RNA–Protein interactions for RNA: ENST00000544151.1

LDHB-210, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-210ENST00000544151 PHRF1Q9P1Y6 1649 aaKnown RBP22.42■■□□□ 1.18
LDHB-210ENST00000544151 SRPK2P78362 688 aaKnown RBP22.4■■□□□ 1.18
LDHB-210ENST00000544151 PAK3O75914 559 aaPredicted RBP22.39■■□□□ 1.17
LDHB-210ENST00000544151 PPIP5K1Q6PFW1 1433 aa22.39■■□□□ 1.17
LDHB-210ENST00000544151 POLR3AO14802 1390 aaPredicted RBP22.38■■□□□ 1.17
LDHB-210ENST00000544151 NRAPQ86VF7 1730 aa22.38■■□□□ 1.17
LDHB-210ENST00000544151 NBPF8Q3BBV2 869 aa22.38■■□□□ 1.17
LDHB-210ENST00000544151 CCDC61Q9Y6R9 512 aa22.38■■□□□ 1.17
LDHB-210ENST00000544151 RALGAPBQ86X10 1494 aa22.38■■□□□ 1.17
LDHB-210ENST00000544151 COL14A1Q05707 1796 aaKnown RBP22.38■■□□□ 1.17
LDHB-210ENST00000544151 CABP2Q9NPB3 220 aa22.37■■□□□ 1.17
LDHB-210ENST00000544151 GLI3P10071 1580 aa22.37■■□□□ 1.17
LDHB-210ENST00000544151 ACEP12821 1306 aa22.36■■□□□ 1.17
LDHB-210ENST00000544151 UNC5CLQ8IV45 518 aa22.33■■□□□ 1.17
LDHB-210ENST00000544151 PLEKHG3A1L390 1219 aa22.32■■□□□ 1.16
LDHB-210ENST00000544151 NRKQ7Z2Y5 1582 aa22.32■■□□□ 1.16
LDHB-210ENST00000544151 EVC2Q86UK5 1308 aa22.31■■□□□ 1.16
LDHB-210ENST00000544151 AKAP12Q02952 1782 aa22.31■■□□□ 1.16
LDHB-210ENST00000544151 PPP4R3CPQ6ZMV5 832 aa22.3■■□□□ 1.16
LDHB-210ENST00000544151 GJD4Q96KN9 370 aaPredicted RBP22.3■■□□□ 1.16
LDHB-210ENST00000544151 CARD11Q9BXL7 1154 aa22.3■■□□□ 1.16
LDHB-210ENST00000544151 BRWD3Q6RI45 1802 aa22.29■■□□□ 1.16
LDHB-210ENST00000544151 UPF1Q92900 1129 aaKnown RBP eCLIP22.29■■□□□ 1.16
LDHB-210ENST00000544151 NUTM2GQ5VZR2 741 aa22.27■■□□□ 1.16
LDHB-210ENST00000544151 ATAD2Q6PL18 1390 aa22.26■■□□□ 1.15
LDHB-210ENST00000544151 USP6P35125 1406 aa22.26■■□□□ 1.15
LDHB-210ENST00000544151 FAM83GA6ND36 823 aa22.26■■□□□ 1.15
LDHB-210ENST00000544151 PIK3C2AO00443 1686 aa22.26■■□□□ 1.15
LDHB-210ENST00000544151 SBNO2Q9Y2G9 1366 aa22.25■■□□□ 1.15
LDHB-210ENST00000544151 CCDC9Q9Y3X0 531 aaKnown RBP22.25■■□□□ 1.15
LDHB-210ENST00000544151 MON2Q7Z3U7 1717 aa22.24■■□□□ 1.15
LDHB-210ENST00000544151 VPS72Q15906 364 aa22.24■■□□□ 1.15
LDHB-210ENST00000544151 BTG4Q9NY30 223 aa22.24■■□□□ 1.15
LDHB-210ENST00000544151 CABP1Q9NZU7 370 aa22.24■■□□□ 1.15
LDHB-210ENST00000544151 KIAA0232Q92628 1395 aa22.24■■□□□ 1.15
LDHB-210ENST00000544151 ABTB2Q8N961 1025 aa22.23■■□□□ 1.15
LDHB-210ENST00000544151 PRDM11Q9NQV5 511 aa22.23■■□□□ 1.15
LDHB-210ENST00000544151 EP400Q96L91 3159 aa22.23■■□□□ 1.15
LDHB-210ENST00000544151 BRD4O60885 1362 aaPredicted RBP22.23■■□□□ 1.15
LDHB-210ENST00000544151 USP19O94966 1318 aa22.2■■□□□ 1.14
LDHB-210ENST00000544151 LMO7Q8WWI1 1683 aa22.19■■□□□ 1.14
LDHB-210ENST00000544151 ZC3H6P61129 1189 aaKnown RBP22.18■■□□□ 1.14
LDHB-210ENST00000544151 SLIT3O75094 1523 aa22.17■■□□□ 1.14
LDHB-210ENST00000544151 SSH2Q76I76 1423 aa22.17■■□□□ 1.14
LDHB-210ENST00000544151 CHRNA2Q15822 529 aa22.17■■□□□ 1.14
LDHB-210ENST00000544151 NLRP13Q86W25 1043 aa22.16■■□□□ 1.14
LDHB-210ENST00000544151 PCGF6Q9BYE7 350 aa22.16■■□□□ 1.14
LDHB-210ENST00000544151 A0A0G2JS52 829 aa22.15■■□□□ 1.14
LDHB-210ENST00000544151 MYT1Q01538 1121 aa22.15■■□□□ 1.14
LDHB-210ENST00000544151 SEPT12Q8IYM1 358 aa22.15■■□□□ 1.14
LDHB-210ENST00000544151 THSD7AQ9UPZ6 1657 aa22.14■■□□□ 1.14
LDHB-210ENST00000544151 CPSF1Q10570 1443 aaKnown RBP22.14■■□□□ 1.13
LDHB-210ENST00000544151 CPDO75976 1380 aa22.13■■□□□ 1.13
LDHB-210ENST00000544151 KTN1Q86UP2 1357 aaKnown RBP22.12■■□□□ 1.13
LDHB-210ENST00000544151 CAMTA1Q9Y6Y1 1673 aa22.12■■□□□ 1.13
LDHB-210ENST00000544151 FAM98CQ17RN3 349 aaKnown RBP22.12■■□□□ 1.13
LDHB-210ENST00000544151 STRN4Q9NRL3 753 aa22.12■■□□□ 1.13
LDHB-210ENST00000544151 SPATA31A5Q5VU36 1347 aa22.11■■□□□ 1.13
LDHB-210ENST00000544151 SPATA31A7Q8IWB4 1347 aa22.11■■□□□ 1.13
LDHB-210ENST00000544151 GCP02774 474 aa22.11■■□□□ 1.13
LDHB-210ENST00000544151 NLRP6P59044 892 aa22.11■■□□□ 1.13
LDHB-210ENST00000544151 ZNF692Q9BU19 519 aaPredicted RBP22.11■■□□□ 1.13
LDHB-210ENST00000544151 USP54Q70EL1 1684 aa22.11■■□□□ 1.13
LDHB-210ENST00000544151 TTC21BQ7Z4L5 1316 aa22.1■■□□□ 1.13
LDHB-210ENST00000544151 CLSPNQ9HAW4 1339 aa22.1■■□□□ 1.13
LDHB-210ENST00000544151 CD163L1Q9NR16 1453 aa22.1■■□□□ 1.13
LDHB-210ENST00000544151 USP47Q96K76 1375 aa22.09■■□□□ 1.13
LDHB-210ENST00000544151 TTC21AQ8NDW8 1320 aa22.08■■□□□ 1.13
LDHB-210ENST00000544151 ST20-MTHFSA0A0A6YYL1 179 aa22.08■■□□□ 1.13
LDHB-210ENST00000544151 ZBTB7CA1YPR0 619 aa22.08■■□□□ 1.13
LDHB-210ENST00000544151 ONECUT3O60422 494 aaPredicted RBP22.08■■□□□ 1.13
LDHB-210ENST00000544151 TMC1Q8TDI8 760 aa22.08■■□□□ 1.13
LDHB-210ENST00000544151 COL5A2P05997 1499 aaPredicted RBP22.08■■□□□ 1.12
LDHB-210ENST00000544151 COL18A1P39060 1754 aa22.07■■□□□ 1.12
LDHB-210ENST00000544151 RGPD5Q99666 1765 aa22.07■■□□□ 1.12
LDHB-210ENST00000544151 KRT27Q7Z3Y8 459 aa22.06■■□□□ 1.12
LDHB-210ENST00000544151 TESK2Q96S53 571 aa22.06■■□□□ 1.12
LDHB-210ENST00000544151 SPATA31A1Q5TZJ5 1347 aa22.06■■□□□ 1.12
LDHB-210ENST00000544151 KCNA4P22459 653 aa22.05■■□□□ 1.12
LDHB-210ENST00000544151 NFAT5O94916 1531 aa22.05■■□□□ 1.12
LDHB-210ENST00000544151 BLMP54132 1417 aaPredicted RBP22.05■■□□□ 1.12
LDHB-210ENST00000544151 LTN1O94822 1766 aa22.04■■□□□ 1.12
LDHB-210ENST00000544151 WNK3Q9BYP7 1800 aa22.04■■□□□ 1.12
LDHB-210ENST00000544151 A0A1W2PP64 1363 aa22.04■■□□□ 1.12
LDHB-210ENST00000544151 EVA1CP58658 441 aa22.04■■□□□ 1.12
LDHB-210ENST00000544151 USP35Q9P2H5 1018 aa22.04■■□□□ 1.12
LDHB-210ENST00000544151 HDGFL2Q7Z4V5 671 aaPredicted RBP22.03■■□□□ 1.12
LDHB-210ENST00000544151 RGPD1P0DJD0 1748 aa22.03■■□□□ 1.12
LDHB-210ENST00000544151 SOX12O15370 315 aa22.02■■□□□ 1.12
LDHB-210ENST00000544151 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.02■■□□□ 1.12
LDHB-210ENST00000544151 SLC12A5Q9H2X9 1139 aa22.02■■□□□ 1.12
LDHB-210ENST00000544151 EDC4Q6P2E9 1401 aaKnown RBP22.02■■□□□ 1.12
LDHB-210ENST00000544151 NINLQ9Y2I6 1382 aa22.01■■□□□ 1.11
LDHB-210ENST00000544151 PARP4Q9UKK3 1724 aaKnown RBP22.01■■□□□ 1.11
LDHB-210ENST00000544151 LARP1Q6PKG0 1096 aaKnown RBP22.01■■□□□ 1.11
LDHB-210ENST00000544151 TIMELESSQ9UNS1 1208 aa22.01■■□□□ 1.11
LDHB-210ENST00000544151 AATKQ6ZMQ8 1374 aa22■■□□□ 1.11
LDHB-210ENST00000544151 CCDC125Q86Z20 511 aa22■■□□□ 1.11
LDHB-210ENST00000544151 KCNH5Q8NCM2 988 aa22■■□□□ 1.11
LDHB-210ENST00000544151 PUS7Q96PZ0 661 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms