RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 HAP1P54257 671 aaPredicted RBP22.96■■□□□ 1.27
CIT-212ENST00000543239 SLC24A1O60721 1099 aa22.95■■□□□ 1.26
CIT-212ENST00000543239 USP47Q96K76 1375 aa22.94■■□□□ 1.26
CIT-212ENST00000543239 ST20-MTHFSA0A0A6YYL1 179 aa22.94■■□□□ 1.26
CIT-212ENST00000543239 CABLES1Q8TDN4 633 aa22.94■■□□□ 1.26
CIT-212ENST00000543239 CRYBG1Q9Y4K1 1723 aa22.94■■□□□ 1.26
CIT-212ENST00000543239 USP6P35125 1406 aa22.93■■□□□ 1.26
CIT-212ENST00000543239 TESK2Q96S53 571 aa22.93■■□□□ 1.26
CIT-212ENST00000543239 USP21Q9UK80 565 aa22.93■■□□□ 1.26
CIT-212ENST00000543239 PUS7Q96PZ0 661 aaKnown RBP22.92■■□□□ 1.26
CIT-212ENST00000543239 SLIT2O94813 1529 aa22.91■■□□□ 1.26
CIT-212ENST00000543239 RXRBP28702 533 aa22.9■■□□□ 1.26
CIT-212ENST00000543239 QTRT2Q9H974 415 aaKnown RBP22.9■■□□□ 1.26
CIT-212ENST00000543239 BCL9LQ86UU0 1499 aa22.9■■□□□ 1.26
CIT-212ENST00000543239 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.89■■□□□ 1.26
CIT-212ENST00000543239 ZNF692Q9BU19 519 aaPredicted RBP22.89■■□□□ 1.25
CIT-212ENST00000543239 CDK12Q9NYV4 1490 aaPredicted RBP22.89■■□□□ 1.25
CIT-212ENST00000543239 PLEKHG5O94827 1062 aa22.88■■□□□ 1.25
CIT-212ENST00000543239 TRPC5Q9UL62 973 aaPredicted RBP22.88■■□□□ 1.25
CIT-212ENST00000543239 ATRNO75882 1429 aa22.88■■□□□ 1.25
CIT-212ENST00000543239 CPSF1Q10570 1443 aaKnown RBP22.88■■□□□ 1.25
CIT-212ENST00000543239 SSH2Q76I76 1423 aa22.88■■□□□ 1.25
CIT-212ENST00000543239 AKAP12Q02952 1782 aa22.88■■□□□ 1.25
CIT-212ENST00000543239 PHRF1Q9P1Y6 1649 aaKnown RBP22.87■■□□□ 1.25
CIT-212ENST00000543239 RBM6P78332 1123 aaKnown RBP22.87■■□□□ 1.25
CIT-212ENST00000543239 ABTB2Q8N961 1025 aa22.87■■□□□ 1.25
CIT-212ENST00000543239 PLCH1Q4KWH8 1693 aa22.86■■□□□ 1.25
CIT-212ENST00000543239 NWD2Q9ULI1 1742 aa22.85■■□□□ 1.25
CIT-212ENST00000543239 USP19O94966 1318 aa22.84■■□□□ 1.25
CIT-212ENST00000543239 NLRP13Q86W25 1043 aa22.84■■□□□ 1.25
CIT-212ENST00000543239 UNC5CLQ8IV45 518 aa22.84■■□□□ 1.25
CIT-212ENST00000543239 NRKQ7Z2Y5 1582 aa22.84■■□□□ 1.25
CIT-212ENST00000543239 COL14A1Q05707 1796 aaKnown RBP22.84■■□□□ 1.25
CIT-212ENST00000543239 NUTM2GQ5VZR2 741 aa22.83■■□□□ 1.25
CIT-212ENST00000543239 NINLQ9Y2I6 1382 aa22.83■■□□□ 1.25
CIT-212ENST00000543239 MON2Q7Z3U7 1717 aa22.82■■□□□ 1.24
CIT-212ENST00000543239 CD163L1Q9NR16 1453 aa22.82■■□□□ 1.24
CIT-212ENST00000543239 KTN1Q86UP2 1357 aaKnown RBP22.82■■□□□ 1.24
CIT-212ENST00000543239 FAM83GA6ND36 823 aa22.82■■□□□ 1.24
CIT-212ENST00000543239 TMF1P82094 1093 aa22.82■■□□□ 1.24
CIT-212ENST00000543239 TTC21AQ8NDW8 1320 aa22.82■■□□□ 1.24
CIT-212ENST00000543239 TTC21BQ7Z4L5 1316 aa22.81■■□□□ 1.24
CIT-212ENST00000543239 PIK3C2AO00443 1686 aa22.81■■□□□ 1.24
CIT-212ENST00000543239 TMC1Q8TDI8 760 aa22.8■■□□□ 1.24
CIT-212ENST00000543239 HDGFL2Q7Z4V5 671 aaPredicted RBP22.79■■□□□ 1.24
CIT-212ENST00000543239 PRDM11Q9NQV5 511 aa22.79■■□□□ 1.24
CIT-212ENST00000543239 RGS12O14924 1447 aa22.79■■□□□ 1.24
CIT-212ENST00000543239 KIAA0232Q92628 1395 aa22.78■■□□□ 1.24
CIT-212ENST00000543239 NLRP6P59044 892 aa22.78■■□□□ 1.24
CIT-212ENST00000543239 SLC12A5Q9H2X9 1139 aa22.78■■□□□ 1.24
CIT-212ENST00000543239 TERF2IPQ9NYB0 399 aa22.78■■□□□ 1.24
CIT-212ENST00000543239 SLIT3O75094 1523 aa22.77■■□□□ 1.24
CIT-212ENST00000543239 NRAPQ86VF7 1730 aa22.77■■□□□ 1.24
CIT-212ENST00000543239 CDCA8Q53HL2 280 aa22.77■■□□□ 1.24
CIT-212ENST00000543239 GJD4Q96KN9 370 aaPredicted RBP22.77■■□□□ 1.24
CIT-212ENST00000543239 CPDO75976 1380 aa22.76■■□□□ 1.23
CIT-212ENST00000543239 VPS72Q15906 364 aa22.76■■□□□ 1.23
CIT-212ENST00000543239 A0A1W2PP64 1363 aa22.76■■□□□ 1.23
CIT-212ENST00000543239 EDC4Q6P2E9 1401 aaKnown RBP22.75■■□□□ 1.23
CIT-212ENST00000543239 GCP02774 474 aa22.75■■□□□ 1.23
CIT-212ENST00000543239 BTG4Q9NY30 223 aa22.75■■□□□ 1.23
CIT-212ENST00000543239 ZC3H6P61129 1189 aaKnown RBP22.74■■□□□ 1.23
CIT-212ENST00000543239 GLI3P10071 1580 aa22.74■■□□□ 1.23
CIT-212ENST00000543239 EIF4G2P78344 907 aaKnown RBP eCLIP22.73■■□□□ 1.23
CIT-212ENST00000543239 USP54Q70EL1 1684 aa22.71■■□□□ 1.23
CIT-212ENST00000543239 USP31Q70CQ4 1352 aa22.71■■□□□ 1.23
CIT-212ENST00000543239 CHRNA2Q15822 529 aa22.7■■□□□ 1.22
CIT-212ENST00000543239 ANKRD36BQ8N2N9 1353 aa22.7■■□□□ 1.22
CIT-212ENST00000543239 LMO7Q8WWI1 1683 aa22.7■■□□□ 1.22
CIT-212ENST00000543239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.69■■□□□ 1.22
CIT-212ENST00000543239 KCNH5Q8NCM2 988 aa22.69■■□□□ 1.22
CIT-212ENST00000543239 CCDC9Q9Y3X0 531 aaKnown RBP22.68■■□□□ 1.22
CIT-212ENST00000543239 HSPA5P11021 654 aaKnown RBP22.67■■□□□ 1.22
CIT-212ENST00000543239 NME9Q86XW9 330 aa22.66■■□□□ 1.22
CIT-212ENST00000543239 AATKQ6ZMQ8 1374 aa22.65■■□□□ 1.22
CIT-212ENST00000543239 CAMTA1Q9Y6Y1 1673 aa22.65■■□□□ 1.22
CIT-212ENST00000543239 NFAT5O94916 1531 aa22.65■■□□□ 1.22
CIT-212ENST00000543239 MYOM1P52179 1685 aa22.65■■□□□ 1.22
CIT-212ENST00000543239 SPATA31A5Q5VU36 1347 aa22.64■■□□□ 1.22
CIT-212ENST00000543239 SPATA31A7Q8IWB4 1347 aa22.64■■□□□ 1.22
CIT-212ENST00000543239 ONECUT3O60422 494 aaPredicted RBP22.64■■□□□ 1.21
CIT-212ENST00000543239 OVOS2A0A0J9YW53 1432 aa22.63■■□□□ 1.21
CIT-212ENST00000543239 OVOS2Q6IE36 1432 aa22.63■■□□□ 1.21
CIT-212ENST00000543239 ARHGEF25Q86VW2 580 aa22.62■■□□□ 1.21
CIT-212ENST00000543239 STRN4Q9NRL3 753 aa22.62■■□□□ 1.21
CIT-212ENST00000543239 ZRANB1Q9UGI0 708 aa22.62■■□□□ 1.21
CIT-212ENST00000543239 ABCC6O95255 1503 aa22.62■■□□□ 1.21
CIT-212ENST00000543239 COL5A2P05997 1499 aaPredicted RBP22.61■■□□□ 1.21
CIT-212ENST00000543239 COL18A1P39060 1754 aa22.61■■□□□ 1.21
CIT-212ENST00000543239 EVA1CP58658 441 aa22.6■■□□□ 1.21
CIT-212ENST00000543239 SPATA31A1Q5TZJ5 1347 aa22.59■■□□□ 1.21
CIT-212ENST00000543239 ZBTB7CA1YPR0 619 aa22.59■■□□□ 1.21
CIT-212ENST00000543239 SEPT12Q8IYM1 358 aa22.59■■□□□ 1.21
CIT-212ENST00000543239 SOX12O15370 315 aa22.58■■□□□ 1.21
CIT-212ENST00000543239 UPF1Q92900 1129 aaKnown RBP eCLIP22.58■■□□□ 1.21
CIT-212ENST00000543239 FAM98CQ17RN3 349 aaKnown RBP22.57■■□□□ 1.2
CIT-212ENST00000543239 THSD7AQ9UPZ6 1657 aa22.56■■□□□ 1.2
CIT-212ENST00000543239 COG3Q96JB2 828 aa22.56■■□□□ 1.2
CIT-212ENST00000543239 LARP1Q6PKG0 1096 aaKnown RBP22.55■■□□□ 1.2
CIT-212ENST00000543239 CRB1P82279 1406 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms