RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 SOX12O15370 315 aa15.85■□□□□ 0.13
PDZD4-209ENST00000544474 NPM1P06748 294 aaKnown RBP eCLIP15.85■□□□□ 0.13
PDZD4-209ENST00000544474 SCAPERQ9BY12 1400 aa15.85■□□□□ 0.13
PDZD4-209ENST00000544474 NUTM2FA1L443 756 aa15.85■□□□□ 0.13
PDZD4-209ENST00000544474 VGLL3A8MV65 326 aa15.85■□□□□ 0.13
PDZD4-209ENST00000544474 ERCC6L2Q5T890 1561 aa15.85■□□□□ 0.13
PDZD4-209ENST00000544474 ADGRF5Q8IZF2 1346 aa15.84■□□□□ 0.13
PDZD4-209ENST00000544474 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.84■□□□□ 0.13
PDZD4-209ENST00000544474 DYNC1I1O14576 645 aa15.84■□□□□ 0.13
PDZD4-209ENST00000544474 CARD14Q9BXL6 1004 aa15.84■□□□□ 0.13
PDZD4-209ENST00000544474 SPDYE4A6NLX3 237 aa15.84■□□□□ 0.13
PDZD4-209ENST00000544474 CDK11BP21127 795 aaKnown RBP15.84■□□□□ 0.13
PDZD4-209ENST00000544474 EXOSC9Q06265 439 aaKnown RBP15.84■□□□□ 0.13
PDZD4-209ENST00000544474 CCDC94Q9BW85 323 aaPredicted RBP15.84■□□□□ 0.13
PDZD4-209ENST00000544474 ZSCAN20P17040 1043 aaPredicted RBP15.84■□□□□ 0.13
PDZD4-209ENST00000544474 C17orf53Q8N3J3 647 aaPredicted RBP15.84■□□□□ 0.13
PDZD4-209ENST00000544474 KIF20AO95235 890 aa15.83■□□□□ 0.13
PDZD4-209ENST00000544474 NPC1L1Q9UHC9 1359 aa15.83■□□□□ 0.12
PDZD4-209ENST00000544474 ZKSCAN2Q63HK3 967 aa15.83■□□□□ 0.12
PDZD4-209ENST00000544474 TMEM51Q9NW97 253 aa15.83■□□□□ 0.12
PDZD4-209ENST00000544474 TRAPPC8Q9Y2L5 1435 aa15.82■□□□□ 0.12
PDZD4-209ENST00000544474 SYCE3A1L190 88 aa15.81■□□□□ 0.12
PDZD4-209ENST00000544474 MTHFSP49914 203 aa15.81■□□□□ 0.12
PDZD4-209ENST00000544474 PKP1Q13835 747 aa15.81■□□□□ 0.12
PDZD4-209ENST00000544474 GTPBP4Q9BZE4 634 aaKnown RBP15.81■□□□□ 0.12
PDZD4-209ENST00000544474 GDPD2Q9HCC8 539 aa15.81■□□□□ 0.12
PDZD4-209ENST00000544474 LAMC1P11047 1609 aa15.81■□□□□ 0.12
PDZD4-209ENST00000544474 STAG3Q9UJ98 1225 aa15.81■□□□□ 0.12
PDZD4-209ENST00000544474 GAS2L2Q8NHY3 880 aa15.81■□□□□ 0.12
PDZD4-209ENST00000544474 NOB1Q9ULX3 412 aaKnown RBP15.81■□□□□ 0.12
PDZD4-209ENST00000544474 KANK1Q14678 1352 aa15.81■□□□□ 0.12
PDZD4-209ENST00000544474 CHMP3Q9Y3E7 222 aa15.8■□□□□ 0.12
PDZD4-209ENST00000544474 LETM1O95202 739 aaPredicted RBP15.79■□□□□ 0.12
PDZD4-209ENST00000544474 WDR63Q8IWG1 891 aa15.79■□□□□ 0.12
PDZD4-209ENST00000544474 DUOX2Q9NRD8 1548 aa15.79■□□□□ 0.12
PDZD4-209ENST00000544474 CABP2Q9NPB3 220 aa15.79■□□□□ 0.12
PDZD4-209ENST00000544474 CFAP65Q6ZU64 1925 aaKnown RBP15.79■□□□□ 0.12
PDZD4-209ENST00000544474 MVPQ14764 893 aaKnown RBP15.78■□□□□ 0.12
PDZD4-209ENST00000544474 CYB5RLQ6IPT4 315 aa15.78■□□□□ 0.12
PDZD4-209ENST00000544474 TMEM57Q8N5G2 664 aa15.78■□□□□ 0.12
PDZD4-209ENST00000544474 ABCC2Q92887 1545 aa15.78■□□□□ 0.12
PDZD4-209ENST00000544474 PRIM1P49642 420 aaKnown RBP15.78■□□□□ 0.12
PDZD4-209ENST00000544474 PPP1R9BQ96SB3 815 aa15.78■□□□□ 0.12
PDZD4-209ENST00000544474 THUMPD2Q9BTF0 503 aaKnown RBP15.77■□□□□ 0.12
PDZD4-209ENST00000544474 MYO5CQ9NQX4 1742 aa15.77■□□□□ 0.11
PDZD4-209ENST00000544474 CLASP1Q7Z460 1538 aa15.77■□□□□ 0.11
PDZD4-209ENST00000544474 SYNMO15061 1565 aa15.77■□□□□ 0.11
PDZD4-209ENST00000544474 SRPK2P78362 688 aaKnown RBP15.77■□□□□ 0.11
PDZD4-209ENST00000544474 CSPP1Q1MSJ5 1256 aa15.76■□□□□ 0.11
PDZD4-209ENST00000544474 UNC13BO14795 1591 aa15.76■□□□□ 0.11
PDZD4-209ENST00000544474 POLR3AO14802 1390 aaPredicted RBP15.76■□□□□ 0.11
PDZD4-209ENST00000544474 ATP10AO60312 1499 aa15.76■□□□□ 0.11
PDZD4-209ENST00000544474 CDC42BPBQ9Y5S2 1711 aa15.76■□□□□ 0.11
PDZD4-209ENST00000544474 SSH1Q8WYL5 1049 aa15.75■□□□□ 0.11
PDZD4-209ENST00000544474 RBSNQ9H1K0 784 aa15.75■□□□□ 0.11
PDZD4-209ENST00000544474 MINK1Q8N4C8 1332 aaPredicted RBP15.75■□□□□ 0.11
PDZD4-209ENST00000544474 NSD3Q9BZ95 1437 aa15.75■□□□□ 0.11
PDZD4-209ENST00000544474 TRIM27P14373 513 aa15.75■□□□□ 0.11
PDZD4-209ENST00000544474 SKOR2Q2VWA4 1001 aaPredicted RBP15.75■□□□□ 0.11
PDZD4-209ENST00000544474 LARP6Q9BRS8 491 aaKnown RBP15.75■□□□□ 0.11
PDZD4-209ENST00000544474 PREX2Q70Z35 1606 aa15.75■□□□□ 0.11
PDZD4-209ENST00000544474 IQGAP3Q86VI3 1631 aa15.74■□□□□ 0.11
PDZD4-209ENST00000544474 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.74■□□□□ 0.11
PDZD4-209ENST00000544474 MAST1Q9Y2H9 1570 aa15.74■□□□□ 0.11
PDZD4-209ENST00000544474 GGNBP2Q9H3C7 697 aa15.74■□□□□ 0.11
PDZD4-209ENST00000544474 TAF3Q5VWG9 929 aa15.74■□□□□ 0.11
PDZD4-209ENST00000544474 SASS6Q6UVJ0 657 aa15.74■□□□□ 0.11
PDZD4-209ENST00000544474 ZGPATQ8N5A5 531 aaKnown RBP15.74■□□□□ 0.11
PDZD4-209ENST00000544474 BAG4O95429 457 aaKnown RBP15.73■□□□□ 0.11
PDZD4-209ENST00000544474 DDX19BQ9UMR2 479 aa15.73■□□□□ 0.11
PDZD4-209ENST00000544474 TAOK2Q9UL54 1235 aa15.72■□□□□ 0.11
PDZD4-209ENST00000544474 K7ELQ4 463 aaPredicted RBP15.72■□□□□ 0.11
PDZD4-209ENST00000544474 ZNF500O60304 480 aaPredicted RBP15.71■□□□□ 0.1
PDZD4-209ENST00000544474 SPC24Q8NBT2 197 aa15.71■□□□□ 0.1
PDZD4-209ENST00000544474 CGNQ9P2M7 1197 aaKnown RBP15.71■□□□□ 0.1
PDZD4-209ENST00000544474 ZSCAN23Q3MJ62 389 aa15.7■□□□□ 0.1
PDZD4-209ENST00000544474 C16orf71Q8IYS4 520 aaPredicted RBP15.7■□□□□ 0.1
PDZD4-209ENST00000544474 TRERF1Q96PN7 1200 aa15.7■□□□□ 0.1
PDZD4-209ENST00000544474 ZBTB9Q96C00 473 aa15.7■□□□□ 0.1
PDZD4-209ENST00000544474 TTC12Q9H892 705 aaPredicted RBP15.7■□□□□ 0.1
PDZD4-209ENST00000544474 NOL7Q9UMY1 257 aaKnown RBP15.69■□□□□ 0.1
PDZD4-209ENST00000544474 TSHZ3Q63HK5 1081 aa15.69■□□□□ 0.1
PDZD4-209ENST00000544474 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.69■□□□□ 0.1
PDZD4-209ENST00000544474 TTC37Q6PGP7 1564 aa15.69■□□□□ 0.1
PDZD4-209ENST00000544474 NPHP1O15259 732 aa15.69■□□□□ 0.1
PDZD4-209ENST00000544474 PTMSP20962 102 aa15.69■□□□□ 0.1
PDZD4-209ENST00000544474 HS1BP3Q53T59 392 aa15.69■□□□□ 0.1
PDZD4-209ENST00000544474 IPO8O15397 1037 aaKnown RBP15.68■□□□□ 0.1
PDZD4-209ENST00000544474 TBC1D9Q6ZT07 1266 aa15.68■□□□□ 0.1
PDZD4-209ENST00000544474 SMARCA5O60264 1052 aaPredicted RBP15.68■□□□□ 0.1
PDZD4-209ENST00000544474 HMOX1P09601 288 aa15.68■□□□□ 0.1
PDZD4-209ENST00000544474 CHD1LQ86WJ1 897 aa15.68■□□□□ 0.1
PDZD4-209ENST00000544474 KLHL34Q8N239 644 aa15.68■□□□□ 0.1
PDZD4-209ENST00000544474 MADDQ8WXG6 1647 aa15.68■□□□□ 0.1
PDZD4-209ENST00000544474 ATF7IPQ6VMQ6 1270 aa15.68■□□□□ 0.1
PDZD4-209ENST00000544474 ERVK-7P63135 1459 aa15.67■□□□□ 0.1
PDZD4-209ENST00000544474 KDM5AP29375 1690 aaKnown RBP15.67■□□□□ 0.1
PDZD4-209ENST00000544474 RNF17Q9BXT8 1623 aaKnown RBP15.67■□□□□ 0.1
PDZD4-209ENST00000544474 NSFL1CQ9UNZ2 370 aaKnown RBP15.67■□□□□ 0.1
PDZD4-209ENST00000544474 ATAD2Q6PL18 1390 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms