RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 NUDT16Q96DE0 195 aaKnown RBP33.04■■■□□ 2.88
CDKN3-207ENST00000543789 BRWD3Q6RI45 1802 aa33.02■■■□□ 2.88
CDKN3-207ENST00000543789 ABCA3Q99758 1704 aa33.02■■■□□ 2.88
CDKN3-207ENST00000543789 TRPM3Q9HCF6 1732 aaPredicted RBP33■■■□□ 2.87
CDKN3-207ENST00000543789 PRDM11Q9NQV5 511 aa33■■■□□ 2.87
CDKN3-207ENST00000543789 SPATA31A5Q5VU36 1347 aa33■■■□□ 2.87
CDKN3-207ENST00000543789 SPATA31A7Q8IWB4 1347 aa33■■■□□ 2.87
CDKN3-207ENST00000543789 BAG6P46379 1132 aa32.98■■■□□ 2.87
CDKN3-207ENST00000543789 CDK19Q9BWU1 502 aa32.97■■■□□ 2.87
CDKN3-207ENST00000543789 ALS2Q96Q42 1657 aa32.96■■■□□ 2.87
CDKN3-207ENST00000543789 COL14A1Q05707 1796 aaKnown RBP32.93■■■□□ 2.86
CDKN3-207ENST00000543789 NRAPQ86VF7 1730 aa32.91■■■□□ 2.86
CDKN3-207ENST00000543789 CCDC61Q9Y6R9 512 aa32.91■■■□□ 2.86
CDKN3-207ENST00000543789 ATP7BP35670 1465 aa32.91■■■□□ 2.86
CDKN3-207ENST00000543789 CHRNA2Q15822 529 aa32.9■■■□□ 2.86
CDKN3-207ENST00000543789 NBPF8Q3BBV2 869 aa32.9■■■□□ 2.86
CDKN3-207ENST00000543789 FAM182BQ5T319 152 aa32.9■■■□□ 2.86
CDKN3-207ENST00000543789 KIAA0232Q92628 1395 aa32.9■■■□□ 2.86
CDKN3-207ENST00000543789 NUTM2GQ5VZR2 741 aa32.89■■■□□ 2.86
CDKN3-207ENST00000543789 ACEP12821 1306 aa32.88■■■□□ 2.85
CDKN3-207ENST00000543789 ZC3H6P61129 1189 aaKnown RBP32.88■■■□□ 2.85
CDKN3-207ENST00000543789 EN1Q05925 392 aaPredicted RBP32.87■■■□□ 2.85
CDKN3-207ENST00000543789 SPATA31A1Q5TZJ5 1347 aa32.86■■■□□ 2.85
CDKN3-207ENST00000543789 PLEKHG3A1L390 1219 aa32.86■■■□□ 2.85
CDKN3-207ENST00000543789 STRN4Q9NRL3 753 aa32.86■■■□□ 2.85
CDKN3-207ENST00000543789 POLR3AO14802 1390 aaPredicted RBP32.85■■■□□ 2.85
CDKN3-207ENST00000543789 PSDA5PKW4 1024 aaPredicted RBP32.84■■■□□ 2.85
CDKN3-207ENST00000543789 NBPF1Q3BBV0 1214 aa32.83■■■□□ 2.85
CDKN3-207ENST00000543789 EVA1CP58658 441 aa32.82■■■□□ 2.84
CDKN3-207ENST00000543789 ARHGEF28Q8N1W1 1705 aaKnown RBP32.82■■■□□ 2.84
CDKN3-207ENST00000543789 ABTB2Q8N961 1025 aa32.81■■■□□ 2.84
CDKN3-207ENST00000543789 FAM196AQ6ZSG2 479 aa32.78■■■□□ 2.84
CDKN3-207ENST00000543789 CRYBG1Q9Y4K1 1723 aa32.77■■■□□ 2.84
CDKN3-207ENST00000543789 USP35Q9P2H5 1018 aa32.77■■■□□ 2.84
CDKN3-207ENST00000543789 SRPK2P78362 688 aaKnown RBP32.76■■■□□ 2.83
CDKN3-207ENST00000543789 ITSN1Q15811 1721 aa32.76■■■□□ 2.83
CDKN3-207ENST00000543789 TRIM37O94972 964 aa32.74■■■□□ 2.83
CDKN3-207ENST00000543789 BARGINQ6ZT62 677 aa32.74■■■□□ 2.83
CDKN3-207ENST00000543789 THSD7AQ9UPZ6 1657 aa32.74■■■□□ 2.83
CDKN3-207ENST00000543789 DISP2A7MBM2 1401 aa32.73■■■□□ 2.83
CDKN3-207ENST00000543789 EZH2Q15910 746 aaKnown RBP32.72■■■□□ 2.83
CDKN3-207ENST00000543789 NLRP13Q86W25 1043 aa32.72■■■□□ 2.83
CDKN3-207ENST00000543789 CENPJQ9HC77 1338 aaPredicted RBP32.72■■■□□ 2.83
CDKN3-207ENST00000543789 PDE3BQ13370 1112 aa32.71■■■□□ 2.83
CDKN3-207ENST00000543789 R3HDM1Q15032 1099 aaKnown RBP32.71■■■□□ 2.83
CDKN3-207ENST00000543789 LARP1Q6PKG0 1096 aaKnown RBP32.71■■■□□ 2.83
CDKN3-207ENST00000543789 CABP2Q9NPB3 220 aa32.71■■■□□ 2.83
CDKN3-207ENST00000543789 SSH2Q76I76 1423 aa32.7■■■□□ 2.83
CDKN3-207ENST00000543789 USP19O94966 1318 aa32.7■■■□□ 2.82
CDKN3-207ENST00000543789 CPDO75976 1380 aa32.7■■■□□ 2.82
CDKN3-207ENST00000543789 GCP02774 474 aa32.69■■■□□ 2.82
CDKN3-207ENST00000543789 TCP11L2Q8N4U5 519 aa32.69■■■□□ 2.82
CDKN3-207ENST00000543789 CAMKK2Q96RR4 588 aa32.69■■■□□ 2.82
CDKN3-207ENST00000543789 PPIP5K1Q6PFW1 1433 aa32.68■■■□□ 2.82
CDKN3-207ENST00000543789 APBA3O96018 575 aa32.67■■■□□ 2.82
CDKN3-207ENST00000543789 PHRF1Q9P1Y6 1649 aaKnown RBP32.66■■■□□ 2.82
CDKN3-207ENST00000543789 KIAA1210Q9ULL0 1709 aa32.66■■■□□ 2.82
CDKN3-207ENST00000543789 LRP5O75197 1615 aa32.66■■■□□ 2.82
CDKN3-207ENST00000543789 RGPD1P0DJD0 1748 aa32.65■■■□□ 2.82
CDKN3-207ENST00000543789 TOPAZ1Q8N9V7 1692 aa32.64■■■□□ 2.82
CDKN3-207ENST00000543789 THRAP3Q9Y2W1 955 aaKnown RBP32.64■■■□□ 2.82
CDKN3-207ENST00000543789 CAMTA1Q9Y6Y1 1673 aa32.64■■■□□ 2.82
CDKN3-207ENST00000543789 BRD4O60885 1362 aaPredicted RBP32.63■■■□□ 2.81
CDKN3-207ENST00000543789 CABP1Q9NZU7 370 aa32.63■■■□□ 2.81
CDKN3-207ENST00000543789 PARD3Q8TEW0 1356 aa32.59■■■□□ 2.81
CDKN3-207ENST00000543789 NRKQ7Z2Y5 1582 aa32.59■■■□□ 2.81
CDKN3-207ENST00000543789 NLRP6P59044 892 aa32.58■■■□□ 2.81
CDKN3-207ENST00000543789 L3MBTL2Q969R5 705 aa32.58■■■□□ 2.81
CDKN3-207ENST00000543789 ZBTB7CA1YPR0 619 aa32.55■■■□□ 2.8
CDKN3-207ENST00000543789 TNS1Q9HBL0 1735 aaKnown RBP32.54■■■□□ 2.8
CDKN3-207ENST00000543789 USP6P35125 1406 aa32.52■■■□□ 2.8
CDKN3-207ENST00000543789 COL5A2P05997 1499 aaPredicted RBP32.52■■■□□ 2.8
CDKN3-207ENST00000543789 EVC2Q86UK5 1308 aa32.51■■■□□ 2.8
CDKN3-207ENST00000543789 LMO7Q8WWI1 1683 aa32.51■■■□□ 2.79
CDKN3-207ENST00000543789 C11orf95C9JLR9 678 aaPredicted RBP32.51■■■□□ 2.79
CDKN3-207ENST00000543789 AATKQ6ZMQ8 1374 aa32.5■■■□□ 2.79
CDKN3-207ENST00000543789 NBPF14Q5TI25 921 aa32.5■■■□□ 2.79
CDKN3-207ENST00000543789 CRB1P82279 1406 aa32.49■■■□□ 2.79
CDKN3-207ENST00000543789 TOM1L2Q6ZVM7 507 aa32.46■■■□□ 2.79
CDKN3-207ENST00000543789 SIN3AQ96ST3 1273 aa32.46■■■□□ 2.79
CDKN3-207ENST00000543789 ZNF692Q9BU19 519 aaPredicted RBP32.46■■■□□ 2.79
CDKN3-207ENST00000543789 DDB1Q16531 1140 aa32.42■■■□□ 2.78
CDKN3-207ENST00000543789 AXIN2Q9Y2T1 843 aa32.42■■■□□ 2.78
CDKN3-207ENST00000543789 NEUROD1Q13562 356 aa32.41■■■□□ 2.78
CDKN3-207ENST00000543789 TTC21BQ7Z4L5 1316 aa32.41■■■□□ 2.78
CDKN3-207ENST00000543789 SLIT3O75094 1523 aa32.41■■■□□ 2.78
CDKN3-207ENST00000543789 QRICH2Q9H0J4 1663 aa32.4■■■□□ 2.78
CDKN3-207ENST00000543789 KCNH5Q8NCM2 988 aa32.4■■■□□ 2.78
CDKN3-207ENST00000543789 ROCK2O75116 1388 aaKnown RBP32.4■■■□□ 2.78
CDKN3-207ENST00000543789 ARHGEF25Q86VW2 580 aa32.39■■■□□ 2.78
CDKN3-207ENST00000543789 WDR17Q8IZU2 1322 aa32.38■■■□□ 2.77
CDKN3-207ENST00000543789 OVOS2A0A0G2JMS6 1433 aa32.37■■■□□ 2.77
CDKN3-207ENST00000543789 OVOS2A0A0J9YW53 1432 aa32.37■■■□□ 2.77
CDKN3-207ENST00000543789 OVOS2Q6IE36 1432 aa32.37■■■□□ 2.77
CDKN3-207ENST00000543789 CDCA7Q9BWT1 371 aaPredicted RBP32.36■■■□□ 2.77
CDKN3-207ENST00000543789 PLSCR1O15162 318 aa32.35■■■□□ 2.77
CDKN3-207ENST00000543789 TTC21AQ8NDW8 1320 aa32.34■■■□□ 2.77
CDKN3-207ENST00000543789 SOX12O15370 315 aa32.34■■■□□ 2.77
CDKN3-207ENST00000543789 CSB-PGBD3P0DP91 1061 aa32.33■■■□□ 2.77
CDKN3-207ENST00000543789 BCL11BQ9C0K0 894 aaPredicted RBP32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms