RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 PRR14Q9BWN1 585 aa6.75□□□□□ -1.33
SCFD1-207ENST00000544052 PRKD2Q9BZL6 878 aa6.75□□□□□ -1.33
SCFD1-207ENST00000544052 PCDHB3Q9Y5E6 796 aa6.75□□□□□ -1.33
SCFD1-207ENST00000544052 THAP11Q96EK4 314 aa6.74□□□□□ -1.33
SCFD1-207ENST00000544052 UCN2Q96RP3 112 aa6.74□□□□□ -1.33
SCFD1-207ENST00000544052 PPP1R12CQ9BZL4 782 aa6.74□□□□□ -1.33
SCFD1-207ENST00000544052 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.74□□□□□ -1.33
SCFD1-207ENST00000544052 GFRA3O60609 400 aa6.73□□□□□ -1.33
SCFD1-207ENST00000544052 MAP10Q9P2G4 905 aa6.73□□□□□ -1.33
SCFD1-207ENST00000544052 PALM3A6NDB9 673 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-207ENST00000544052 PPP1R15AO75807 674 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-207ENST00000544052 TRAIPQ9BWF2 469 aa6.73□□□□□ -1.33
SCFD1-207ENST00000544052 SALL2Q9Y467 1007 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-207ENST00000544052 V9GY48 417 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-207ENST00000544052 GGCXP38435 758 aa6.72□□□□□ -1.33
SCFD1-207ENST00000544052 ACIN1Q9UKV3 1341 aaKnown RBP6.72□□□□□ -1.33
SCFD1-207ENST00000544052 ZBTB7CA1YPR0 619 aa6.72□□□□□ -1.33
SCFD1-207ENST00000544052 FMNL1O95466 1100 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-207ENST00000544052 AEBP1Q8IUX7 1158 aa6.72□□□□□ -1.33
SCFD1-207ENST00000544052 TFIP11Q9UBB9 837 aaKnown RBP6.72□□□□□ -1.33
SCFD1-207ENST00000544052 F12P00748 615 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-207ENST00000544052 FBXO45P0C2W1 286 aa6.71□□□□□ -1.34
SCFD1-207ENST00000544052 LMOD1P29536 600 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-207ENST00000544052 COPS2P61201 443 aa6.71□□□□□ -1.34
SCFD1-207ENST00000544052 SRPK2P78362 688 aaKnown RBP6.71□□□□□ -1.34
SCFD1-207ENST00000544052 SEMA3FQ13275 785 aa6.71□□□□□ -1.34
SCFD1-207ENST00000544052 PBXIP1Q96AQ6 731 aa6.71□□□□□ -1.34
SCFD1-207ENST00000544052 CARNS1A5YM72 827 aa6.7□□□□□ -1.34
SCFD1-207ENST00000544052 NR1I2O75469 434 aa6.7□□□□□ -1.34
SCFD1-207ENST00000544052 NKX2-3Q8TAU0 364 aa6.7□□□□□ -1.34
SCFD1-207ENST00000544052 FKBPLQ9UIM3 349 aa6.7□□□□□ -1.34
SCFD1-207ENST00000544052 NRG2O14511 850 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-207ENST00000544052 JUNDP17535 347 aa6.7□□□□□ -1.34
SCFD1-207ENST00000544052 CTHP32929 405 aa6.69□□□□□ -1.34
SCFD1-207ENST00000544052 CDCA8Q53HL2 280 aa6.69□□□□□ -1.34
SCFD1-207ENST00000544052 TBC1D9Q6ZT07 1266 aa6.69□□□□□ -1.34
SCFD1-207ENST00000544052 FAM160A2Q8N612 972 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-207ENST00000544052 PRDM9Q9NQV7 894 aa6.69□□□□□ -1.34
SCFD1-207ENST00000544052 ZPR1O75312 459 aa6.69□□□□□ -1.34
SCFD1-207ENST00000544052 PTPRNQ16849 979 aa6.69□□□□□ -1.34
SCFD1-207ENST00000544052 SPSB2Q99619 263 aa6.69□□□□□ -1.34
SCFD1-207ENST00000544052 ZBBXA8MT70 800 aa6.68□□□□□ -1.34
SCFD1-207ENST00000544052 SOX11P35716 441 aa6.68□□□□□ -1.34
SCFD1-207ENST00000544052 EIF4G2P78344 907 aaKnown RBP eCLIP6.68□□□□□ -1.34
SCFD1-207ENST00000544052 NR1H3Q13133 447 aa6.68□□□□□ -1.34
SCFD1-207ENST00000544052 TRAF7Q6Q0C0 670 aa6.68□□□□□ -1.34
SCFD1-207ENST00000544052 PNMA1Q8ND90 353 aa6.68□□□□□ -1.34
SCFD1-207ENST00000544052 MAFBQ9Y5Q3 323 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-207ENST00000544052 PIK3CDO00329 1044 aa6.67□□□□□ -1.34
SCFD1-207ENST00000544052 TLL1O43897 1013 aa6.67□□□□□ -1.34
SCFD1-207ENST00000544052 NUDT12Q9BQG2 462 aa6.66□□□□□ -1.34
SCFD1-207ENST00000544052 EVA1BQ9NVM1 165 aa6.66□□□□□ -1.34
SCFD1-207ENST00000544052 DXOO77932 396 aaKnown RBP6.65□□□□□ -1.34
SCFD1-207ENST00000544052 CCNYL3P0C7X3 344 aa6.65□□□□□ -1.34
SCFD1-207ENST00000544052 MSS51Q4VC12 460 aa6.65□□□□□ -1.34
SCFD1-207ENST00000544052 KCTD17Q8N5Z5 321 aa6.65□□□□□ -1.34
SCFD1-207ENST00000544052 LCE2BO14633 110 aa6.65□□□□□ -1.35
SCFD1-207ENST00000544052 OCSTAMPQ9BR26 566 aa6.65□□□□□ -1.35
SCFD1-207ENST00000544052 PDZRN3Q9UPQ7 1066 aa6.64□□□□□ -1.35
SCFD1-207ENST00000544052 ATP9BO43861 1147 aa6.64□□□□□ -1.35
SCFD1-207ENST00000544052 MMP16P51512 607 aa6.64□□□□□ -1.35
SCFD1-207ENST00000544052 KCNH2Q12809 1159 aa6.64□□□□□ -1.35
SCFD1-207ENST00000544052 CSB-PGBD3P0DP91 1061 aa6.63□□□□□ -1.35
SCFD1-207ENST00000544052 PTCRAQ6ISU1 281 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-207ENST00000544052 FAM174AQ8TBP5 190 aa6.62□□□□□ -1.35
SCFD1-207ENST00000544052 RNF223E7ERA6 249 aa6.62□□□□□ -1.35
SCFD1-207ENST00000544052 DEPDC4Q8N2C3 294 aa6.62□□□□□ -1.35
SCFD1-207ENST00000544052 CCDC24Q8N4L8 307 aa6.62□□□□□ -1.35
SCFD1-207ENST00000544052 ZC3H4Q9UPT8 1303 aaKnown RBP6.62□□□□□ -1.35
SCFD1-207ENST00000544052 KANK4Q5T7N3 995 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-207ENST00000544052 PDXDC2PQ6P474 469 aa6.61□□□□□ -1.35
SCFD1-207ENST00000544052 ADH1BP00325 375 aa6.61□□□□□ -1.35
SCFD1-207ENST00000544052 SKIP12755 728 aa6.61□□□□□ -1.35
SCFD1-207ENST00000544052 SLC19A1P41440 591 aa6.61□□□□□ -1.35
SCFD1-207ENST00000544052 TMEM88BA6NKF7 163 aa6.6□□□□□ -1.35
SCFD1-207ENST00000544052 ATG7O95352 703 aa6.6□□□□□ -1.35
SCFD1-207ENST00000544052 PTK2Q05397 1052 aa6.6□□□□□ -1.35
SCFD1-207ENST00000544052 UNC93B1Q9H1C4 597 aa6.6□□□□□ -1.35
SCFD1-207ENST00000544052 VRTNQ9H8Y1 702 aa6.6□□□□□ -1.35
SCFD1-207ENST00000544052 CEP126Q9P2H0 1117 aa6.6□□□□□ -1.35
SCFD1-207ENST00000544052 USTQ9Y2C2 406 aa6.6□□□□□ -1.35
SCFD1-207ENST00000544052 USP17L3A6NCW0 530 aa6.59□□□□□ -1.35
SCFD1-207ENST00000544052 USP17L4A6NCW7 530 aa6.59□□□□□ -1.35
SCFD1-207ENST00000544052 USP17L2Q6R6M4 530 aa6.59□□□□□ -1.35
SCFD1-207ENST00000544052 USP17L1Q7RTZ2 530 aa6.59□□□□□ -1.35
SCFD1-207ENST00000544052 ANKLE1Q8NAG6 615 aa6.59□□□□□ -1.35
SCFD1-207ENST00000544052 ADAM32Q8TC27 787 aa6.59□□□□□ -1.35
SCFD1-207ENST00000544052 GZF1Q9H116 711 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-207ENST00000544052 CCDC9Q9Y3X0 531 aaKnown RBP6.59□□□□□ -1.35
SCFD1-207ENST00000544052 PCDHB9Q9Y5E1 797 aa6.59□□□□□ -1.35
SCFD1-207ENST00000544052 USP17L5A8MUK1 530 aa6.59□□□□□ -1.35
SCFD1-207ENST00000544052 PDE4CQ08493 712 aa6.59□□□□□ -1.35
SCFD1-207ENST00000544052 ARMC2Q8NEN0 867 aa6.59□□□□□ -1.35
SCFD1-207ENST00000544052 GPSM3Q9Y4H4 160 aa6.59□□□□□ -1.35
SCFD1-207ENST00000544052 NBPF14Q5TI25 921 aa6.58□□□□□ -1.36
SCFD1-207ENST00000544052 S1PR4O95977 384 aa6.57□□□□□ -1.36
SCFD1-207ENST00000544052 TSGA10IPQ3SY00 556 aa6.57□□□□□ -1.36
SCFD1-207ENST00000544052 GPKOWQ92917 476 aaPredicted RBP eCLIP6.57□□□□□ -1.36
SCFD1-207ENST00000544052 ARHGAP9Q9BRR9 750 aa6.57□□□□□ -1.36
SCFD1-207ENST00000544052 SLC6A16Q9GZN6 736 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms