RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 NRAPQ86VF7 1730 aa17.44■□□□□ 0.38
PTPN6-220ENST00000543115 POLR3AO14802 1390 aaPredicted RBP17.44■□□□□ 0.38
PTPN6-220ENST00000543115 SEPT12Q8IYM1 358 aa17.44■□□□□ 0.38
PTPN6-220ENST00000543115 BTG4Q9NY30 223 aa17.44■□□□□ 0.38
PTPN6-220ENST00000543115 CCDC61Q9Y6R9 512 aa17.44■□□□□ 0.38
PTPN6-220ENST00000543115 ACEP12821 1306 aa17.44■□□□□ 0.38
PTPN6-220ENST00000543115 ONECUT3O60422 494 aaPredicted RBP17.43■□□□□ 0.38
PTPN6-220ENST00000543115 COL14A1Q05707 1796 aaKnown RBP17.42■□□□□ 0.38
PTPN6-220ENST00000543115 CENPJQ9HC77 1338 aaPredicted RBP17.42■□□□□ 0.38
PTPN6-220ENST00000543115 PLEKHG3A1L390 1219 aa17.41■□□□□ 0.38
PTPN6-220ENST00000543115 NBPF8Q3BBV2 869 aa17.41■□□□□ 0.38
PTPN6-220ENST00000543115 NUTM2GQ5VZR2 741 aa17.41■□□□□ 0.38
PTPN6-220ENST00000543115 BRWD3Q6RI45 1802 aa17.41■□□□□ 0.38
PTPN6-220ENST00000543115 CABP2Q9NPB3 220 aa17.4■□□□□ 0.38
PTPN6-220ENST00000543115 EP400Q96L91 3159 aa17.4■□□□□ 0.38
PTPN6-220ENST00000543115 SRPK2P78362 688 aaKnown RBP17.39■□□□□ 0.37
PTPN6-220ENST00000543115 NEUROD1Q13562 356 aa17.39■□□□□ 0.37
PTPN6-220ENST00000543115 CCDC125Q86Z20 511 aa17.39■□□□□ 0.37
PTPN6-220ENST00000543115 PHRF1Q9P1Y6 1649 aaKnown RBP17.39■□□□□ 0.37
PTPN6-220ENST00000543115 KIAA0232Q92628 1395 aa17.39■□□□□ 0.37
PTPN6-220ENST00000543115 FAM98CQ17RN3 349 aaKnown RBP17.38■□□□□ 0.37
PTPN6-220ENST00000543115 PRDM11Q9NQV5 511 aa17.38■□□□□ 0.37
PTPN6-220ENST00000543115 BLMP54132 1417 aaPredicted RBP17.38■□□□□ 0.37
PTPN6-220ENST00000543115 PPIP5K1Q6PFW1 1433 aa17.38■□□□□ 0.37
PTPN6-220ENST00000543115 TRPM1Q7Z4N2 1603 aa17.37■□□□□ 0.37
PTPN6-220ENST00000543115 QRICH2Q9H0J4 1663 aa17.37■□□□□ 0.37
PTPN6-220ENST00000543115 CHRNA2Q15822 529 aa17.37■□□□□ 0.37
PTPN6-220ENST00000543115 KRT27Q7Z3Y8 459 aa17.37■□□□□ 0.37
PTPN6-220ENST00000543115 A0A0G2JS52 829 aa17.36■□□□□ 0.37
PTPN6-220ENST00000543115 ZC3H6P61129 1189 aaKnown RBP17.36■□□□□ 0.37
PTPN6-220ENST00000543115 MYT1Q01538 1121 aa17.36■□□□□ 0.37
PTPN6-220ENST00000543115 SPATA31A5Q5VU36 1347 aa17.36■□□□□ 0.37
PTPN6-220ENST00000543115 SPATA31A7Q8IWB4 1347 aa17.36■□□□□ 0.37
PTPN6-220ENST00000543115 NRKQ7Z2Y5 1582 aa17.34■□□□□ 0.37
PTPN6-220ENST00000543115 DEFB132Q7Z7B7 95 aa17.34■□□□□ 0.37
PTPN6-220ENST00000543115 ABTB2Q8N961 1025 aa17.34■□□□□ 0.37
PTPN6-220ENST00000543115 ROCK2O75116 1388 aaKnown RBP17.33■□□□□ 0.36
PTPN6-220ENST00000543115 USP19O94966 1318 aa17.33■□□□□ 0.36
PTPN6-220ENST00000543115 STRN4Q9NRL3 753 aa17.32■□□□□ 0.36
PTPN6-220ENST00000543115 CABP1Q9NZU7 370 aa17.32■□□□□ 0.36
PTPN6-220ENST00000543115 SPATA31A1Q5TZJ5 1347 aa17.31■□□□□ 0.36
PTPN6-220ENST00000543115 FAM182BQ5T319 152 aa17.31■□□□□ 0.36
PTPN6-220ENST00000543115 ZRANB1Q9UGI0 708 aa17.31■□□□□ 0.36
PTPN6-220ENST00000543115 THSD7AQ9UPZ6 1657 aa17.31■□□□□ 0.36
PTPN6-220ENST00000543115 USP6P35125 1406 aa17.3■□□□□ 0.36
PTPN6-220ENST00000543115 CAMTA1Q9Y6Y1 1673 aa17.29■□□□□ 0.36
PTPN6-220ENST00000543115 CPDO75976 1380 aa17.28■□□□□ 0.36
PTPN6-220ENST00000543115 EVC2Q86UK5 1308 aa17.28■□□□□ 0.36
PTPN6-220ENST00000543115 GCP02774 474 aa17.28■□□□□ 0.36
PTPN6-220ENST00000543115 SF3B2Q13435 895 aaKnown RBP17.28■□□□□ 0.36
PTPN6-220ENST00000543115 NLRP13Q86W25 1043 aa17.28■□□□□ 0.36
PTPN6-220ENST00000543115 LMO7Q8WWI1 1683 aa17.28■□□□□ 0.36
PTPN6-220ENST00000543115 SSH2Q76I76 1423 aa17.28■□□□□ 0.36
PTPN6-220ENST00000543115 BRD4O60885 1362 aaPredicted RBP17.28■□□□□ 0.36
PTPN6-220ENST00000543115 USP35Q9P2H5 1018 aa17.26■□□□□ 0.35
PTPN6-220ENST00000543115 EVA1CP58658 441 aa17.25■□□□□ 0.35
PTPN6-220ENST00000543115 LARP1Q6PKG0 1096 aaKnown RBP17.25■□□□□ 0.35
PTPN6-220ENST00000543115 NLRP6P59044 892 aa17.24■□□□□ 0.35
PTPN6-220ENST00000543115 SLIT3O75094 1523 aa17.24■□□□□ 0.35
PTPN6-220ENST00000543115 PIK3C2AO00443 1686 aa17.23■□□□□ 0.35
PTPN6-220ENST00000543115 COL5A2P05997 1499 aaPredicted RBP17.23■□□□□ 0.35
PTPN6-220ENST00000543115 BAG6P46379 1132 aa17.22■□□□□ 0.35
PTPN6-220ENST00000543115 BARGINQ6ZT62 677 aa17.22■□□□□ 0.35
PTPN6-220ENST00000543115 ZBTB7CA1YPR0 619 aa17.21■□□□□ 0.35
PTPN6-220ENST00000543115 CARD11Q9BXL7 1154 aa17.21■□□□□ 0.35
PTPN6-220ENST00000543115 CPSF1Q10570 1443 aaKnown RBP17.21■□□□□ 0.34
PTPN6-220ENST00000543115 TTC21BQ7Z4L5 1316 aa17.21■□□□□ 0.34
PTPN6-220ENST00000543115 TONSLQ96HA7 1378 aa17.2■□□□□ 0.34
PTPN6-220ENST00000543115 EN1Q05925 392 aaPredicted RBP17.2■□□□□ 0.34
PTPN6-220ENST00000543115 TCP11L2Q8N4U5 519 aa17.2■□□□□ 0.34
PTPN6-220ENST00000543115 RGPD1P0DJD0 1748 aa17.19■□□□□ 0.34
PTPN6-220ENST00000543115 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
PTPN6-220ENST00000543115 ZNF692Q9BU19 519 aaPredicted RBP17.19■□□□□ 0.34
PTPN6-220ENST00000543115 TNS1Q9HBL0 1735 aaKnown RBP17.18■□□□□ 0.34
PTPN6-220ENST00000543115 AATKQ6ZMQ8 1374 aa17.18■□□□□ 0.34
PTPN6-220ENST00000543115 AKAP12Q02952 1782 aa17.18■□□□□ 0.34
PTPN6-220ENST00000543115 DISP2A7MBM2 1401 aa17.17■□□□□ 0.34
PTPN6-220ENST00000543115 TRIM37O94972 964 aa17.17■□□□□ 0.34
PTPN6-220ENST00000543115 CRB1P82279 1406 aa17.17■□□□□ 0.34
PTPN6-220ENST00000543115 KTN1Q86UP2 1357 aaKnown RBP17.16■□□□□ 0.34
PTPN6-220ENST00000543115 FAM196AQ6ZSG2 479 aa17.16■□□□□ 0.34
PTPN6-220ENST00000543115 AXIN2Q9Y2T1 843 aa17.16■□□□□ 0.34
PTPN6-220ENST00000543115 THRAP3Q9Y2W1 955 aaKnown RBP17.16■□□□□ 0.34
PTPN6-220ENST00000543115 TTC21AQ8NDW8 1320 aa17.16■□□□□ 0.34
PTPN6-220ENST00000543115 SRCAPQ6ZRS2 3230 aa17.15■□□□□ 0.34
PTPN6-220ENST00000543115 COL18A1P39060 1754 aa17.15■□□□□ 0.34
PTPN6-220ENST00000543115 PSDA5PKW4 1024 aaPredicted RBP17.15■□□□□ 0.34
PTPN6-220ENST00000543115 SOX12O15370 315 aa17.15■□□□□ 0.34
PTPN6-220ENST00000543115 PDE3BQ13370 1112 aa17.15■□□□□ 0.34
PTPN6-220ENST00000543115 ARHGEF25Q86VW2 580 aa17.15■□□□□ 0.34
PTPN6-220ENST00000543115 CD163L1Q9NR16 1453 aa17.15■□□□□ 0.34
PTPN6-220ENST00000543115 TRIM26Q12899 539 aaPredicted RBP17.14■□□□□ 0.33
PTPN6-220ENST00000543115 EZH2Q15910 746 aaKnown RBP17.14■□□□□ 0.33
PTPN6-220ENST00000543115 MON2Q7Z3U7 1717 aa17.13■□□□□ 0.33
PTPN6-220ENST00000543115 PARP4Q9UKK3 1724 aaKnown RBP17.13■□□□□ 0.33
PTPN6-220ENST00000543115 NFAT5O94916 1531 aa17.12■□□□□ 0.33
PTPN6-220ENST00000543115 TOM1L2Q6ZVM7 507 aa17.12■□□□□ 0.33
PTPN6-220ENST00000543115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.12■□□□□ 0.33
PTPN6-220ENST00000543115 KCNH5Q8NCM2 988 aa17.12■□□□□ 0.33
PTPN6-220ENST00000543115 CAMKK2Q96RR4 588 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms