RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 ZRANB1Q9UGI0 708 aa15.22■□□□□ 0.03
TNC-213ENST00000544972 WDR43Q15061 677 aaKnown RBP eCLIP15.2■□□□□ 0.02
TNC-213ENST00000544972 SCAF1Q9H7N4 1312 aaKnown RBP15.2■□□□□ 0.02
TNC-213ENST00000544972 SENP3-EIF4A1A0A087X0R7 540 aa15.2■□□□□ 0.02
TNC-213ENST00000544972 C14orf37Q86TY3 774 aa15.2■□□□□ 0.02
TNC-213ENST00000544972 NGDNQ8NEJ9 315 aaKnown RBP15.2■□□□□ 0.02
TNC-213ENST00000544972 TMEM94Q12767 1356 aa15.18■□□□□ 0.02
TNC-213ENST00000544972 FBLN1P23142 703 aa15.18■□□□□ 0.02
TNC-213ENST00000544972 C19orf44Q9H6X5 657 aa15.18■□□□□ 0.02
TNC-213ENST00000544972 MAP2P11137 1827 aaKnown RBP15.18■□□□□ 0.02
TNC-213ENST00000544972 OVOS2A0A0J9YW53 1432 aa15.18■□□□□ 0.02
TNC-213ENST00000544972 OVOS2Q6IE36 1432 aa15.18■□□□□ 0.02
TNC-213ENST00000544972 NCOA3Q9Y6Q9 1424 aa15.18■□□□□ 0.02
TNC-213ENST00000544972 COL3A1P02461 1466 aaPredicted RBP15.18■□□□□ 0.02
TNC-213ENST00000544972 COG3Q96JB2 828 aa15.17■□□□□ 0.02
TNC-213ENST00000544972 PHF8Q9UPP1 1060 aa15.17■□□□□ 0.02
TNC-213ENST00000544972 CFAP53Q96M91 514 aa15.17■□□□□ 0.02
TNC-213ENST00000544972 POLKQ9UBT6 870 aa15.17■□□□□ 0.02
TNC-213ENST00000544972 TTC21AQ8NDW8 1320 aa15.17■□□□□ 0.02
TNC-213ENST00000544972 AATKQ6ZMQ8 1374 aa15.17■□□□□ 0.02
TNC-213ENST00000544972 PNPLA6Q8IY17 1366 aa15.17■□□□□ 0.02
TNC-213ENST00000544972 XIRP1Q702N8 1843 aaKnown RBP15.16■□□□□ 0.02
TNC-213ENST00000544972 PIK3C2AO00443 1686 aa15.15■□□□□ 0.02
TNC-213ENST00000544972 ESCO1Q5FWF5 840 aa15.15■□□□□ 0.02
TNC-213ENST00000544972 SMG6Q86US8 1419 aaKnown RBP15.14■□□□□ 0.01
TNC-213ENST00000544972 DCCP43146 1447 aa15.13■□□□□ 0.01
TNC-213ENST00000544972 USP31Q70CQ4 1352 aa15.13■□□□□ 0.01
TNC-213ENST00000544972 ZNF335Q9H4Z2 1342 aaPredicted RBP15.13■□□□□ 0.01
TNC-213ENST00000544972 ORAI2Q96SN7 254 aa15.13■□□□□ 0.01
TNC-213ENST00000544972 GTF3C3Q9Y5Q9 886 aa15.13■□□□□ 0.01
TNC-213ENST00000544972 C1orf167Q5SNV9 1468 aa15.13■□□□□ 0.01
TNC-213ENST00000544972 EMILIN1Q9Y6C2 1016 aa15.13■□□□□ 0.01
TNC-213ENST00000544972 MST1RQ04912 1400 aa15.12■□□□□ 0.01
TNC-213ENST00000544972 MARF1Q9Y4F3 1742 aaKnown RBP15.12■□□□□ 0.01
TNC-213ENST00000544972 CCDC146Q8IYE0 955 aa15.12■□□□□ 0.01
TNC-213ENST00000544972 LRRC7Q96NW7 1537 aa15.12■□□□□ 0.01
TNC-213ENST00000544972 USP54Q70EL1 1684 aa15.11■□□□□ 0.01
TNC-213ENST00000544972 SALL2Q9Y467 1007 aaPredicted RBP15.11■□□□□ 0.01
TNC-213ENST00000544972 RRS1Q15050 365 aaKnown RBP15.1■□□□□ 0.01
TNC-213ENST00000544972 CDK12Q9NYV4 1490 aaPredicted RBP15.1■□□□□ 0.01
TNC-213ENST00000544972 ATF3P18847 181 aa15.1■□□□□ 0.01
TNC-213ENST00000544972 PPM1GO15355 546 aaPredicted RBP15.09■□□□□ 0.01
TNC-213ENST00000544972 KIF1AQ12756 1690 aa15.09■□□□□ 0.01
TNC-213ENST00000544972 APAF1O14727 1248 aa15.08■□□□□ 0.01
TNC-213ENST00000544972 FOXO3O43524 673 aa15.08■□□□□ 0.01
TNC-213ENST00000544972 DIAPH1O60610 1272 aaKnown RBP15.08■□□□□ 0.01
TNC-213ENST00000544972 U2AF1L5P0DN76 240 aaPredicted RBP15.08■□□□□ 0
TNC-213ENST00000544972 U2AF1Q01081 240 aaKnown RBP eCLIP15.08■□□□□ 0
TNC-213ENST00000544972 PSME1Q06323 249 aa15.08■□□□□ 0
TNC-213ENST00000544972 CADPS2Q86UW7 1296 aa15.08■□□□□ 0
TNC-213ENST00000544972 MSH6P52701 1360 aa15.07■□□□□ 0
TNC-213ENST00000544972 NLRP6P59044 892 aa15.07■□□□□ 0
TNC-213ENST00000544972 ABTB2Q8N961 1025 aa15.07■□□□□ 0
TNC-213ENST00000544972 NUDCQ9Y266 331 aa15.07■□□□□ 0
TNC-213ENST00000544972 DMRT2Q9Y5R5 561 aa15.07■□□□□ 0
TNC-213ENST00000544972 PEAK1Q9H792 1746 aa15.07■□□□□ 0
TNC-213ENST00000544972 ZNF521Q96K83 1311 aa15.07■□□□□ 0
TNC-213ENST00000544972 TRPM3Q9HCF6 1732 aaPredicted RBP15.06■□□□□ 0
TNC-213ENST00000544972 PAK3O75914 559 aaPredicted RBP15.06■□□□□ 0
TNC-213ENST00000544972 RUNDC1Q96C34 613 aa15.06■□□□□ 0
TNC-213ENST00000544972 IQSEC2Q5JU85 1478 aa15.06■□□□□ 0
TNC-213ENST00000544972 U2SURPO15042 1029 aaKnown RBP15.06■□□□□ 0
TNC-213ENST00000544972 PDE3BQ13370 1112 aa15.06■□□□□ 0
TNC-213ENST00000544972 NUTM2GQ5VZR2 741 aa15.06■□□□□ 0
TNC-213ENST00000544972 IL13P35225 146 aa15.05■□□□□ -0
TNC-213ENST00000544972 XPCQ01831 940 aaPredicted RBP15.04■□□□□ -0
TNC-213ENST00000544972 CDCA7LQ96GN5 454 aa15.04■□□□□ -0
TNC-213ENST00000544972 PLEKHF1Q96S99 279 aa15.04■□□□□ -0
TNC-213ENST00000544972 SOX12O15370 315 aa15.03■□□□□ -0
TNC-213ENST00000544972 MAP3K19Q56UN5 1328 aa15.03■□□□□ -0
TNC-213ENST00000544972 TCP11L2Q8N4U5 519 aa15.03■□□□□ -0
TNC-213ENST00000544972 KRT28Q7Z3Y7 464 aa15.02■□□□□ -0
TNC-213ENST00000544972 NGEFQ8N5V2 710 aa15.02■□□□□ -0
TNC-213ENST00000544972 HSP90AB2PQ58FF8 381 aa15.01□□□□□ -0.01
TNC-213ENST00000544972 SUPT16HQ9Y5B9 1047 aaKnown RBP15.01□□□□□ -0.01
TNC-213ENST00000544972 SBNO1A3KN83 1393 aa15□□□□□ -0.01
TNC-213ENST00000544972 NFAT5O94916 1531 aa15□□□□□ -0.01
TNC-213ENST00000544972 FCHSD2O94868 740 aa15□□□□□ -0.01
TNC-213ENST00000544972 EIF4A2Q14240 407 aaKnown RBP15□□□□□ -0.01
TNC-213ENST00000544972 PHF23Q9BUL5 403 aaPredicted RBP15□□□□□ -0.01
TNC-213ENST00000544972 RSPH6AQ9H0K4 717 aa15□□□□□ -0.01
TNC-213ENST00000544972 ALS2Q96Q42 1657 aa15□□□□□ -0.01
TNC-213ENST00000544972 DDX17Q92841 729 aaKnown RBP14.99□□□□□ -0.01
TNC-213ENST00000544972 FLT4P35916 1363 aa14.99□□□□□ -0.01
TNC-213ENST00000544972 NCBP3Q53F19 620 aaKnown RBP14.99□□□□□ -0.01
TNC-213ENST00000544972 RRP7AQ9Y3A4 280 aaKnown RBP14.99□□□□□ -0.01
TNC-213ENST00000544972 RGPD1P0DJD0 1748 aa14.98□□□□□ -0.01
TNC-213ENST00000544972 GOLGA2Q08379 1002 aa14.98□□□□□ -0.01
TNC-213ENST00000544972 BRINP3Q76B58 766 aa14.98□□□□□ -0.01
TNC-213ENST00000544972 WWC1Q8IX03 1113 aa14.98□□□□□ -0.01
TNC-213ENST00000544972 KIF24Q5T7B8 1368 aa14.98□□□□□ -0.01
TNC-213ENST00000544972 SLIT3O75094 1523 aa14.98□□□□□ -0.01
TNC-213ENST00000544972 LTN1O94822 1766 aa14.97□□□□□ -0.01
TNC-213ENST00000544972 HMOX1P09601 288 aa14.97□□□□□ -0.01
TNC-213ENST00000544972 NEUROD2Q15784 382 aa14.97□□□□□ -0.01
TNC-213ENST00000544972 SLAIN2Q9P270 581 aa14.97□□□□□ -0.01
TNC-213ENST00000544972 NPHP3Q7Z494 1330 aa14.97□□□□□ -0.01
TNC-213ENST00000544972 PXDNQ92626 1479 aa14.97□□□□□ -0.01
TNC-213ENST00000544972 USP19O94966 1318 aa14.96□□□□□ -0.01
TNC-213ENST00000544972 PRKAR2BP31323 418 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms