RNA–Protein interactions for RNA: ENST00000542421.1

ZNF28-206, Transcript of zinc finger protein 28, humanhuman

TSL 3

Gene ZNF28, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-206ENST00000542421 PTCH1Q13635 1447 aa7.37□□□□□ -1.23
ZNF28-206ENST00000542421 LRPPRCP42704 1394 aaKnown RBP7.37□□□□□ -1.23
ZNF28-206ENST00000542421 ABCC11Q96J66 1382 aa7.37□□□□□ -1.23
ZNF28-206ENST00000542421 ANKRD30BQ9BXX2 1392 aa7.37□□□□□ -1.23
ZNF28-206ENST00000542421 ADGRF5Q8IZF2 1346 aa7.37□□□□□ -1.23
ZNF28-206ENST00000542421 FOXO3O43524 673 aa7.37□□□□□ -1.23
ZNF28-206ENST00000542421 C14orf93Q9H972 538 aaKnown RBP7.37□□□□□ -1.23
ZNF28-206ENST00000542421 SNPHO15079 494 aa7.36□□□□□ -1.23
ZNF28-206ENST00000542421 NEUROD1Q13562 356 aa7.36□□□□□ -1.23
ZNF28-206ENST00000542421 WAPLQ7Z5K2 1190 aa7.36□□□□□ -1.23
ZNF28-206ENST00000542421 CCDC125Q86Z20 511 aa7.36□□□□□ -1.23
ZNF28-206ENST00000542421 STK26Q9P289 416 aa7.36□□□□□ -1.23
ZNF28-206ENST00000542421 NEXMIFQ5QGS0 1516 aa7.36□□□□□ -1.23
ZNF28-206ENST00000542421 TMEM132EQ6IEE7 984 aa7.35□□□□□ -1.23
ZNF28-206ENST00000542421 TIMELESSQ9UNS1 1208 aa7.35□□□□□ -1.23
ZNF28-206ENST00000542421 FAM205CA6NFA0 338 aa7.34□□□□□ -1.23
ZNF28-206ENST00000542421 PSME1Q06323 249 aa7.34□□□□□ -1.23
ZNF28-206ENST00000542421 STAC3Q96MF2 364 aa7.34□□□□□ -1.23
ZNF28-206ENST00000542421 SIN3AQ96ST3 1273 aa7.34□□□□□ -1.23
ZNF28-206ENST00000542421 XRN1Q8IZH2 1706 aaKnown RBP7.34□□□□□ -1.23
ZNF28-206ENST00000542421 CCDC144AA2RUR9 1427 aa7.34□□□□□ -1.23
ZNF28-206ENST00000542421 NRXN3Q9Y4C0 1643 aa7.34□□□□□ -1.24
ZNF28-206ENST00000542421 SHPRHQ149N8 1683 aa7.33□□□□□ -1.24
ZNF28-206ENST00000542421 KRT28Q7Z3Y7 464 aa7.33□□□□□ -1.24
ZNF28-206ENST00000542421 UNC5CLQ8IV45 518 aa7.33□□□□□ -1.24
ZNF28-206ENST00000542421 GJD4Q96KN9 370 aaPredicted RBP7.33□□□□□ -1.24
ZNF28-206ENST00000542421 TECPR2O15040 1411 aa7.33□□□□□ -1.24
ZNF28-206ENST00000542421 SPATA31E1Q6ZUB1 1445 aa7.33□□□□□ -1.24
ZNF28-206ENST00000542421 SPATA31A3Q5VYP0 1347 aa7.32□□□□□ -1.24
ZNF28-206ENST00000542421 MYO5BQ9ULV0 1848 aa7.32□□□□□ -1.24
ZNF28-206ENST00000542421 PHF8Q9UPP1 1060 aa7.32□□□□□ -1.24
ZNF28-206ENST00000542421 ATAD2Q6PL18 1390 aa7.32□□□□□ -1.24
ZNF28-206ENST00000542421 CLTCL1P53675 1640 aa7.31□□□□□ -1.24
ZNF28-206ENST00000542421 NUTM2FA1L443 756 aa7.31□□□□□ -1.24
ZNF28-206ENST00000542421 ONECUT3O60422 494 aaPredicted RBP7.31□□□□□ -1.24
ZNF28-206ENST00000542421 XPCQ01831 940 aaPredicted RBP7.31□□□□□ -1.24
ZNF28-206ENST00000542421 CFAP70Q5T0N1 1121 aa7.31□□□□□ -1.24
ZNF28-206ENST00000542421 TRPC6Q9Y210 931 aa7.31□□□□□ -1.24
ZNF28-206ENST00000542421 SPHKAPQ2M3C7 1700 aa7.3□□□□□ -1.24
ZNF28-206ENST00000542421 RGS12O14924 1447 aa7.3□□□□□ -1.24
ZNF28-206ENST00000542421 ATRNO75882 1429 aa7.3□□□□□ -1.24
ZNF28-206ENST00000542421 POGKQ9P215 609 aa7.3□□□□□ -1.24
ZNF28-206ENST00000542421 BCL9LQ86UU0 1499 aa7.3□□□□□ -1.24
ZNF28-206ENST00000542421 YTHDC2Q9H6S0 1430 aaKnown RBP7.29□□□□□ -1.24
ZNF28-206ENST00000542421 VPS72Q15906 364 aa7.29□□□□□ -1.24
ZNF28-206ENST00000542421 PRAM1Q96QH2 718 aa7.29□□□□□ -1.24
ZNF28-206ENST00000542421 NHSL1Q5SYE7 1610 aa7.29□□□□□ -1.24
ZNF28-206ENST00000542421 TONSLQ96HA7 1378 aa7.29□□□□□ -1.24
ZNF28-206ENST00000542421 PLEKHH1Q9ULM0 1364 aa7.29□□□□□ -1.24
ZNF28-206ENST00000542421 MYOM2P54296 1465 aa7.29□□□□□ -1.24
ZNF28-206ENST00000542421 PIK3C2GO75747 1445 aa7.28□□□□□ -1.24
ZNF28-206ENST00000542421 LAMC1P11047 1609 aa7.28□□□□□ -1.24
ZNF28-206ENST00000542421 SBNO1A3KN83 1393 aa7.28□□□□□ -1.24
ZNF28-206ENST00000542421 PXDNQ92626 1479 aa7.28□□□□□ -1.24
ZNF28-206ENST00000542421 FAM83GA6ND36 823 aa7.27□□□□□ -1.25
ZNF28-206ENST00000542421 HAP1P54257 671 aaPredicted RBP7.27□□□□□ -1.25
ZNF28-206ENST00000542421 SEPT12Q8IYM1 358 aa7.27□□□□□ -1.25
ZNF28-206ENST00000542421 ARHGEF10O15013 1369 aa7.26□□□□□ -1.25
ZNF28-206ENST00000542421 WASLO00401 505 aaPredicted RBP7.26□□□□□ -1.25
ZNF28-206ENST00000542421 LMOD2Q6P5Q4 547 aa7.26□□□□□ -1.25
ZNF28-206ENST00000542421 CABLES1Q8TDN4 633 aa7.26□□□□□ -1.25
ZNF28-206ENST00000542421 CDC42BPGQ6DT37 1551 aa7.25□□□□□ -1.25
ZNF28-206ENST00000542421 NRXN1Q9ULB1 1477 aa7.25□□□□□ -1.25
ZNF28-206ENST00000542421 KIF1BO60333 1816 aa7.25□□□□□ -1.25
ZNF28-206ENST00000542421 TIE1P35590 1138 aa7.25□□□□□ -1.25
ZNF28-206ENST00000542421 SF3B2Q13435 895 aaKnown RBP7.25□□□□□ -1.25
ZNF28-206ENST00000542421 SAFB2Q14151 953 aaKnown RBP eCLIP7.25□□□□□ -1.25
ZNF28-206ENST00000542421 PMFBP1Q8TBY8 1022 aa7.25□□□□□ -1.25
ZNF28-206ENST00000542421 DCAF11Q8TEB1 546 aa7.25□□□□□ -1.25
ZNF28-206ENST00000542421 TRAK1Q9UPV9 953 aa7.25□□□□□ -1.25
ZNF28-206ENST00000542421 KDM2AQ9Y2K7 1162 aa7.25□□□□□ -1.25
ZNF28-206ENST00000542421 SLIT2O94813 1529 aa7.25□□□□□ -1.25
ZNF28-206ENST00000542421 NALCNQ8IZF0 1738 aa7.24□□□□□ -1.25
ZNF28-206ENST00000542421 GPRASP1Q5JY77 1395 aa7.24□□□□□ -1.25
ZNF28-206ENST00000542421 ZNF316A6NFI3 1004 aaPredicted RBP7.24□□□□□ -1.25
ZNF28-206ENST00000542421 IER5LQ5T953 404 aa7.24□□□□□ -1.25
ZNF28-206ENST00000542421 KRT27Q7Z3Y8 459 aa7.24□□□□□ -1.25
ZNF28-206ENST00000542421 NGDNQ8NEJ9 315 aaKnown RBP7.24□□□□□ -1.25
ZNF28-206ENST00000542421 CCDC9Q9Y3X0 531 aaKnown RBP7.24□□□□□ -1.25
ZNF28-206ENST00000542421 ANKARQ7Z5J8 1434 aa7.24□□□□□ -1.25
ZNF28-206ENST00000542421 EIF3AQ14152 1382 aaKnown RBP7.23□□□□□ -1.25
ZNF28-206ENST00000542421 L3MBTL2Q969R5 705 aa7.23□□□□□ -1.25
ZNF28-206ENST00000542421 BLMP54132 1417 aaPredicted RBP7.23□□□□□ -1.25
ZNF28-206ENST00000542421 TNS3Q68CZ2 1445 aa7.23□□□□□ -1.25
ZNF28-206ENST00000542421 RALGAPBQ86X10 1494 aa7.23□□□□□ -1.25
ZNF28-206ENST00000542421 COL22A1Q8NFW1 1626 aaPredicted RBP7.23□□□□□ -1.25
ZNF28-206ENST00000542421 SETD1AO15047 1707 aaKnown RBP7.22□□□□□ -1.25
ZNF28-206ENST00000542421 NUDT16Q96DE0 195 aaKnown RBP7.22□□□□□ -1.25
ZNF28-206ENST00000542421 HIRIP3Q9BW71 556 aaPredicted RBP7.22□□□□□ -1.25
ZNF28-206ENST00000542421 BTG4Q9NY30 223 aa7.22□□□□□ -1.25
ZNF28-206ENST00000542421 CCDC61Q9Y6R9 512 aa7.22□□□□□ -1.25
ZNF28-206ENST00000542421 MINK1Q8N4C8 1332 aaPredicted RBP7.22□□□□□ -1.25
ZNF28-206ENST00000542421 PLEKHG3A1L390 1219 aa7.21□□□□□ -1.26
ZNF28-206ENST00000542421 DEFB132Q7Z7B7 95 aa7.21□□□□□ -1.26
ZNF28-206ENST00000542421 PRR36Q9H6K5 1346 aa7.21□□□□□ -1.26
ZNF28-206ENST00000542421 PPLO60437 1756 aa7.2□□□□□ -1.26
ZNF28-206ENST00000542421 TTLL13PA6NNM8 815 aa7.2□□□□□ -1.26
ZNF28-206ENST00000542421 PLEKHG5O94827 1062 aa7.2□□□□□ -1.26
ZNF28-206ENST00000542421 BAG6P46379 1132 aa7.2□□□□□ -1.26
ZNF28-206ENST00000542421 FAM98CQ17RN3 349 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms