RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 BTG4Q9NY30 223 aa18.68■□□□□ 0.58
CIT-214ENST00000544588 ZC3H6P61129 1189 aaKnown RBP18.67■□□□□ 0.58
CIT-214ENST00000544588 PPIP5K1Q6PFW1 1433 aa18.66■□□□□ 0.58
CIT-214ENST00000544588 ARHGEF28Q8N1W1 1705 aaKnown RBP18.66■□□□□ 0.58
CIT-214ENST00000544588 KIAA1210Q9ULL0 1709 aa18.66■□□□□ 0.58
CIT-214ENST00000544588 A0A0G2JS52 829 aa18.66■□□□□ 0.58
CIT-214ENST00000544588 MYT1Q01538 1121 aa18.66■□□□□ 0.58
CIT-214ENST00000544588 POLR3AO14802 1390 aaPredicted RBP18.66■□□□□ 0.58
CIT-214ENST00000544588 RGPD8O14715 1765 aaPredicted RBP18.65■□□□□ 0.58
CIT-214ENST00000544588 VPS72Q15906 364 aa18.65■□□□□ 0.58
CIT-214ENST00000544588 SLIT2O94813 1529 aa18.64■□□□□ 0.58
CIT-214ENST00000544588 CHRNA2Q15822 529 aa18.64■□□□□ 0.57
CIT-214ENST00000544588 SRCAPQ6ZRS2 3230 aa18.63■□□□□ 0.57
CIT-214ENST00000544588 NLRP13Q86W25 1043 aa18.63■□□□□ 0.57
CIT-214ENST00000544588 ZBTB7CA1YPR0 619 aa18.62■□□□□ 0.57
CIT-214ENST00000544588 ATAD2Q6PL18 1390 aa18.61■□□□□ 0.57
CIT-214ENST00000544588 SEPT12Q8IYM1 358 aa18.61■□□□□ 0.57
CIT-214ENST00000544588 STRN4Q9NRL3 753 aa18.61■□□□□ 0.57
CIT-214ENST00000544588 KIAA0232Q92628 1395 aa18.6■□□□□ 0.57
CIT-214ENST00000544588 EVA1CP58658 441 aa18.6■□□□□ 0.57
CIT-214ENST00000544588 NLRP6P59044 892 aa18.6■□□□□ 0.57
CIT-214ENST00000544588 TMC1Q8TDI8 760 aa18.6■□□□□ 0.57
CIT-214ENST00000544588 RALGAPBQ86X10 1494 aa18.59■□□□□ 0.57
CIT-214ENST00000544588 ZNF692Q9BU19 519 aaPredicted RBP18.59■□□□□ 0.57
CIT-214ENST00000544588 FAM98CQ17RN3 349 aaKnown RBP18.58■□□□□ 0.56
CIT-214ENST00000544588 TRPM1Q7Z4N2 1603 aa18.57■□□□□ 0.56
CIT-214ENST00000544588 GCP02774 474 aa18.57■□□□□ 0.56
CIT-214ENST00000544588 ST20-MTHFSA0A0A6YYL1 179 aa18.55■□□□□ 0.56
CIT-214ENST00000544588 USP35Q9P2H5 1018 aa18.55■□□□□ 0.56
CIT-214ENST00000544588 SOX12O15370 315 aa18.54■□□□□ 0.56
CIT-214ENST00000544588 USP6P35125 1406 aa18.54■□□□□ 0.56
CIT-214ENST00000544588 BRD4O60885 1362 aaPredicted RBP18.54■□□□□ 0.56
CIT-214ENST00000544588 TTC21BQ7Z4L5 1316 aa18.53■□□□□ 0.56
CIT-214ENST00000544588 ONECUT3O60422 494 aaPredicted RBP18.53■□□□□ 0.56
CIT-214ENST00000544588 KRT27Q7Z3Y8 459 aa18.53■□□□□ 0.56
CIT-214ENST00000544588 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.53■□□□□ 0.56
CIT-214ENST00000544588 CCER1Q8TC90 406 aaPredicted RBP18.53■□□□□ 0.56
CIT-214ENST00000544588 TRPM3Q9HCF6 1732 aaPredicted RBP18.53■□□□□ 0.56
CIT-214ENST00000544588 USP19O94966 1318 aa18.52■□□□□ 0.56
CIT-214ENST00000544588 SPATA31A5Q5VU36 1347 aa18.52■□□□□ 0.56
CIT-214ENST00000544588 SPATA31A7Q8IWB4 1347 aa18.52■□□□□ 0.56
CIT-214ENST00000544588 HDGFL2Q7Z4V5 671 aaPredicted RBP18.52■□□□□ 0.56
CIT-214ENST00000544588 SLC12A5Q9H2X9 1139 aa18.52■□□□□ 0.56
CIT-214ENST00000544588 QRICH2Q9H0J4 1663 aa18.51■□□□□ 0.55
CIT-214ENST00000544588 KTN1Q86UP2 1357 aaKnown RBP18.51■□□□□ 0.55
CIT-214ENST00000544588 ITSN1Q15811 1721 aa18.5■□□□□ 0.55
CIT-214ENST00000544588 SF3B2Q13435 895 aaKnown RBP18.5■□□□□ 0.55
CIT-214ENST00000544588 SBNO2Q9Y2G9 1366 aa18.5■□□□□ 0.55
CIT-214ENST00000544588 ALS2Q96Q42 1657 aa18.5■□□□□ 0.55
CIT-214ENST00000544588 LARP1Q6PKG0 1096 aaKnown RBP18.49■□□□□ 0.55
CIT-214ENST00000544588 CCDC125Q86Z20 511 aa18.49■□□□□ 0.55
CIT-214ENST00000544588 SLC24A1O60721 1099 aa18.48■□□□□ 0.55
CIT-214ENST00000544588 TERF2IPQ9NYB0 399 aa18.48■□□□□ 0.55
CIT-214ENST00000544588 TIMELESSQ9UNS1 1208 aa18.48■□□□□ 0.55
CIT-214ENST00000544588 SPATA31A1Q5TZJ5 1347 aa18.48■□□□□ 0.55
CIT-214ENST00000544588 TTC21AQ8NDW8 1320 aa18.48■□□□□ 0.55
CIT-214ENST00000544588 GLI3P10071 1580 aa18.47■□□□□ 0.55
CIT-214ENST00000544588 KCNH5Q8NCM2 988 aa18.47■□□□□ 0.55
CIT-214ENST00000544588 TESK2Q96S53 571 aa18.47■□□□□ 0.55
CIT-214ENST00000544588 TOPAZ1Q8N9V7 1692 aa18.47■□□□□ 0.55
CIT-214ENST00000544588 CLSPNQ9HAW4 1339 aa18.47■□□□□ 0.55
CIT-214ENST00000544588 MARF1Q9Y4F3 1742 aaKnown RBP18.46■□□□□ 0.55
CIT-214ENST00000544588 CPDO75976 1380 aa18.46■□□□□ 0.55
CIT-214ENST00000544588 FAM182BQ5T319 152 aa18.46■□□□□ 0.55
CIT-214ENST00000544588 ZRANB1Q9UGI0 708 aa18.46■□□□□ 0.55
CIT-214ENST00000544588 TMF1P82094 1093 aa18.45■□□□□ 0.54
CIT-214ENST00000544588 PUS7Q96PZ0 661 aaKnown RBP18.45■□□□□ 0.54
CIT-214ENST00000544588 SSH2Q76I76 1423 aa18.45■□□□□ 0.54
CIT-214ENST00000544588 CPSF1Q10570 1443 aaKnown RBP18.44■□□□□ 0.54
CIT-214ENST00000544588 NME9Q86XW9 330 aa18.44■□□□□ 0.54
CIT-214ENST00000544588 TCP11L2Q8N4U5 519 aa18.44■□□□□ 0.54
CIT-214ENST00000544588 USP47Q96K76 1375 aa18.43■□□□□ 0.54
CIT-214ENST00000544588 COL14A1Q05707 1796 aaKnown RBP18.43■□□□□ 0.54
CIT-214ENST00000544588 CSB-PGBD3P0DP91 1061 aa18.43■□□□□ 0.54
CIT-214ENST00000544588 TOM1L2Q6ZVM7 507 aa18.43■□□□□ 0.54
CIT-214ENST00000544588 PDE3BQ13370 1112 aa18.42■□□□□ 0.54
CIT-214ENST00000544588 DEFB132Q7Z7B7 95 aa18.42■□□□□ 0.54
CIT-214ENST00000544588 ABCA3Q99758 1704 aa18.42■□□□□ 0.54
CIT-214ENST00000544588 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.42■□□□□ 0.54
CIT-214ENST00000544588 PLCH1Q4KWH8 1693 aa18.41■□□□□ 0.54
CIT-214ENST00000544588 ARHGEF25Q86VW2 580 aa18.41■□□□□ 0.54
CIT-214ENST00000544588 BARGINQ6ZT62 677 aa18.4■□□□□ 0.54
CIT-214ENST00000544588 AXIN2Q9Y2T1 843 aa18.4■□□□□ 0.54
CIT-214ENST00000544588 AATKQ6ZMQ8 1374 aa18.4■□□□□ 0.54
CIT-214ENST00000544588 NWD2Q9ULI1 1742 aa18.4■□□□□ 0.54
CIT-214ENST00000544588 BLMP54132 1417 aaPredicted RBP18.4■□□□□ 0.54
CIT-214ENST00000544588 CAMTA1Q9Y6Y1 1673 aa18.38■□□□□ 0.53
CIT-214ENST00000544588 CDCA8Q53HL2 280 aa18.38■□□□□ 0.53
CIT-214ENST00000544588 THRAP3Q9Y2W1 955 aaKnown RBP18.38■□□□□ 0.53
CIT-214ENST00000544588 A0A1W2PP64 1363 aa18.38■□□□□ 0.53
CIT-214ENST00000544588 POLR3GLQ9BT43 218 aa18.37■□□□□ 0.53
CIT-214ENST00000544588 NRKQ7Z2Y5 1582 aa18.37■□□□□ 0.53
CIT-214ENST00000544588 BAG6P46379 1132 aa18.36■□□□□ 0.53
CIT-214ENST00000544588 FAM196AQ6ZSG2 479 aa18.36■□□□□ 0.53
CIT-214ENST00000544588 PHRF1Q9P1Y6 1649 aaKnown RBP18.35■□□□□ 0.53
CIT-214ENST00000544588 COG3Q96JB2 828 aa18.35■□□□□ 0.53
CIT-214ENST00000544588 COL5A2P05997 1499 aaPredicted RBP18.34■□□□□ 0.53
CIT-214ENST00000544588 CD163L1Q9NR16 1453 aa18.34■□□□□ 0.53
CIT-214ENST00000544588 EDC4Q6P2E9 1401 aaKnown RBP18.34■□□□□ 0.53
CIT-214ENST00000544588 USP31Q70CQ4 1352 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms