7 405 aa10.17□□□□□ -0.78
ATXN3-216ENST00000545170 TXLNAP40222 546 aa10.17□□□□□ -0.78
ATXN3-216ENST00000545170 PKD2Q13563 968 aa10.17□□□□□ -0.78
ATXN3-216ENST00000545170 NINLQ9Y2I6 1382 aa10.17□□□□□ -0.78
ATXN3-216ENST00000545170 STK38Q15208 465 aa10.17□□□□□ -0.78
ATXN3-216ENST00000545170 SYCP1Q15431 976 aa10.17□□□□□ -0.78
ATXN3-216ENST00000545170 STK26Q9P289 416 aa10.17□□□□□ -0.78
ATXN3-216ENST00000545170 UPF3BQ9BZI7 483 aaKnown RBP10.16□□□□□ -0.78
ATXN3-216ENST00000545170 RAI14Q9P0K7 980 aa10.16□□□□□ -0.78
ATXN3-216ENST00000545170 POTEB2H3BUK9 544 aa10.16□□□□□ -0.78
ATXN3-216ENST00000545170 MSL1Q68DK7 614 aa10.16□□□□□ -0.78
ATXN3-216ENST00000545170 BRMS1Q9HCU9 246 aa10.16□□□□□ -0.78
ATXN3-216ENST00000545170 CIZ1Q9ULV3 898 aaPredicted RBP10.16□□□□□ -0.78
ATXN3-216ENST00000545170 ARHGAP35Q9NRY4 1499 aa10.16□□□□□ -0.78
ATXN3-216ENST00000545170 PDCP20941 246 aa10.16□□□□□ -0.78
ATXN3-216ENST00000545170 SMC1AQ14683 1233 aaKnown RBP10.16□□□□□ -0.78
ATXN3-216ENST00000545170 CEP135Q66GS9 1140 aa10.16□□□□□ -0.78
ATXN3-216ENST00000545170 IFFO1Q0D2I5 559 aa10.16□□□□□ -0.78
ATXN3-216ENST00000545170 SCLT1Q96NL6 688 aa10.16□□□□□ -0.78
ATXN3-216ENST00000545170 APAF1O14727 1248 aa10.16□□□□□ -0.78
ATXN3-216ENST00000545170 KIF5CO60282 957 aa10.16□□□□□ -0.78
ATXN3-216ENST00000545170 CFAP57Q96MR6 1250 aa10.16□□□□□ -0.78
ATXN3-216ENST00000545170 MPHOSPH9Q99550 1183 aa10.16□□□□□ -0.78
ATXN3-216ENST00000545170 UBE4AQ14139 1066 aa10.15□□□□□ -0.78
ATXN3-216ENST00000545170 BANK1Q8NDB2 785 aa10.15□□□□□ -0.78
ATXN3-216ENST00000545170 NUP133Q8WUM0 1156 aa10.15□□□□□ -0.78
ATXN3-216ENST00000545170 CLIP2Q9UDT6 1046 aa10.15□□□□□ -0.78
ATXN3-216ENST00000545170 SCRIBQ14160 1630 aa10.15□□□□□ -0.78
ATXN3-216ENST00000545170 CAMK4Q16566 473 aa10.15□□□□□ -0.78
ATXN3-216ENST00000545170 PANK3Q9H999 370 aa10.15□□□□□ -0.78
ATXN3-216ENST00000545170 GOPCQ9HD26 462 aa10.15□□□□□ -0.78
ATXN3-216ENST00000545170 SMTNL1A8MU46 457 aa10.15□□□□□ -0.79
ATXN3-216ENST00000545170 KRT85P78386 507 aa10.15□□□□□ -0.79
ATXN3-216ENST00000545170 CEP57L1Q8IYX8 460 aa10.15□□□□□ -0.79
ATXN3-216ENST00000545170 RAD21O60216 631 aa10.15□□□□□ -0.79
ATXN3-216ENST00000545170 DHX16O60231 1041 aaKnown RBP10.15□□□□□ -0.79
ATXN3-216ENST00000545170 AAMPQ13685 434 aa10.15□□□□□ -0.79
ATXN3-216ENST00000545170 KIF4BQ2VIQ3 1234 aa10.15□□□□□ -0.79
ATXN3-216ENST00000545170 RSRC1Q96IZ7 334 aaKnown RBP10.15□□□□□ -0.79
ATXN3-216ENST00000545170 PAXBP1Q9Y5B6 917 aa10.15□□□□□ -0.79
ATXN3-216ENST00000545170 ME1P48163 572 aa10.14□□□□□ -0.79
ATXN3-216ENST00000545170 MAP3K11Q16584 847 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms