RNA–Protein interactions for RNA: ENST00000544882.1

SCNN1A-222, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 585 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-222ENST00000544882 CCDC61Q9Y6R9 512 aa23.33■■□□□ 1.33
SCNN1A-222ENST00000544882 GJD4Q96KN9 370 aaPredicted RBP23.31■■□□□ 1.32
SCNN1A-222ENST00000544882 SRPK2P78362 688 aaKnown RBP23.3■■□□□ 1.32
SCNN1A-222ENST00000544882 ACEP12821 1306 aa23.29■■□□□ 1.32
SCNN1A-222ENST00000544882 PLEKHG3A1L390 1219 aa23.28■■□□□ 1.32
SCNN1A-222ENST00000544882 PLCH1Q4KWH8 1693 aa23.28■■□□□ 1.32
SCNN1A-222ENST00000544882 POLR3AO14802 1390 aaPredicted RBP23.27■■□□□ 1.32
SCNN1A-222ENST00000544882 FAM83GA6ND36 823 aa23.27■■□□□ 1.32
SCNN1A-222ENST00000544882 CABP2Q9NPB3 220 aa23.27■■□□□ 1.32
SCNN1A-222ENST00000544882 NWD2Q9ULI1 1742 aa23.27■■□□□ 1.32
SCNN1A-222ENST00000544882 GLI3P10071 1580 aa23.24■■□□□ 1.31
SCNN1A-222ENST00000544882 CARD11Q9BXL7 1154 aa23.24■■□□□ 1.31
SCNN1A-222ENST00000544882 PPIP5K1Q6PFW1 1433 aa23.24■■□□□ 1.31
SCNN1A-222ENST00000544882 CRYBG1Q9Y4K1 1723 aa23.23■■□□□ 1.31
SCNN1A-222ENST00000544882 VPS72Q15906 364 aa23.23■■□□□ 1.31
SCNN1A-222ENST00000544882 ATAD2Q6PL18 1390 aa23.23■■□□□ 1.31
SCNN1A-222ENST00000544882 CCDC9Q9Y3X0 531 aaKnown RBP23.22■■□□□ 1.31
SCNN1A-222ENST00000544882 NUTM2GQ5VZR2 741 aa23.21■■□□□ 1.31
SCNN1A-222ENST00000544882 EVC2Q86UK5 1308 aa23.21■■□□□ 1.31
SCNN1A-222ENST00000544882 CLSPNQ9HAW4 1339 aa23.21■■□□□ 1.31
SCNN1A-222ENST00000544882 COL14A1Q05707 1796 aaKnown RBP23.21■■□□□ 1.31
SCNN1A-222ENST00000544882 BTG4Q9NY30 223 aa23.19■■□□□ 1.3
SCNN1A-222ENST00000544882 PRDM11Q9NQV5 511 aa23.18■■□□□ 1.3
SCNN1A-222ENST00000544882 CABP1Q9NZU7 370 aa23.18■■□□□ 1.3
SCNN1A-222ENST00000544882 NRAPQ86VF7 1730 aa23.18■■□□□ 1.3
SCNN1A-222ENST00000544882 ABTB2Q8N961 1025 aa23.17■■□□□ 1.3
SCNN1A-222ENST00000544882 PHRF1Q9P1Y6 1649 aaKnown RBP23.16■■□□□ 1.3
SCNN1A-222ENST00000544882 SBNO2Q9Y2G9 1366 aa23.15■■□□□ 1.3
SCNN1A-222ENST00000544882 SEPT12Q8IYM1 358 aa23.15■■□□□ 1.3
SCNN1A-222ENST00000544882 CCER1Q8TC90 406 aaPredicted RBP23.15■■□□□ 1.3
SCNN1A-222ENST00000544882 KIAA0232Q92628 1395 aa23.14■■□□□ 1.3
SCNN1A-222ENST00000544882 BRWD3Q6RI45 1802 aa23.14■■□□□ 1.29
SCNN1A-222ENST00000544882 ZC3H6P61129 1189 aaKnown RBP23.13■■□□□ 1.29
SCNN1A-222ENST00000544882 CHRNA2Q15822 529 aa23.13■■□□□ 1.29
SCNN1A-222ENST00000544882 BRD4O60885 1362 aaPredicted RBP23.13■■□□□ 1.29
SCNN1A-222ENST00000544882 ONECUT3O60422 494 aaPredicted RBP23.12■■□□□ 1.29
SCNN1A-222ENST00000544882 AKAP12Q02952 1782 aa23.12■■□□□ 1.29
SCNN1A-222ENST00000544882 USP6P35125 1406 aa23.11■■□□□ 1.29
SCNN1A-222ENST00000544882 USP19O94966 1318 aa23.1■■□□□ 1.29
SCNN1A-222ENST00000544882 NLRP13Q86W25 1043 aa23.1■■□□□ 1.29
SCNN1A-222ENST00000544882 TESK2Q96S53 571 aa23.1■■□□□ 1.29
SCNN1A-222ENST00000544882 TIMELESSQ9UNS1 1208 aa23.1■■□□□ 1.29
SCNN1A-222ENST00000544882 ST20-MTHFSA0A0A6YYL1 179 aa23.09■■□□□ 1.29
SCNN1A-222ENST00000544882 NRKQ7Z2Y5 1582 aa23.09■■□□□ 1.29
SCNN1A-222ENST00000544882 SPATA31A5Q5VU36 1347 aa23.08■■□□□ 1.29
SCNN1A-222ENST00000544882 SPATA31A7Q8IWB4 1347 aa23.08■■□□□ 1.29
SCNN1A-222ENST00000544882 A0A0G2JS52 829 aa23.08■■□□□ 1.29
SCNN1A-222ENST00000544882 MYT1Q01538 1121 aa23.08■■□□□ 1.29
SCNN1A-222ENST00000544882 FAM98CQ17RN3 349 aaKnown RBP23.08■■□□□ 1.29
SCNN1A-222ENST00000544882 SSH2Q76I76 1423 aa23.07■■□□□ 1.28
SCNN1A-222ENST00000544882 CCDC125Q86Z20 511 aa23.06■■□□□ 1.28
SCNN1A-222ENST00000544882 STRN4Q9NRL3 753 aa23.06■■□□□ 1.28
SCNN1A-222ENST00000544882 USP47Q96K76 1375 aa23.05■■□□□ 1.28
SCNN1A-222ENST00000544882 GCP02774 474 aa23.05■■□□□ 1.28
SCNN1A-222ENST00000544882 NLRP6P59044 892 aa23.05■■□□□ 1.28
SCNN1A-222ENST00000544882 KRT27Q7Z3Y8 459 aa23.05■■□□□ 1.28
SCNN1A-222ENST00000544882 ZNF692Q9BU19 519 aaPredicted RBP23.05■■□□□ 1.28
SCNN1A-222ENST00000544882 CPDO75976 1380 aa23.04■■□□□ 1.28
SCNN1A-222ENST00000544882 PIK3C2AO00443 1686 aa23.04■■□□□ 1.28
SCNN1A-222ENST00000544882 CD163L1Q9NR16 1453 aa23.04■■□□□ 1.28
SCNN1A-222ENST00000544882 MON2Q7Z3U7 1717 aa23.03■■□□□ 1.28
SCNN1A-222ENST00000544882 CPSF1Q10570 1443 aaKnown RBP23.03■■□□□ 1.28
SCNN1A-222ENST00000544882 EVA1CP58658 441 aa23.02■■□□□ 1.28
SCNN1A-222ENST00000544882 TTC21BQ7Z4L5 1316 aa23.02■■□□□ 1.28
SCNN1A-222ENST00000544882 SPATA31A1Q5TZJ5 1347 aa23.01■■□□□ 1.27
SCNN1A-222ENST00000544882 CAMTA1Q9Y6Y1 1673 aa23■■□□□ 1.27
SCNN1A-222ENST00000544882 LMO7Q8WWI1 1683 aa23■■□□□ 1.27
SCNN1A-222ENST00000544882 BLMP54132 1417 aaPredicted RBP22.99■■□□□ 1.27
SCNN1A-222ENST00000544882 SLIT3O75094 1523 aa22.99■■□□□ 1.27
SCNN1A-222ENST00000544882 KTN1Q86UP2 1357 aaKnown RBP22.99■■□□□ 1.27
SCNN1A-222ENST00000544882 EP400Q96L91 3159 aa22.99■■□□□ 1.27
SCNN1A-222ENST00000544882 ZBTB7CA1YPR0 619 aa22.98■■□□□ 1.27
SCNN1A-222ENST00000544882 SLC12A5Q9H2X9 1139 aa22.98■■□□□ 1.27
SCNN1A-222ENST00000544882 TTC21AQ8NDW8 1320 aa22.98■■□□□ 1.27
SCNN1A-222ENST00000544882 THSD7AQ9UPZ6 1657 aa22.97■■□□□ 1.27
SCNN1A-222ENST00000544882 TMC1Q8TDI8 760 aa22.97■■□□□ 1.27
SCNN1A-222ENST00000544882 USP35Q9P2H5 1018 aa22.97■■□□□ 1.27
SCNN1A-222ENST00000544882 LARP1Q6PKG0 1096 aaKnown RBP22.96■■□□□ 1.27
SCNN1A-222ENST00000544882 SF3B2Q13435 895 aaKnown RBP22.95■■□□□ 1.26
SCNN1A-222ENST00000544882 PUS7Q96PZ0 661 aaKnown RBP22.93■■□□□ 1.26
SCNN1A-222ENST00000544882 COL5A2P05997 1499 aaPredicted RBP22.92■■□□□ 1.26
SCNN1A-222ENST00000544882 AATKQ6ZMQ8 1374 aa22.92■■□□□ 1.26
SCNN1A-222ENST00000544882 FAM182BQ5T319 152 aa22.92■■□□□ 1.26
SCNN1A-222ENST00000544882 BARGINQ6ZT62 677 aa22.92■■□□□ 1.26
SCNN1A-222ENST00000544882 HDGFL2Q7Z4V5 671 aaPredicted RBP22.92■■□□□ 1.26
SCNN1A-222ENST00000544882 DEFB132Q7Z7B7 95 aa22.92■■□□□ 1.26
SCNN1A-222ENST00000544882 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.92■■□□□ 1.26
SCNN1A-222ENST00000544882 KCNH5Q8NCM2 988 aa22.92■■□□□ 1.26
SCNN1A-222ENST00000544882 A0A1W2PP64 1363 aa22.91■■□□□ 1.26
SCNN1A-222ENST00000544882 SOX12O15370 315 aa22.91■■□□□ 1.26
SCNN1A-222ENST00000544882 TCP11L2Q8N4U5 519 aa22.91■■□□□ 1.26
SCNN1A-222ENST00000544882 ZRANB1Q9UGI0 708 aa22.91■■□□□ 1.26
SCNN1A-222ENST00000544882 COL18A1P39060 1754 aa22.89■■□□□ 1.26
SCNN1A-222ENST00000544882 TERF2IPQ9NYB0 399 aa22.89■■□□□ 1.25
SCNN1A-222ENST00000544882 MYOM1P52179 1685 aa22.88■■□□□ 1.25
SCNN1A-222ENST00000544882 USP54Q70EL1 1684 aa22.88■■□□□ 1.25
SCNN1A-222ENST00000544882 SLC24A1O60721 1099 aa22.88■■□□□ 1.25
SCNN1A-222ENST00000544882 ARHGEF25Q86VW2 580 aa22.88■■□□□ 1.25
SCNN1A-222ENST00000544882 TMF1P82094 1093 aa22.87■■□□□ 1.25
SCNN1A-222ENST00000544882 NME9Q86XW9 330 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms