RNA–Protein interactions for RNA: ENST00000544154.1

NPIPB3-213, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-213ENST00000544154 RBM46Q8TBY0 533 aaKnown RBP4.96□□□□□ -1.62
NPIPB3-213ENST00000544154 DXOO77932 396 aaKnown RBP4.95□□□□□ -1.62
NPIPB3-213ENST00000544154 ATP6V1AP38606 617 aa4.95□□□□□ -1.62
NPIPB3-213ENST00000544154 WDR4P57081 412 aaKnown RBP4.95□□□□□ -1.62
NPIPB3-213ENST00000544154 SRSF11Q05519 484 aaKnown RBP4.95□□□□□ -1.62
NPIPB3-213ENST00000544154 NNTQ13423 1086 aa4.95□□□□□ -1.62
NPIPB3-213ENST00000544154 ZFP64Q9NPA5 681 aa4.95□□□□□ -1.62
NPIPB3-213ENST00000544154 ENAMQ9NRM1 1142 aa4.95□□□□□ -1.62
NPIPB3-213ENST00000544154 SCO2A0A1W2PP80 73 aa4.94□□□□□ -1.62
NPIPB3-213ENST00000544154 CHGAP10645 457 aaKnown RBP4.94□□□□□ -1.62
NPIPB3-213ENST00000544154 FAM161AQ3B820 660 aa4.94□□□□□ -1.62
NPIPB3-213ENST00000544154 COL8A1P27658 744 aa4.93□□□□□ -1.62
NPIPB3-213ENST00000544154 SH3RF1Q7Z6J0 888 aa4.93□□□□□ -1.62
NPIPB3-213ENST00000544154 CCDC155Q8N6L0 562 aa4.93□□□□□ -1.62
NPIPB3-213ENST00000544154 TLL2Q9Y6L7 1015 aa4.93□□□□□ -1.62
NPIPB3-213ENST00000544154 ADH1CP00326 375 aa4.92□□□□□ -1.62
NPIPB3-213ENST00000544154 YBX3P16989 372 aaKnown RBP eCLIP4.92□□□□□ -1.62
NPIPB3-213ENST00000544154 PODNQ7Z5L7 613 aa4.92□□□□□ -1.62
NPIPB3-213ENST00000544154 FZD5Q13467 585 aa4.91□□□□□ -1.62
NPIPB3-213ENST00000544154 GAS6Q14393 721 aa4.91□□□□□ -1.62
NPIPB3-213ENST00000544154 CCDC24Q8N4L8 307 aa4.91□□□□□ -1.62
NPIPB3-213ENST00000544154 ZFAND3Q9H8U3 227 aa4.91□□□□□ -1.62
NPIPB3-213ENST00000544154 PTCRAQ6ISU1 281 aaPredicted RBP4.9□□□□□ -1.63
NPIPB3-213ENST00000544154 SV2AQ7L0J3 742 aa4.9□□□□□ -1.63
NPIPB3-213ENST00000544154 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.89□□□□□ -1.63
NPIPB3-213ENST00000544154 SLC35F4A4IF30 521 aa4.89□□□□□ -1.63
NPIPB3-213ENST00000544154 ITGA6P23229 1130 aa4.89□□□□□ -1.63
NPIPB3-213ENST00000544154 SH3BP2P78314 561 aa4.89□□□□□ -1.63
NPIPB3-213ENST00000544154 C1QTNF9BB2RNN3 333 aa4.88□□□□□ -1.63
NPIPB3-213ENST00000544154 BMP2P12643 396 aa4.88□□□□□ -1.63
NPIPB3-213ENST00000544154 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.88□□□□□ -1.63
NPIPB3-213ENST00000544154 NBPF11Q86T75 865 aa4.88□□□□□ -1.63
NPIPB3-213ENST00000544154 MPNDQ8N594 471 aa4.88□□□□□ -1.63
NPIPB3-213ENST00000544154 SNRPNP63162 240 aaKnown RBP4.87□□□□□ -1.63
NPIPB3-213ENST00000544154 LINC00528Q8N1L1 170 aa4.87□□□□□ -1.63
NPIPB3-213ENST00000544154 ITPKCQ96DU7 683 aa4.87□□□□□ -1.63
NPIPB3-213ENST00000544154 CDC14CA4D256 554 aa4.86□□□□□ -1.63
NPIPB3-213ENST00000544154 ZIC2O95409 532 aaPredicted RBP4.86□□□□□ -1.63
NPIPB3-213ENST00000544154 DOC2BQ14184 412 aa4.86□□□□□ -1.63
NPIPB3-213ENST00000544154 CD163Q86VB7 1156 aa4.86□□□□□ -1.63
NPIPB3-213ENST00000544154 NEDD1Q8NHV4 660 aa4.86□□□□□ -1.63
NPIPB3-213ENST00000544154 BCRP11274 1271 aa4.85□□□□□ -1.63
NPIPB3-213ENST00000544154 RSPH4AQ5TD94 716 aa4.85□□□□□ -1.63
NPIPB3-213ENST00000544154 ALYREFQ86V81 257 aaKnown RBP4.85□□□□□ -1.63
NPIPB3-213ENST00000544154 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
NPIPB3-213ENST00000544154 MEIOBQ8N635 442 aa4.84□□□□□ -1.63
NPIPB3-213ENST00000544154 FMNL2Q96PY5 1086 aa4.84□□□□□ -1.63
NPIPB3-213ENST00000544154 PTGDRQ13258 359 aa4.83□□□□□ -1.64
NPIPB3-213ENST00000544154 MCTP1Q6DN14 999 aa4.83□□□□□ -1.64
NPIPB3-213ENST00000544154 USB1Q9BQ65 265 aaKnown RBP4.83□□□□□ -1.64
NPIPB3-213ENST00000544154 PLEKHG3A1L390 1219 aa4.82□□□□□ -1.64
NPIPB3-213ENST00000544154 CHRNA4P43681 627 aa4.82□□□□□ -1.64
NPIPB3-213ENST00000544154 GCGRP47871 477 aa4.82□□□□□ -1.64
NPIPB3-213ENST00000544154 PXYLP1Q8TE99 480 aa4.82□□□□□ -1.64
NPIPB3-213ENST00000544154 ACDQ96AP0 544 aa4.82□□□□□ -1.64
NPIPB3-213ENST00000544154 FIGNL2A6NMB9 653 aa4.81□□□□□ -1.64
NPIPB3-213ENST00000544154 TTLL8A6PVC2 850 aa4.81□□□□□ -1.64
NPIPB3-213ENST00000544154 TXKP42681 527 aa4.81□□□□□ -1.64
NPIPB3-213ENST00000544154 RSPO4Q2I0M5 234 aaPredicted RBP4.81□□□□□ -1.64
NPIPB3-213ENST00000544154 ARIH1Q9Y4X5 557 aaPredicted RBP4.81□□□□□ -1.64
NPIPB3-213ENST00000544154 UPP2O95045 317 aa4.79□□□□□ -1.64
NPIPB3-213ENST00000544154 NR3C2P08235 984 aa4.79□□□□□ -1.64
NPIPB3-213ENST00000544154 RDH13Q8NBN7 331 aa4.79□□□□□ -1.64
NPIPB3-213ENST00000544154 IGF1RP08069 1367 aa4.78□□□□□ -1.64
NPIPB3-213ENST00000544154 Q3C1V9 767 aa4.78□□□□□ -1.64
NPIPB3-213ENST00000544154 NKAPLQ5M9Q1 402 aa4.78□□□□□ -1.64
NPIPB3-213ENST00000544154 SUV39H2Q9H5I1 410 aa4.78□□□□□ -1.64
NPIPB3-213ENST00000544154 LRRC4BQ9NT99 713 aa4.78□□□□□ -1.64
NPIPB3-213ENST00000544154 CUEDC1Q9NWM3 386 aaPredicted RBP4.78□□□□□ -1.64
NPIPB3-213ENST00000544154 SENP3-EIF4A1A0A087X0R7 540 aa4.77□□□□□ -1.65
NPIPB3-213ENST00000544154 VARSP26640 1264 aaKnown RBP4.77□□□□□ -1.65
NPIPB3-213ENST00000544154 MBIPQ9NS73 344 aa4.77□□□□□ -1.65
NPIPB3-213ENST00000544154 CDK15Q96Q40 435 aa4.76□□□□□ -1.65
NPIPB3-213ENST00000544154 COL17A1Q9UMD9 1497 aaPredicted RBP4.75□□□□□ -1.65
NPIPB3-213ENST00000544154 PAX4O43316 350 aa4.75□□□□□ -1.65
NPIPB3-213ENST00000544154 HYAL3O43820 417 aaPredicted RBP4.75□□□□□ -1.65
NPIPB3-213ENST00000544154 TSEN34Q9BSV6 310 aaKnown RBP4.75□□□□□ -1.65
NPIPB3-213ENST00000544154 MKL2Q9ULH7 1088 aa4.75□□□□□ -1.65
NPIPB3-213ENST00000544154 OIP5O43482 229 aa4.74□□□□□ -1.65
NPIPB3-213ENST00000544154 HOXB4P17483 251 aaPredicted RBP4.74□□□□□ -1.65
NPIPB3-213ENST00000544154 JUNDP17535 347 aa4.74□□□□□ -1.65
NPIPB3-213ENST00000544154 LRP8Q14114 963 aa4.74□□□□□ -1.65
NPIPB3-213ENST00000544154 GRIN2CQ14957 1233 aa4.74□□□□□ -1.65
NPIPB3-213ENST00000544154 LINC01559Q495D7 138 aa4.74□□□□□ -1.65
NPIPB3-213ENST00000544154 LINC00114Q6XXX2 140 aa4.74□□□□□ -1.65
NPIPB3-213ENST00000544154 DAXXQ9UER7 740 aaPredicted RBP4.74□□□□□ -1.65
NPIPB3-213ENST00000544154 DDX11L8A8MPP1 907 aa4.73□□□□□ -1.65
NPIPB3-213ENST00000544154 GRM5P41594 1212 aa4.73□□□□□ -1.65
NPIPB3-213ENST00000544154 BAP1Q92560 729 aa4.73□□□□□ -1.65
NPIPB3-213ENST00000544154 SHISA8B8ZZ34 492 aa4.72□□□□□ -1.65
NPIPB3-213ENST00000544154 METTL3Q86U44 580 aaKnown RBP4.72□□□□□ -1.65
NPIPB3-213ENST00000544154 NUDT12Q9BQG2 462 aa4.72□□□□□ -1.65
NPIPB3-213ENST00000544154 DYRK3O43781 588 aa4.71□□□□□ -1.66
NPIPB3-213ENST00000544154 OATP04181 439 aa4.71□□□□□ -1.66
NPIPB3-213ENST00000544154 NR5A1Q13285 461 aa4.7□□□□□ -1.66
NPIPB3-213ENST00000544154 GRIPAP1Q4V328 841 aa4.7□□□□□ -1.66
NPIPB3-213ENST00000544154 PRSS36Q5K4E3 855 aa4.7□□□□□ -1.66
NPIPB3-213ENST00000544154 C1orf229Q6ZS94 237 aaPredicted RBP4.7□□□□□ -1.66
NPIPB3-213ENST00000544154 ZNF511Q8NB15 262 aa4.7□□□□□ -1.66
NPIPB3-213ENST00000544154 CCER1Q8TC90 406 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms