RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 BAP1Q92560 729 aa6.22□□□□□ -1.41
KNTC1-213ENST00000542727 F12P00748 615 aaPredicted RBP6.21□□□□□ -1.42
KNTC1-213ENST00000542727 CTHP32929 405 aa6.21□□□□□ -1.42
KNTC1-213ENST00000542727 NFX1Q12986 1120 aaKnown RBP6.21□□□□□ -1.42
KNTC1-213ENST00000542727 LINC01559Q495D7 138 aa6.21□□□□□ -1.42
KNTC1-213ENST00000542727 FAM174AQ8TBP5 190 aa6.21□□□□□ -1.42
KNTC1-213ENST00000542727 CFAP99D6REC4 459 aa6.2□□□□□ -1.42
KNTC1-213ENST00000542727 WIPF1O43516 503 aa6.2□□□□□ -1.42
KNTC1-213ENST00000542727 SNRPBP14678 240 aaKnown RBP6.2□□□□□ -1.42
KNTC1-213ENST00000542727 ARMC2Q8NEN0 867 aa6.2□□□□□ -1.42
KNTC1-213ENST00000542727 PCDHB15Q9Y5E8 787 aa6.2□□□□□ -1.42
KNTC1-213ENST00000542727 TERTO14746 1132 aaKnown RBP6.19□□□□□ -1.42
KNTC1-213ENST00000542727 MYSM1Q5VVJ2 828 aa6.19□□□□□ -1.42
KNTC1-213ENST00000542727 NPAS3Q8IXF0 933 aa6.19□□□□□ -1.42
KNTC1-213ENST00000542727 HELBQ8NG08 1087 aaPredicted RBP6.19□□□□□ -1.42
KNTC1-213ENST00000542727 RSPH6AQ9H0K4 717 aa6.19□□□□□ -1.42
KNTC1-213ENST00000542727 TLL2Q9Y6L7 1015 aa6.19□□□□□ -1.42
KNTC1-213ENST00000542727 NUTM2BA6NNL0 878 aaPredicted RBP6.18□□□□□ -1.42
KNTC1-213ENST00000542727 NUTM2EB1AL46 878 aaPredicted RBP6.18□□□□□ -1.42
KNTC1-213ENST00000542727 ADH1CP00326 375 aa6.18□□□□□ -1.42
KNTC1-213ENST00000542727 INSM1Q01101 510 aaPredicted RBP6.18□□□□□ -1.42
KNTC1-213ENST00000542727 NNTQ13423 1086 aa6.18□□□□□ -1.42
KNTC1-213ENST00000542727 NUTM2DQ5VT03 806 aaPredicted RBP6.18□□□□□ -1.42
KNTC1-213ENST00000542727 BPHLQ86WA6 291 aaPredicted RBP6.18□□□□□ -1.42
KNTC1-213ENST00000542727 NUTM2AQ8IVF1 878 aaPredicted RBP6.18□□□□□ -1.42
KNTC1-213ENST00000542727 CDK15Q96Q40 435 aa6.18□□□□□ -1.42
KNTC1-213ENST00000542727 LILRB3O75022 631 aa6.17□□□□□ -1.42
KNTC1-213ENST00000542727 NBPF14Q5TI25 921 aa6.17□□□□□ -1.42
KNTC1-213ENST00000542727 SLC16A10Q8TF71 515 aa6.17□□□□□ -1.42
KNTC1-213ENST00000542727 MAP10Q9P2G4 905 aa6.17□□□□□ -1.42
KNTC1-213ENST00000542727 CLK2P49760 499 aaKnown RBP6.16□□□□□ -1.42
KNTC1-213ENST00000542727 NR5A1Q13285 461 aa6.16□□□□□ -1.42
KNTC1-213ENST00000542727 CSPP1Q1MSJ5 1256 aa6.16□□□□□ -1.42
KNTC1-213ENST00000542727 TRIM46Q7Z4K8 759 aa6.16□□□□□ -1.42
KNTC1-213ENST00000542727 CABLES1Q8TDN4 633 aa6.16□□□□□ -1.42
KNTC1-213ENST00000542727 GPKOWQ92917 476 aaPredicted RBP eCLIP6.16□□□□□ -1.42
KNTC1-213ENST00000542727 SLC24A3Q9HC58 644 aa6.16□□□□□ -1.42
KNTC1-213ENST00000542727 NXF1Q9UBU9 619 aaKnown RBP6.16□□□□□ -1.42
KNTC1-213ENST00000542727 LIMD1Q9UGP4 676 aa6.16□□□□□ -1.42
KNTC1-213ENST00000542727 BMP1P13497 986 aa6.15□□□□□ -1.42
KNTC1-213ENST00000542727 SCARF1Q14162 830 aa6.15□□□□□ -1.42
KNTC1-213ENST00000542727 AGERQ15109 404 aa6.15□□□□□ -1.42
KNTC1-213ENST00000542727 TSC1Q92574 1164 aa6.15□□□□□ -1.42
KNTC1-213ENST00000542727 STK17AQ9UEE5 414 aa6.15□□□□□ -1.42
KNTC1-213ENST00000542727 PER1O15534 1290 aaPredicted RBP6.14□□□□□ -1.43
KNTC1-213ENST00000542727 TIMP2P16035 220 aa6.14□□□□□ -1.43
KNTC1-213ENST00000542727 WDR4P57081 412 aaKnown RBP6.14□□□□□ -1.43
KNTC1-213ENST00000542727 QPCTQ16769 361 aa6.14□□□□□ -1.43
KNTC1-213ENST00000542727 MRPL14Q6P1L8 145 aaKnown RBP6.14□□□□□ -1.43
KNTC1-213ENST00000542727 FOXJ1Q92949 421 aa6.13□□□□□ -1.43
KNTC1-213ENST00000542727 IRF7Q92985 503 aa6.13□□□□□ -1.43
KNTC1-213ENST00000542727 ZFP42Q96MM3 310 aa6.13□□□□□ -1.43
KNTC1-213ENST00000542727 MAP4K5Q9Y4K4 846 aa6.13□□□□□ -1.43
KNTC1-213ENST00000542727 ARID5BQ14865 1188 aa6.12□□□□□ -1.43
KNTC1-213ENST00000542727 SH3RF1Q7Z6J0 888 aa6.12□□□□□ -1.43
KNTC1-213ENST00000542727 TRMT44Q8IYL2 757 aaKnown RBP6.12□□□□□ -1.43
KNTC1-213ENST00000542727 C1QTNF2Q9BXJ5 285 aa6.12□□□□□ -1.43
KNTC1-213ENST00000542727 KLF16Q9BXK1 252 aaPredicted RBP6.12□□□□□ -1.43
KNTC1-213ENST00000542727 UPP2O95045 317 aa6.11□□□□□ -1.43
KNTC1-213ENST00000542727 FAM181BA6NEQ2 426 aa6.1□□□□□ -1.43
KNTC1-213ENST00000542727 ZIC2O95409 532 aaPredicted RBP6.1□□□□□ -1.43
KNTC1-213ENST00000542727 C4orf48Q5BLP8 95 aa6.1□□□□□ -1.43
KNTC1-213ENST00000542727 SH3BP5LQ7L8J4 393 aa6.1□□□□□ -1.43
KNTC1-213ENST00000542727 DDRGK1Q96HY6 314 aa6.1□□□□□ -1.43
KNTC1-213ENST00000542727 ZC3H4Q9UPT8 1303 aaKnown RBP6.09□□□□□ -1.43
KNTC1-213ENST00000542727 H3BM21 787 aa6.09□□□□□ -1.43
KNTC1-213ENST00000542727 GRM5P41594 1212 aa6.09□□□□□ -1.43
KNTC1-213ENST00000542727 SKIV2LQ15477 1246 aaKnown RBP6.09□□□□□ -1.43
KNTC1-213ENST00000542727 SH3D19Q5HYK7 790 aa6.09□□□□□ -1.43
KNTC1-213ENST00000542727 RTL5Q5HYW3 569 aaPredicted RBP6.09□□□□□ -1.43
KNTC1-213ENST00000542727 PURBQ96QR8 312 aaKnown RBP6.09□□□□□ -1.43
KNTC1-213ENST00000542727 CDV3Q9UKY7 258 aaKnown RBP6.09□□□□□ -1.43
KNTC1-213ENST00000542727 LCE2CQ5TA81 110 aa6.08□□□□□ -1.44
KNTC1-213ENST00000542727 VASH1Q7L8A9 365 aaPredicted RBP6.08□□□□□ -1.44
KNTC1-213ENST00000542727 ITPKCQ96DU7 683 aa6.08□□□□□ -1.44
KNTC1-213ENST00000542727 EMILIN1Q9Y6C2 1016 aa6.08□□□□□ -1.44
KNTC1-213ENST00000542727 NR3C2P08235 984 aa6.07□□□□□ -1.44
KNTC1-213ENST00000542727 FSHRP23945 695 aa6.07□□□□□ -1.44
KNTC1-213ENST00000542727 PDXDC2PQ6P474 469 aa6.07□□□□□ -1.44
KNTC1-213ENST00000542727 LINC00528Q8N1L1 170 aa6.07□□□□□ -1.44
KNTC1-213ENST00000542727 MEIOBQ8N635 442 aa6.07□□□□□ -1.44
KNTC1-213ENST00000542727 POLR3EQ9NVU0 708 aa6.07□□□□□ -1.44
KNTC1-213ENST00000542727 MAGEB6P1A0A0J9YX57 407 aa6.06□□□□□ -1.44
KNTC1-213ENST00000542727 PPP2R2DQ66LE6 453 aa6.06□□□□□ -1.44
KNTC1-213ENST00000542727 CCDC116Q8IYX3 515 aa6.06□□□□□ -1.44
KNTC1-213ENST00000542727 PNMA1Q8ND90 353 aa6.06□□□□□ -1.44
KNTC1-213ENST00000542727 BCANQ96GW7 911 aa6.06□□□□□ -1.44
KNTC1-213ENST00000542727 TSEN34Q9BSV6 310 aaKnown RBP6.06□□□□□ -1.44
KNTC1-213ENST00000542727 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.06□□□□□ -1.44
KNTC1-213ENST00000542727 ZFAND3Q9H8U3 227 aa6.06□□□□□ -1.44
KNTC1-213ENST00000542727 MAN1A2O60476 641 aa6.05□□□□□ -1.44
KNTC1-213ENST00000542727 VSIG8P0DPA2 414 aa6.05□□□□□ -1.44
KNTC1-213ENST00000542727 CTDSPL2Q05D32 466 aa6.05□□□□□ -1.44
KNTC1-213ENST00000542727 DHX9Q08211 1270 aaKnown RBP6.05□□□□□ -1.44
KNTC1-213ENST00000542727 ERFEQ4G0M1 354 aa6.05□□□□□ -1.44
KNTC1-213ENST00000542727 SLC10A4Q96EP9 437 aa6.05□□□□□ -1.44
KNTC1-213ENST00000542727 ARHGAP9Q9BRR9 750 aa6.05□□□□□ -1.44
KNTC1-213ENST00000542727 KDM4CQ9H3R0 1056 aa6.05□□□□□ -1.44
KNTC1-213ENST00000542727 PGPEP1Q9NXJ5 209 aa6.05□□□□□ -1.44
KNTC1-213ENST00000542727 FKBPLQ9UIM3 349 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms