RNA–Protein interactions for RNA: ENST00000542761.5

PTPN6-218, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-218ENST00000542761 ACEP12821 1306 aa24.12■■□□□ 1.45
PTPN6-218ENST00000542761 POLR3AO14802 1390 aaPredicted RBP24.12■■□□□ 1.45
PTPN6-218ENST00000542761 CRYBG1Q9Y4K1 1723 aa24.12■■□□□ 1.45
PTPN6-218ENST00000542761 PPIP5K1Q6PFW1 1433 aa24.11■■□□□ 1.45
PTPN6-218ENST00000542761 PLEKHG3A1L390 1219 aa24.1■■□□□ 1.45
PTPN6-218ENST00000542761 RALGAPBQ86X10 1494 aa24.09■■□□□ 1.45
PTPN6-218ENST00000542761 NWD2Q9ULI1 1742 aa24.08■■□□□ 1.45
PTPN6-218ENST00000542761 UNC5CLQ8IV45 518 aa24.08■■□□□ 1.45
PTPN6-218ENST00000542761 CARD11Q9BXL7 1154 aa24.06■■□□□ 1.44
PTPN6-218ENST00000542761 EVC2Q86UK5 1308 aa24.06■■□□□ 1.44
PTPN6-218ENST00000542761 PHRF1Q9P1Y6 1649 aaKnown RBP24.06■■□□□ 1.44
PTPN6-218ENST00000542761 GLI3P10071 1580 aa24.04■■□□□ 1.44
PTPN6-218ENST00000542761 NUTM2GQ5VZR2 741 aa24.04■■□□□ 1.44
PTPN6-218ENST00000542761 GJD4Q96KN9 370 aaPredicted RBP24.04■■□□□ 1.44
PTPN6-218ENST00000542761 FAM83GA6ND36 823 aa24.03■■□□□ 1.44
PTPN6-218ENST00000542761 UPF1Q92900 1129 aaKnown RBP eCLIP24.03■■□□□ 1.44
PTPN6-218ENST00000542761 COL14A1Q05707 1796 aaKnown RBP24.03■■□□□ 1.44
PTPN6-218ENST00000542761 NRAPQ86VF7 1730 aa24.02■■□□□ 1.44
PTPN6-218ENST00000542761 CABP1Q9NZU7 370 aa24.02■■□□□ 1.44
PTPN6-218ENST00000542761 VPS72Q15906 364 aa23.98■■□□□ 1.43
PTPN6-218ENST00000542761 USP6P35125 1406 aa23.97■■□□□ 1.43
PTPN6-218ENST00000542761 ABTB2Q8N961 1025 aa23.97■■□□□ 1.43
PTPN6-218ENST00000542761 PCGF6Q9BYE7 350 aa23.97■■□□□ 1.43
PTPN6-218ENST00000542761 BTG4Q9NY30 223 aa23.97■■□□□ 1.43
PTPN6-218ENST00000542761 SBNO2Q9Y2G9 1366 aa23.97■■□□□ 1.43
PTPN6-218ENST00000542761 CCDC9Q9Y3X0 531 aaKnown RBP23.97■■□□□ 1.43
PTPN6-218ENST00000542761 NRKQ7Z2Y5 1582 aa23.96■■□□□ 1.43
PTPN6-218ENST00000542761 KIAA0232Q92628 1395 aa23.96■■□□□ 1.43
PTPN6-218ENST00000542761 PRDM11Q9NQV5 511 aa23.96■■□□□ 1.43
PTPN6-218ENST00000542761 AKAP12Q02952 1782 aa23.95■■□□□ 1.42
PTPN6-218ENST00000542761 ATAD2Q6PL18 1390 aa23.94■■□□□ 1.42
PTPN6-218ENST00000542761 BRWD3Q6RI45 1802 aa23.94■■□□□ 1.42
PTPN6-218ENST00000542761 BRD4O60885 1362 aaPredicted RBP23.93■■□□□ 1.42
PTPN6-218ENST00000542761 ZC3H6P61129 1189 aaKnown RBP23.93■■□□□ 1.42
PTPN6-218ENST00000542761 USP19O94966 1318 aa23.92■■□□□ 1.42
PTPN6-218ENST00000542761 CHRNA2Q15822 529 aa23.92■■□□□ 1.42
PTPN6-218ENST00000542761 EP400Q96L91 3159 aa23.91■■□□□ 1.42
PTPN6-218ENST00000542761 PIK3C2AO00443 1686 aa23.91■■□□□ 1.42
PTPN6-218ENST00000542761 NLRP13Q86W25 1043 aa23.9■■□□□ 1.42
PTPN6-218ENST00000542761 SSH2Q76I76 1423 aa23.9■■□□□ 1.42
PTPN6-218ENST00000542761 SEPT12Q8IYM1 358 aa23.88■■□□□ 1.41
PTPN6-218ENST00000542761 MON2Q7Z3U7 1717 aa23.87■■□□□ 1.41
PTPN6-218ENST00000542761 CPSF1Q10570 1443 aaKnown RBP23.86■■□□□ 1.41
PTPN6-218ENST00000542761 NLRP6P59044 892 aa23.86■■□□□ 1.41
PTPN6-218ENST00000542761 SLIT3O75094 1523 aa23.85■■□□□ 1.41
PTPN6-218ENST00000542761 GCP02774 474 aa23.85■■□□□ 1.41
PTPN6-218ENST00000542761 ZNF692Q9BU19 519 aaPredicted RBP23.85■■□□□ 1.41
PTPN6-218ENST00000542761 CPDO75976 1380 aa23.85■■□□□ 1.41
PTPN6-218ENST00000542761 KTN1Q86UP2 1357 aaKnown RBP23.85■■□□□ 1.41
PTPN6-218ENST00000542761 LMO7Q8WWI1 1683 aa23.85■■□□□ 1.41
PTPN6-218ENST00000542761 TTC21BQ7Z4L5 1316 aa23.84■■□□□ 1.41
PTPN6-218ENST00000542761 CLSPNQ9HAW4 1339 aa23.84■■□□□ 1.41
PTPN6-218ENST00000542761 ST20-MTHFSA0A0A6YYL1 179 aa23.84■■□□□ 1.41
PTPN6-218ENST00000542761 A0A0G2JS52 829 aa23.84■■□□□ 1.41
PTPN6-218ENST00000542761 MYT1Q01538 1121 aa23.84■■□□□ 1.41
PTPN6-218ENST00000542761 FAM98CQ17RN3 349 aaKnown RBP23.84■■□□□ 1.41
PTPN6-218ENST00000542761 STRN4Q9NRL3 753 aa23.84■■□□□ 1.41
PTPN6-218ENST00000542761 SPATA31A5Q5VU36 1347 aa23.84■■□□□ 1.41
PTPN6-218ENST00000542761 SPATA31A7Q8IWB4 1347 aa23.84■■□□□ 1.41
PTPN6-218ENST00000542761 ONECUT3O60422 494 aaPredicted RBP23.83■■□□□ 1.41
PTPN6-218ENST00000542761 TMC1Q8TDI8 760 aa23.83■■□□□ 1.41
PTPN6-218ENST00000542761 CAMTA1Q9Y6Y1 1673 aa23.83■■□□□ 1.4
PTPN6-218ENST00000542761 TESK2Q96S53 571 aa23.82■■□□□ 1.4
PTPN6-218ENST00000542761 CD163L1Q9NR16 1453 aa23.81■■□□□ 1.4
PTPN6-218ENST00000542761 ZBTB7CA1YPR0 619 aa23.81■■□□□ 1.4
PTPN6-218ENST00000542761 USP47Q96K76 1375 aa23.8■■□□□ 1.4
PTPN6-218ENST00000542761 TTC21AQ8NDW8 1320 aa23.8■■□□□ 1.4
PTPN6-218ENST00000542761 SLC12A5Q9H2X9 1139 aa23.79■■□□□ 1.4
PTPN6-218ENST00000542761 THSD7AQ9UPZ6 1657 aa23.79■■□□□ 1.4
PTPN6-218ENST00000542761 SPATA31A1Q5TZJ5 1347 aa23.78■■□□□ 1.4
PTPN6-218ENST00000542761 EVA1CP58658 441 aa23.77■■□□□ 1.4
PTPN6-218ENST00000542761 KRT27Q7Z3Y8 459 aa23.77■■□□□ 1.4
PTPN6-218ENST00000542761 TIMELESSQ9UNS1 1208 aa23.77■■□□□ 1.4
PTPN6-218ENST00000542761 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.76■■□□□ 1.39
PTPN6-218ENST00000542761 SOX12O15370 315 aa23.75■■□□□ 1.39
PTPN6-218ENST00000542761 HDGFL2Q7Z4V5 671 aaPredicted RBP23.75■■□□□ 1.39
PTPN6-218ENST00000542761 CCER1Q8TC90 406 aaPredicted RBP23.75■■□□□ 1.39
PTPN6-218ENST00000542761 PUS7Q96PZ0 661 aaKnown RBP23.75■■□□□ 1.39
PTPN6-218ENST00000542761 USP35Q9P2H5 1018 aa23.75■■□□□ 1.39
PTPN6-218ENST00000542761 COL5A2P05997 1499 aaPredicted RBP23.75■■□□□ 1.39
PTPN6-218ENST00000542761 COL18A1P39060 1754 aa23.74■■□□□ 1.39
PTPN6-218ENST00000542761 LARP1Q6PKG0 1096 aaKnown RBP23.74■■□□□ 1.39
PTPN6-218ENST00000542761 A0A1W2PP64 1363 aa23.74■■□□□ 1.39
PTPN6-218ENST00000542761 ZRANB1Q9UGI0 708 aa23.73■■□□□ 1.39
PTPN6-218ENST00000542761 AATKQ6ZMQ8 1374 aa23.73■■□□□ 1.39
PTPN6-218ENST00000542761 USP54Q70EL1 1684 aa23.73■■□□□ 1.39
PTPN6-218ENST00000542761 NME9Q86XW9 330 aa23.72■■□□□ 1.39
PTPN6-218ENST00000542761 TERF2IPQ9NYB0 399 aa23.72■■□□□ 1.39
PTPN6-218ENST00000542761 NFAT5O94916 1531 aa23.72■■□□□ 1.39
PTPN6-218ENST00000542761 BLMP54132 1417 aaPredicted RBP23.71■■□□□ 1.39
PTPN6-218ENST00000542761 EDC4Q6P2E9 1401 aaKnown RBP23.71■■□□□ 1.39
PTPN6-218ENST00000542761 CCDC125Q86Z20 511 aa23.71■■□□□ 1.39
PTPN6-218ENST00000542761 KCNH5Q8NCM2 988 aa23.71■■□□□ 1.39
PTPN6-218ENST00000542761 SLC24A1O60721 1099 aa23.7■■□□□ 1.38
PTPN6-218ENST00000542761 RGPD5Q99666 1765 aa23.7■■□□□ 1.38
PTPN6-218ENST00000542761 USP31Q70CQ4 1352 aa23.69■■□□□ 1.38
PTPN6-218ENST00000542761 NINLQ9Y2I6 1382 aa23.69■■□□□ 1.38
PTPN6-218ENST00000542761 TMF1P82094 1093 aa23.68■■□□□ 1.38
PTPN6-218ENST00000542761 FAM182BQ5T319 152 aa23.68■■□□□ 1.38
PTPN6-218ENST00000542761 ARHGEF25Q86VW2 580 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms