RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 ACEP12821 1306 aa24.15■■□□□ 1.46
HOXD8-204ENST00000544999 RALGAPBQ86X10 1494 aa24.15■■□□□ 1.46
HOXD8-204ENST00000544999 RGS12O14924 1447 aa24.14■■□□□ 1.45
HOXD8-204ENST00000544999 PAK3O75914 559 aaPredicted RBP24.14■■□□□ 1.45
HOXD8-204ENST00000544999 CABP2Q9NPB3 220 aa24.14■■□□□ 1.45
HOXD8-204ENST00000544999 EVC2Q86UK5 1308 aa24.13■■□□□ 1.45
HOXD8-204ENST00000544999 PPIP5K1Q6PFW1 1433 aa24.13■■□□□ 1.45
HOXD8-204ENST00000544999 PLEKHG5O94827 1062 aa24.13■■□□□ 1.45
HOXD8-204ENST00000544999 CRYBG1Q9Y4K1 1723 aa24.11■■□□□ 1.45
HOXD8-204ENST00000544999 UNC5CLQ8IV45 518 aa24.11■■□□□ 1.45
HOXD8-204ENST00000544999 CARD11Q9BXL7 1154 aa24.11■■□□□ 1.45
HOXD8-204ENST00000544999 NWD2Q9ULI1 1742 aa24.1■■□□□ 1.45
HOXD8-204ENST00000544999 PLCH1Q4KWH8 1693 aa24.09■■□□□ 1.45
HOXD8-204ENST00000544999 SBNO2Q9Y2G9 1366 aa24.07■■□□□ 1.44
HOXD8-204ENST00000544999 GJD4Q96KN9 370 aaPredicted RBP24.06■■□□□ 1.44
HOXD8-204ENST00000544999 BRD4O60885 1362 aaPredicted RBP24.05■■□□□ 1.44
HOXD8-204ENST00000544999 FAM83GA6ND36 823 aa24.05■■□□□ 1.44
HOXD8-204ENST00000544999 CABP1Q9NZU7 370 aa24.05■■□□□ 1.44
HOXD8-204ENST00000544999 COL14A1Q05707 1796 aaKnown RBP24.04■■□□□ 1.44
HOXD8-204ENST00000544999 PHRF1Q9P1Y6 1649 aaKnown RBP24.04■■□□□ 1.44
HOXD8-204ENST00000544999 UPF1Q92900 1129 aaKnown RBP eCLIP24.02■■□□□ 1.44
HOXD8-204ENST00000544999 PCGF6Q9BYE7 350 aa24.02■■□□□ 1.44
HOXD8-204ENST00000544999 GLI3P10071 1580 aa24.02■■□□□ 1.44
HOXD8-204ENST00000544999 CLSPNQ9HAW4 1339 aa24.02■■□□□ 1.44
HOXD8-204ENST00000544999 ATAD2Q6PL18 1390 aa24.02■■□□□ 1.44
HOXD8-204ENST00000544999 VPS72Q15906 364 aa24.01■■□□□ 1.43
HOXD8-204ENST00000544999 NRAPQ86VF7 1730 aa24.01■■□□□ 1.43
HOXD8-204ENST00000544999 USP6P35125 1406 aa24.01■■□□□ 1.43
HOXD8-204ENST00000544999 NUTM2GQ5VZR2 741 aa24■■□□□ 1.43
HOXD8-204ENST00000544999 ABTB2Q8N961 1025 aa24■■□□□ 1.43
HOXD8-204ENST00000544999 USP19O94966 1318 aa23.97■■□□□ 1.43
HOXD8-204ENST00000544999 PRDM11Q9NQV5 511 aa23.97■■□□□ 1.43
HOXD8-204ENST00000544999 BTG4Q9NY30 223 aa23.97■■□□□ 1.43
HOXD8-204ENST00000544999 AKAP12Q02952 1782 aa23.96■■□□□ 1.43
HOXD8-204ENST00000544999 NRKQ7Z2Y5 1582 aa23.96■■□□□ 1.43
HOXD8-204ENST00000544999 SSH2Q76I76 1423 aa23.96■■□□□ 1.43
HOXD8-204ENST00000544999 KIAA0232Q92628 1395 aa23.96■■□□□ 1.43
HOXD8-204ENST00000544999 NLRP13Q86W25 1043 aa23.96■■□□□ 1.43
HOXD8-204ENST00000544999 ZNF692Q9BU19 519 aaPredicted RBP23.96■■□□□ 1.43
HOXD8-204ENST00000544999 TIMELESSQ9UNS1 1208 aa23.95■■□□□ 1.42
HOXD8-204ENST00000544999 CCDC9Q9Y3X0 531 aaKnown RBP23.94■■□□□ 1.42
HOXD8-204ENST00000544999 CPSF1Q10570 1443 aaKnown RBP23.93■■□□□ 1.42
HOXD8-204ENST00000544999 ZC3H6P61129 1189 aaKnown RBP23.92■■□□□ 1.42
HOXD8-204ENST00000544999 PUS7Q96PZ0 661 aaKnown RBP23.91■■□□□ 1.42
HOXD8-204ENST00000544999 CPDO75976 1380 aa23.91■■□□□ 1.42
HOXD8-204ENST00000544999 PIK3C2AO00443 1686 aa23.9■■□□□ 1.42
HOXD8-204ENST00000544999 ONECUT3O60422 494 aaPredicted RBP23.9■■□□□ 1.42
HOXD8-204ENST00000544999 CHRNA2Q15822 529 aa23.9■■□□□ 1.42
HOXD8-204ENST00000544999 TTC21BQ7Z4L5 1316 aa23.89■■□□□ 1.42
HOXD8-204ENST00000544999 ST20-MTHFSA0A0A6YYL1 179 aa23.89■■□□□ 1.41
HOXD8-204ENST00000544999 SLC24A1O60721 1099 aa23.89■■□□□ 1.41
HOXD8-204ENST00000544999 GCP02774 474 aa23.89■■□□□ 1.41
HOXD8-204ENST00000544999 NLRP6P59044 892 aa23.89■■□□□ 1.41
HOXD8-204ENST00000544999 SLIT3O75094 1523 aa23.89■■□□□ 1.41
HOXD8-204ENST00000544999 TTC21AQ8NDW8 1320 aa23.88■■□□□ 1.41
HOXD8-204ENST00000544999 MON2Q7Z3U7 1717 aa23.88■■□□□ 1.41
HOXD8-204ENST00000544999 SEPT12Q8IYM1 358 aa23.88■■□□□ 1.41
HOXD8-204ENST00000544999 TESK2Q96S53 571 aa23.88■■□□□ 1.41
HOXD8-204ENST00000544999 KTN1Q86UP2 1357 aaKnown RBP23.88■■□□□ 1.41
HOXD8-204ENST00000544999 BRWD3Q6RI45 1802 aa23.87■■□□□ 1.41
HOXD8-204ENST00000544999 SPATA31A5Q5VU36 1347 aa23.86■■□□□ 1.41
HOXD8-204ENST00000544999 SPATA31A7Q8IWB4 1347 aa23.86■■□□□ 1.41
HOXD8-204ENST00000544999 LMO7Q8WWI1 1683 aa23.86■■□□□ 1.41
HOXD8-204ENST00000544999 USP47Q96K76 1375 aa23.85■■□□□ 1.41
HOXD8-204ENST00000544999 CD163L1Q9NR16 1453 aa23.85■■□□□ 1.41
HOXD8-204ENST00000544999 TMC1Q8TDI8 760 aa23.84■■□□□ 1.41
HOXD8-204ENST00000544999 CAMTA1Q9Y6Y1 1673 aa23.83■■□□□ 1.4
HOXD8-204ENST00000544999 FAM98CQ17RN3 349 aaKnown RBP23.82■■□□□ 1.4
HOXD8-204ENST00000544999 HDGFL2Q7Z4V5 671 aaPredicted RBP23.82■■□□□ 1.4
HOXD8-204ENST00000544999 SLC12A5Q9H2X9 1139 aa23.82■■□□□ 1.4
HOXD8-204ENST00000544999 STRN4Q9NRL3 753 aa23.82■■□□□ 1.4
HOXD8-204ENST00000544999 SPATA31A1Q5TZJ5 1347 aa23.81■■□□□ 1.4
HOXD8-204ENST00000544999 NINLQ9Y2I6 1382 aa23.8■■□□□ 1.4
HOXD8-204ENST00000544999 EVA1CP58658 441 aa23.8■■□□□ 1.4
HOXD8-204ENST00000544999 CCER1Q8TC90 406 aaPredicted RBP23.8■■□□□ 1.4
HOXD8-204ENST00000544999 A0A0G2JS52 829 aa23.79■■□□□ 1.4
HOXD8-204ENST00000544999 MYT1Q01538 1121 aa23.79■■□□□ 1.4
HOXD8-204ENST00000544999 KRT27Q7Z3Y8 459 aa23.79■■□□□ 1.4
HOXD8-204ENST00000544999 KCNH5Q8NCM2 988 aa23.79■■□□□ 1.4
HOXD8-204ENST00000544999 TERF2IPQ9NYB0 399 aa23.79■■□□□ 1.4
HOXD8-204ENST00000544999 THSD7AQ9UPZ6 1657 aa23.79■■□□□ 1.4
HOXD8-204ENST00000544999 CCDC125Q86Z20 511 aa23.78■■□□□ 1.4
HOXD8-204ENST00000544999 USP54Q70EL1 1684 aa23.78■■□□□ 1.4
HOXD8-204ENST00000544999 AATKQ6ZMQ8 1374 aa23.78■■□□□ 1.4
HOXD8-204ENST00000544999 EDC4Q6P2E9 1401 aaKnown RBP23.77■■□□□ 1.4
HOXD8-204ENST00000544999 TMF1P82094 1093 aa23.77■■□□□ 1.4
HOXD8-204ENST00000544999 A0A1W2PP64 1363 aa23.77■■□□□ 1.4
HOXD8-204ENST00000544999 USP31Q70CQ4 1352 aa23.77■■□□□ 1.4
HOXD8-204ENST00000544999 COL5A2P05997 1499 aaPredicted RBP23.76■■□□□ 1.39
HOXD8-204ENST00000544999 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.76■■□□□ 1.39
HOXD8-204ENST00000544999 ZBTB7CA1YPR0 619 aa23.75■■□□□ 1.39
HOXD8-204ENST00000544999 LARP1Q6PKG0 1096 aaKnown RBP23.75■■□□□ 1.39
HOXD8-204ENST00000544999 COL18A1P39060 1754 aa23.75■■□□□ 1.39
HOXD8-204ENST00000544999 NFAT5O94916 1531 aa23.74■■□□□ 1.39
HOXD8-204ENST00000544999 ARHGEF25Q86VW2 580 aa23.73■■□□□ 1.39
HOXD8-204ENST00000544999 BLMP54132 1417 aaPredicted RBP23.73■■□□□ 1.39
HOXD8-204ENST00000544999 BARGINQ6ZT62 677 aa23.72■■□□□ 1.39
HOXD8-204ENST00000544999 NME9Q86XW9 330 aa23.72■■□□□ 1.39
HOXD8-204ENST00000544999 POTEDQ86YR6 584 aa23.71■■□□□ 1.39
HOXD8-204ENST00000544999 USP35Q9P2H5 1018 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms