RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 FAM217BQ9NTX9 383 aaPredicted RBP6.62□□□□□ -1.35
SFSWAP-211ENST00000542813 DXOO77932 396 aaKnown RBP6.61□□□□□ -1.35
SFSWAP-211ENST00000542813 CLK2P49760 499 aaKnown RBP6.61□□□□□ -1.35
SFSWAP-211ENST00000542813 SMCPP49901 116 aaPredicted RBP6.61□□□□□ -1.35
SFSWAP-211ENST00000542813 RFC5P40937 340 aa6.6□□□□□ -1.35
SFSWAP-211ENST00000542813 SNIP1Q8TAD8 396 aaKnown RBP6.6□□□□□ -1.35
SFSWAP-211ENST00000542813 SNRKQ9NRH2 765 aa6.6□□□□□ -1.35
SFSWAP-211ENST00000542813 DACH1Q9UI36 760 aa6.6□□□□□ -1.35
SFSWAP-211ENST00000542813 HOXA2O43364 376 aa6.59□□□□□ -1.35
SFSWAP-211ENST00000542813 PPP1R15AO75807 674 aaPredicted RBP6.59□□□□□ -1.35
SFSWAP-211ENST00000542813 IRF5Q13568 498 aa6.59□□□□□ -1.35
SFSWAP-211ENST00000542813 TREML4Q6UXN2 200 aa6.59□□□□□ -1.35
SFSWAP-211ENST00000542813 RGS22Q8NE09 1264 aa6.59□□□□□ -1.35
SFSWAP-211ENST00000542813 SMPD1P17405 629 aa6.58□□□□□ -1.36
SFSWAP-211ENST00000542813 WWC1Q8IX03 1113 aa6.58□□□□□ -1.36
SFSWAP-211ENST00000542813 HLA-CQ95604 372 aa6.58□□□□□ -1.36
SFSWAP-211ENST00000542813 MRGPRX2Q96LB1 330 aa6.58□□□□□ -1.36
SFSWAP-211ENST00000542813 GZF1Q9H116 711 aaPredicted RBP6.58□□□□□ -1.36
SFSWAP-211ENST00000542813 GMPR2Q9P2T1 348 aaKnown RBP6.58□□□□□ -1.36
SFSWAP-211ENST00000542813 C11orf95C9JLR9 678 aaPredicted RBP6.57□□□□□ -1.36
SFSWAP-211ENST00000542813 MFAP1P55081 439 aaKnown RBP6.57□□□□□ -1.36
SFSWAP-211ENST00000542813 TMEM259Q4ZIN3 620 aa6.57□□□□□ -1.36
SFSWAP-211ENST00000542813 LCE2AQ5TA79 106 aaPredicted RBP6.57□□□□□ -1.36
SFSWAP-211ENST00000542813 TBC1D2Q9BYX2 928 aa6.57□□□□□ -1.36
SFSWAP-211ENST00000542813 MTMR7Q9Y216 660 aa6.57□□□□□ -1.36
SFSWAP-211ENST00000542813 WNT7BP56706 349 aa6.56□□□□□ -1.36
SFSWAP-211ENST00000542813 PDE4CQ08493 712 aa6.56□□□□□ -1.36
SFSWAP-211ENST00000542813 DIXDC1Q155Q3 683 aa6.56□□□□□ -1.36
SFSWAP-211ENST00000542813 CCDC24Q8N4L8 307 aa6.56□□□□□ -1.36
SFSWAP-211ENST00000542813 CALR3Q96L12 384 aaKnown RBP6.56□□□□□ -1.36
SFSWAP-211ENST00000542813 GDPD2Q9HCC8 539 aa6.56□□□□□ -1.36
SFSWAP-211ENST00000542813 J3QL48 77 aa6.55□□□□□ -1.36
SFSWAP-211ENST00000542813 MTMR14Q8NCE2 650 aa6.55□□□□□ -1.36
SFSWAP-211ENST00000542813 ACIN1Q9UKV3 1341 aaKnown RBP6.54□□□□□ -1.36
SFSWAP-211ENST00000542813 JUNDP17535 347 aa6.54□□□□□ -1.36
SFSWAP-211ENST00000542813 GUCA2AQ02747 115 aa6.54□□□□□ -1.36
SFSWAP-211ENST00000542813 FBXO31Q5XUX0 539 aaPredicted RBP6.54□□□□□ -1.36
SFSWAP-211ENST00000542813 PPP2R2DQ66LE6 453 aa6.54□□□□□ -1.36
SFSWAP-211ENST00000542813 PATL2C9JE40 543 aaKnown RBP6.53□□□□□ -1.36
SFSWAP-211ENST00000542813 WFS1O76024 890 aa6.53□□□□□ -1.36
SFSWAP-211ENST00000542813 ABL2P42684 1182 aa6.53□□□□□ -1.36
SFSWAP-211ENST00000542813 SKOR1P84550 965 aa6.53□□□□□ -1.36
SFSWAP-211ENST00000542813 RC3H1Q5TC82 1133 aaKnown RBP6.53□□□□□ -1.36
SFSWAP-211ENST00000542813 RETREG3Q86VR2 466 aa6.53□□□□□ -1.36
SFSWAP-211ENST00000542813 NUTM1Q86Y26 1132 aa6.53□□□□□ -1.36
SFSWAP-211ENST00000542813 GLMNQ92990 594 aa6.53□□□□□ -1.36
SFSWAP-211ENST00000542813 ATP13A2Q9NQ11 1180 aa6.53□□□□□ -1.36
SFSWAP-211ENST00000542813 LIMD1Q9UGP4 676 aa6.53□□□□□ -1.36
SFSWAP-211ENST00000542813 SOCS7O14512 581 aa6.52□□□□□ -1.37
SFSWAP-211ENST00000542813 FOXD4L5Q5VV16 416 aaPredicted RBP6.52□□□□□ -1.37
SFSWAP-211ENST00000542813 FOXD4L4Q8WXT5 416 aaPredicted RBP6.52□□□□□ -1.37
SFSWAP-211ENST00000542813 SYMPKQ92797 1274 aaKnown RBP6.52□□□□□ -1.37
SFSWAP-211ENST00000542813 SENP2Q9HC62 589 aa6.52□□□□□ -1.37
SFSWAP-211ENST00000542813 PRM3Q9NNZ6 103 aa6.52□□□□□ -1.37
SFSWAP-211ENST00000542813 POM121CA8CG34 1229 aa6.51□□□□□ -1.37
SFSWAP-211ENST00000542813 HPS1Q92902 700 aa6.51□□□□□ -1.37
SFSWAP-211ENST00000542813 NUDT12Q9BQG2 462 aa6.51□□□□□ -1.37
SFSWAP-211ENST00000542813 FDX1P10109 184 aa6.5□□□□□ -1.37
SFSWAP-211ENST00000542813 RBM25P49756 843 aaKnown RBP6.5□□□□□ -1.37
SFSWAP-211ENST00000542813 NFX1Q12986 1120 aaKnown RBP6.5□□□□□ -1.37
SFSWAP-211ENST00000542813 RIC3Q7Z5B4 369 aa6.5□□□□□ -1.37
SFSWAP-211ENST00000542813 TRIM47Q96LD4 638 aa6.5□□□□□ -1.37
SFSWAP-211ENST00000542813 ALDH1A1P00352 501 aa6.49□□□□□ -1.37
SFSWAP-211ENST00000542813 KCNA1Q09470 495 aa6.49□□□□□ -1.37
SFSWAP-211ENST00000542813 TUSC1Q2TAM9 212 aa6.49□□□□□ -1.37
SFSWAP-211ENST00000542813 SPIRE2Q8WWL2 714 aa6.49□□□□□ -1.37
SFSWAP-211ENST00000542813 KIFC2Q96AC6 838 aa6.49□□□□□ -1.37
SFSWAP-211ENST00000542813 PBXIP1Q96AQ6 731 aa6.49□□□□□ -1.37
SFSWAP-211ENST00000542813 TBC1D2BQ9UPU7 963 aa6.49□□□□□ -1.37
SFSWAP-211ENST00000542813 C6orf229H3BNL8 230 aa6.48□□□□□ -1.37
SFSWAP-211ENST00000542813 SNRPBP14678 240 aaKnown RBP6.48□□□□□ -1.37
SFSWAP-211ENST00000542813 PTCRAQ6ISU1 281 aaPredicted RBP6.48□□□□□ -1.37
SFSWAP-211ENST00000542813 EHBP1Q8NDI1 1231 aa6.48□□□□□ -1.37
SFSWAP-211ENST00000542813 PCDHGC3Q9UN70 934 aa6.48□□□□□ -1.37
SFSWAP-211ENST00000542813 USTQ9Y2C2 406 aa6.48□□□□□ -1.37
SFSWAP-211ENST00000542813 SPTLC1O15269 473 aa6.47□□□□□ -1.37
SFSWAP-211ENST00000542813 SIAH2O43255 324 aa6.47□□□□□ -1.37
SFSWAP-211ENST00000542813 WIPF1O43516 503 aa6.47□□□□□ -1.37
SFSWAP-211ENST00000542813 BRD1O95696 1058 aa6.47□□□□□ -1.37
SFSWAP-211ENST00000542813 CCNYL3P0C7X3 344 aa6.47□□□□□ -1.37
SFSWAP-211ENST00000542813 CSPP1Q1MSJ5 1256 aa6.47□□□□□ -1.37
SFSWAP-211ENST00000542813 RSBN1LQ6PCB5 846 aaPredicted RBP6.47□□□□□ -1.37
SFSWAP-211ENST00000542813 ZNF428Q96B54 188 aa6.47□□□□□ -1.37
SFSWAP-211ENST00000542813 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
SFSWAP-211ENST00000542813 TERTO14746 1132 aaKnown RBP6.46□□□□□ -1.38
SFSWAP-211ENST00000542813 AP1G2O75843 785 aa6.46□□□□□ -1.38
SFSWAP-211ENST00000542813 PTPRNQ16849 979 aa6.46□□□□□ -1.38
SFSWAP-211ENST00000542813 KRTAP4-6Q9BYQ5 205 aa6.46□□□□□ -1.38
SFSWAP-211ENST00000542813 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.45□□□□□ -1.38
SFSWAP-211ENST00000542813 CSB-PGBD3P0DP91 1061 aa6.45□□□□□ -1.38
SFSWAP-211ENST00000542813 SH3BP2P78314 561 aa6.45□□□□□ -1.38
SFSWAP-211ENST00000542813 QPCTQ16769 361 aa6.45□□□□□ -1.38
SFSWAP-211ENST00000542813 WASF2Q9Y6W5 498 aa6.45□□□□□ -1.38
SFSWAP-211ENST00000542813 LILRB3O75022 631 aa6.44□□□□□ -1.38
SFSWAP-211ENST00000542813 USP17L8P0C7I0 530 aa6.44□□□□□ -1.38
SFSWAP-211ENST00000542813 RFX1P22670 979 aa6.44□□□□□ -1.38
SFSWAP-211ENST00000542813 INSM1Q01101 510 aaPredicted RBP6.44□□□□□ -1.38
SFSWAP-211ENST00000542813 HDGFL1Q5TGJ6 251 aa6.44□□□□□ -1.38
SFSWAP-211ENST00000542813 UNC93B1Q9H1C4 597 aa6.44□□□□□ -1.38
SFSWAP-211ENST00000542813 EVA1BQ9NVM1 165 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms