RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 DDX49Q9Y6V7 483 aaKnown RBP12.11□□□□□ -0.47
TCF4-208ENST00000543082 REREQ9P2R6 1566 aa12.1□□□□□ -0.47
TCF4-208ENST00000543082 ABCA6Q8N139 1617 aa12.1□□□□□ -0.47
TCF4-208ENST00000543082 CSPP1Q1MSJ5 1256 aa12.1□□□□□ -0.47
TCF4-208ENST00000543082 NOL7Q9UMY1 257 aaKnown RBP12.1□□□□□ -0.47
TCF4-208ENST00000543082 KIF16BQ96L93 1317 aa12.1□□□□□ -0.47
TCF4-208ENST00000543082 FAM13BQ9NYF5 915 aa12.1□□□□□ -0.47
TCF4-208ENST00000543082 ZNF518AQ6AHZ1 1483 aa12.09□□□□□ -0.47
TCF4-208ENST00000543082 DEPDC5O75140 1603 aa12.09□□□□□ -0.47
TCF4-208ENST00000543082 MAP3K4Q9Y6R4 1608 aa12.09□□□□□ -0.47
TCF4-208ENST00000543082 DYNC1I1O14576 645 aa12.09□□□□□ -0.47
TCF4-208ENST00000543082 AK9Q5TCS8 1911 aa12.09□□□□□ -0.47
TCF4-208ENST00000543082 TET3O43151 1660 aa12.09□□□□□ -0.47
TCF4-208ENST00000543082 SSFA2P28290 1259 aa12.08□□□□□ -0.47
TCF4-208ENST00000543082 MCM5P33992 734 aa12.08□□□□□ -0.47
TCF4-208ENST00000543082 UQCRHLA0A096LP55 91 aa12.08□□□□□ -0.48
TCF4-208ENST00000543082 BAG4O95429 457 aaKnown RBP12.08□□□□□ -0.48
TCF4-208ENST00000543082 UQCRHP07919 91 aa12.08□□□□□ -0.48
TCF4-208ENST00000543082 NUCB1Q02818 461 aa12.08□□□□□ -0.48
TCF4-208ENST00000543082 BMP2KLQ5H9B9 411 aa12.08□□□□□ -0.48
TCF4-208ENST00000543082 MORC1Q86VD1 984 aa12.08□□□□□ -0.48
TCF4-208ENST00000543082 ITPRIPQ8IWB1 547 aa12.08□□□□□ -0.48
TCF4-208ENST00000543082 PDLIM2Q96JY6 352 aa12.08□□□□□ -0.48
TCF4-208ENST00000543082 SMC4Q9NTJ3 1288 aa12.08□□□□□ -0.48
TCF4-208ENST00000543082 SBNO2Q9Y2G9 1366 aa12.08□□□□□ -0.48
TCF4-208ENST00000543082 ZC3H13Q5T200 1668 aaKnown RBP12.08□□□□□ -0.48
TCF4-208ENST00000543082 MYOM2P54296 1465 aa12.07□□□□□ -0.48
TCF4-208ENST00000543082 KIF2CQ99661 725 aa12.07□□□□□ -0.48
TCF4-208ENST00000543082 NSD3Q9BZ95 1437 aa12.07□□□□□ -0.48
TCF4-208ENST00000543082 CFAP53Q96M91 514 aa12.07□□□□□ -0.48
TCF4-208ENST00000543082 INO80Q9ULG1 1556 aaPredicted RBP12.06□□□□□ -0.48
TCF4-208ENST00000543082 PPRC1Q5VV67 1664 aaKnown RBP12.06□□□□□ -0.48
TCF4-208ENST00000543082 TRIM27P14373 513 aa12.06□□□□□ -0.48
TCF4-208ENST00000543082 ATF7IPQ6VMQ6 1270 aa12.06□□□□□ -0.48
TCF4-208ENST00000543082 IFT172Q9UG01 1749 aa12.06□□□□□ -0.48
TCF4-208ENST00000543082 ZKSCAN5Q9Y2L8 839 aa12.06□□□□□ -0.48
TCF4-208ENST00000543082 FBLN2P98095 1184 aa12.05□□□□□ -0.48
TCF4-208ENST00000543082 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
TCF4-208ENST00000543082 ABCC11Q96J66 1382 aa12.05□□□□□ -0.48
TCF4-208ENST00000543082 ABCC1P33527 1531 aa12.05□□□□□ -0.48
TCF4-208ENST00000543082 SASS6Q6UVJ0 657 aa12.05□□□□□ -0.48
TCF4-208ENST00000543082 CHD1LQ86WJ1 897 aa12.05□□□□□ -0.48
TCF4-208ENST00000543082 GAS2L2Q8NHY3 880 aa12.05□□□□□ -0.48
TCF4-208ENST00000543082 CD2BP2O95400 341 aaKnown RBP12.04□□□□□ -0.48
TCF4-208ENST00000543082 NUCB2P80303 420 aa12.04□□□□□ -0.48
TCF4-208ENST00000543082 ZSCAN23Q3MJ62 389 aa12.04□□□□□ -0.48
TCF4-208ENST00000543082 ZBTB40Q9NUA8 1239 aa12.04□□□□□ -0.48
TCF4-208ENST00000543082 KIF1BO60333 1816 aa12.04□□□□□ -0.48
TCF4-208ENST00000543082 LNPKQ9C0E8 428 aa12.04□□□□□ -0.48
TCF4-208ENST00000543082 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.04□□□□□ -0.48
TCF4-208ENST00000543082 CCDC39Q9UFE4 941 aa12.04□□□□□ -0.48
TCF4-208ENST00000543082 VWDEQ8N2E2 1590 aa12.03□□□□□ -0.48
TCF4-208ENST00000543082 NOS1P29475 1434 aa12.03□□□□□ -0.48
TCF4-208ENST00000543082 XPCQ01831 940 aaPredicted RBP12.03□□□□□ -0.48
TCF4-208ENST00000543082 QRICH2Q9H0J4 1663 aa12.03□□□□□ -0.48
TCF4-208ENST00000543082 CAVIN1Q6NZI2 390 aaKnown RBP12.03□□□□□ -0.48
TCF4-208ENST00000543082 UTP14CQ5TAP6 766 aaKnown RBP12.02□□□□□ -0.49
TCF4-208ENST00000543082 MCTP1Q6DN14 999 aa12.02□□□□□ -0.49
TCF4-208ENST00000543082 TMEM57Q8N5G2 664 aa12.02□□□□□ -0.49
TCF4-208ENST00000543082 SSH1Q8WYL5 1049 aa12.02□□□□□ -0.49
TCF4-208ENST00000543082 RBSNQ9H1K0 784 aa12.02□□□□□ -0.49
TCF4-208ENST00000543082 PLCH2O75038 1416 aa12.02□□□□□ -0.49
TCF4-208ENST00000543082 SETBP1Q9Y6X0 1596 aa12.02□□□□□ -0.49
TCF4-208ENST00000543082 IPO8O15397 1037 aaKnown RBP12.01□□□□□ -0.49
TCF4-208ENST00000543082 EXOSC9Q06265 439 aaKnown RBP12.01□□□□□ -0.49
TCF4-208ENST00000543082 MED14O60244 1454 aa12.01□□□□□ -0.49
TCF4-208ENST00000543082 NCLP19338 710 aaKnown RBP12.01□□□□□ -0.49
TCF4-208ENST00000543082 TBC1D9Q6ZT07 1266 aa12.01□□□□□ -0.49
TCF4-208ENST00000543082 LMBRD1Q9NUN5 540 aa12.01□□□□□ -0.49
TCF4-208ENST00000543082 IL16Q14005 1332 aa12.01□□□□□ -0.49
TCF4-208ENST00000543082 NRXN1Q9ULB1 1477 aa12.01□□□□□ -0.49
TCF4-208ENST00000543082 RABEP1Q15276 862 aa12□□□□□ -0.49
TCF4-208ENST00000543082 TSR2Q969E8 191 aaKnown RBP12□□□□□ -0.49
TCF4-208ENST00000543082 GCC1Q96CN9 775 aa12□□□□□ -0.49
TCF4-208ENST00000543082 CFAP44Q96MT7 982 aa12□□□□□ -0.49
TCF4-208ENST00000543082 CCDC94Q9BW85 323 aaPredicted RBP12□□□□□ -0.49
TCF4-208ENST00000543082 NOB1Q9ULX3 412 aaKnown RBP12□□□□□ -0.49
TCF4-208ENST00000543082 CYP2E1P05181 493 aaPredicted RBP12□□□□□ -0.49
TCF4-208ENST00000543082 TNNT2P45379 298 aaPredicted RBP12□□□□□ -0.49
TCF4-208ENST00000543082 MTHFSP49914 203 aa12□□□□□ -0.49
TCF4-208ENST00000543082 NSD2O96028 1365 aa12□□□□□ -0.49
TCF4-208ENST00000543082 RBM42Q9BTD8 480 aaKnown RBP11.99□□□□□ -0.49
TCF4-208ENST00000543082 ZFYVE16Q7Z3T8 1539 aa11.99□□□□□ -0.49
TCF4-208ENST00000543082 TRAPPC8Q9Y2L5 1435 aa11.99□□□□□ -0.49
TCF4-208ENST00000543082 CDC45O75419 566 aa11.99□□□□□ -0.49
TCF4-208ENST00000543082 U2AF1L5P0DN76 240 aaPredicted RBP11.99□□□□□ -0.49
TCF4-208ENST00000543082 U2AF1Q01081 240 aaKnown RBP eCLIP11.99□□□□□ -0.49
TCF4-208ENST00000543082 CHMP4BQ9H444 224 aaKnown RBP11.99□□□□□ -0.49
TCF4-208ENST00000543082 PRIM1P49642 420 aaKnown RBP11.98□□□□□ -0.49
TCF4-208ENST00000543082 DMTNQ08495 405 aa11.98□□□□□ -0.49
TCF4-208ENST00000543082 CFAP70Q5T0N1 1121 aa11.98□□□□□ -0.49
TCF4-208ENST00000543082 LRSAM1Q6UWE0 723 aa11.98□□□□□ -0.49
TCF4-208ENST00000543082 CWC22Q9HCG8 908 aaKnown RBP11.98□□□□□ -0.49
TCF4-208ENST00000543082 EFCAB2Q5VUJ9 269 aa11.97□□□□□ -0.49
TCF4-208ENST00000543082 ARAP3Q8WWN8 1544 aa11.97□□□□□ -0.49
TCF4-208ENST00000543082 MROH2AA6NES4 1674 aa11.97□□□□□ -0.49
TCF4-208ENST00000543082 ALDH1L2Q3SY69 923 aa11.97□□□□□ -0.49
TCF4-208ENST00000543082 ANKRD45Q5TZF3 282 aa11.97□□□□□ -0.49
TCF4-208ENST00000543082 PPIP5K1Q6PFW1 1433 aa11.97□□□□□ -0.49
TCF4-208ENST00000543082 CD109Q6YHK3 1445 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms