RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 SLC24A1O60721 1099 aa28.34■■■□□ 2.13
CACNA2D4-215ENST00000542340 QTRT2Q9H974 415 aaKnown RBP28.34■■■□□ 2.13
CACNA2D4-215ENST00000542340 USP21Q9UK80 565 aa28.34■■■□□ 2.13
CACNA2D4-215ENST00000542340 MARF1Q9Y4F3 1742 aaKnown RBP28.34■■■□□ 2.13
CACNA2D4-215ENST00000542340 BRD4O60885 1362 aaPredicted RBP28.34■■■□□ 2.13
CACNA2D4-215ENST00000542340 PLEKHG5O94827 1062 aa28.33■■■□□ 2.13
CACNA2D4-215ENST00000542340 RXRBP28702 533 aa28.33■■■□□ 2.13
CACNA2D4-215ENST00000542340 TESK2Q96S53 571 aa28.32■■■□□ 2.12
CACNA2D4-215ENST00000542340 PUS7Q96PZ0 661 aaKnown RBP28.31■■■□□ 2.12
CACNA2D4-215ENST00000542340 ZNF692Q9BU19 519 aaPredicted RBP28.3■■■□□ 2.12
CACNA2D4-215ENST00000542340 USP47Q96K76 1375 aa28.29■■■□□ 2.12
CACNA2D4-215ENST00000542340 ABCA3Q99758 1704 aa28.29■■■□□ 2.12
CACNA2D4-215ENST00000542340 BCL9LQ86UU0 1499 aa28.28■■■□□ 2.12
CACNA2D4-215ENST00000542340 USP6P35125 1406 aa28.28■■■□□ 2.12
CACNA2D4-215ENST00000542340 TRPC5Q9UL62 973 aaPredicted RBP28.28■■■□□ 2.12
CACNA2D4-215ENST00000542340 RBM6P78332 1123 aaKnown RBP28.27■■■□□ 2.12
CACNA2D4-215ENST00000542340 ABTB2Q8N961 1025 aa28.27■■■□□ 2.12
CACNA2D4-215ENST00000542340 SLIT2O94813 1529 aa28.26■■■□□ 2.11
CACNA2D4-215ENST00000542340 NUTM2GQ5VZR2 741 aa28.24■■■□□ 2.11
CACNA2D4-215ENST00000542340 ATRNO75882 1429 aa28.24■■■□□ 2.11
CACNA2D4-215ENST00000542340 SSH2Q76I76 1423 aa28.24■■■□□ 2.11
CACNA2D4-215ENST00000542340 CDK12Q9NYV4 1490 aaPredicted RBP28.23■■■□□ 2.11
CACNA2D4-215ENST00000542340 FAM83GA6ND36 823 aa28.23■■■□□ 2.11
CACNA2D4-215ENST00000542340 UNC5CLQ8IV45 518 aa28.23■■■□□ 2.11
CACNA2D4-215ENST00000542340 CPSF1Q10570 1443 aaKnown RBP28.23■■■□□ 2.11
CACNA2D4-215ENST00000542340 NLRP13Q86W25 1043 aa28.22■■■□□ 2.11
CACNA2D4-215ENST00000542340 CRYBG1Q9Y4K1 1723 aa28.22■■■□□ 2.11
CACNA2D4-215ENST00000542340 TMC1Q8TDI8 760 aa28.2■■■□□ 2.1
CACNA2D4-215ENST00000542340 TMF1P82094 1093 aa28.19■■■□□ 2.1
CACNA2D4-215ENST00000542340 USP19O94966 1318 aa28.18■■■□□ 2.1
CACNA2D4-215ENST00000542340 SLC12A5Q9H2X9 1139 aa28.18■■■□□ 2.1
CACNA2D4-215ENST00000542340 KTN1Q86UP2 1357 aaKnown RBP28.18■■■□□ 2.1
CACNA2D4-215ENST00000542340 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.18■■■□□ 2.1
CACNA2D4-215ENST00000542340 TTC21BQ7Z4L5 1316 aa28.18■■■□□ 2.1
CACNA2D4-215ENST00000542340 AKAP12Q02952 1782 aa28.17■■■□□ 2.1
CACNA2D4-215ENST00000542340 NLRP6P59044 892 aa28.16■■■□□ 2.1
CACNA2D4-215ENST00000542340 GJD4Q96KN9 370 aaPredicted RBP28.16■■■□□ 2.1
CACNA2D4-215ENST00000542340 PRDM11Q9NQV5 511 aa28.16■■■□□ 2.1
CACNA2D4-215ENST00000542340 TTC21AQ8NDW8 1320 aa28.16■■■□□ 2.1
CACNA2D4-215ENST00000542340 NWD2Q9ULI1 1742 aa28.15■■■□□ 2.1
CACNA2D4-215ENST00000542340 PHRF1Q9P1Y6 1649 aaKnown RBP28.15■■■□□ 2.1
CACNA2D4-215ENST00000542340 NINLQ9Y2I6 1382 aa28.15■■■□□ 2.1
CACNA2D4-215ENST00000542340 CD163L1Q9NR16 1453 aa28.15■■■□□ 2.1
CACNA2D4-215ENST00000542340 HDGFL2Q7Z4V5 671 aaPredicted RBP28.14■■■□□ 2.1
CACNA2D4-215ENST00000542340 TERF2IPQ9NYB0 399 aa28.14■■■□□ 2.1
CACNA2D4-215ENST00000542340 COL14A1Q05707 1796 aaKnown RBP28.14■■■□□ 2.09
CACNA2D4-215ENST00000542340 PLCH1Q4KWH8 1693 aa28.13■■■□□ 2.09
CACNA2D4-215ENST00000542340 KIAA0232Q92628 1395 aa28.13■■■□□ 2.09
CACNA2D4-215ENST00000542340 GCP02774 474 aa28.13■■■□□ 2.09
CACNA2D4-215ENST00000542340 VPS72Q15906 364 aa28.13■■■□□ 2.09
CACNA2D4-215ENST00000542340 BTG4Q9NY30 223 aa28.13■■■□□ 2.09
CACNA2D4-215ENST00000542340 ZC3H6P61129 1189 aaKnown RBP28.12■■■□□ 2.09
CACNA2D4-215ENST00000542340 CDCA8Q53HL2 280 aa28.12■■■□□ 2.09
CACNA2D4-215ENST00000542340 RGS12O14924 1447 aa28.11■■■□□ 2.09
CACNA2D4-215ENST00000542340 CPDO75976 1380 aa28.11■■■□□ 2.09
CACNA2D4-215ENST00000542340 MON2Q7Z3U7 1717 aa28.09■■■□□ 2.09
CACNA2D4-215ENST00000542340 NRKQ7Z2Y5 1582 aa28.09■■■□□ 2.09
CACNA2D4-215ENST00000542340 PIK3C2AO00443 1686 aa28.09■■■□□ 2.09
CACNA2D4-215ENST00000542340 EIF4G2P78344 907 aaKnown RBP eCLIP28.07■■■□□ 2.08
CACNA2D4-215ENST00000542340 CHRNA2Q15822 529 aa28.07■■■□□ 2.08
CACNA2D4-215ENST00000542340 A0A1W2PP64 1363 aa28.07■■■□□ 2.08
CACNA2D4-215ENST00000542340 EDC4Q6P2E9 1401 aaKnown RBP28.06■■■□□ 2.08
CACNA2D4-215ENST00000542340 SLIT3O75094 1523 aa28.06■■■□□ 2.08
CACNA2D4-215ENST00000542340 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.05■■■□□ 2.08
CACNA2D4-215ENST00000542340 CCDC9Q9Y3X0 531 aaKnown RBP28.05■■■□□ 2.08
CACNA2D4-215ENST00000542340 NRAPQ86VF7 1730 aa28.04■■■□□ 2.08
CACNA2D4-215ENST00000542340 GLI3P10071 1580 aa28.03■■■□□ 2.08
CACNA2D4-215ENST00000542340 USP31Q70CQ4 1352 aa28.03■■■□□ 2.08
CACNA2D4-215ENST00000542340 KCNH5Q8NCM2 988 aa28.03■■■□□ 2.08
CACNA2D4-215ENST00000542340 HSPA5P11021 654 aaKnown RBP28.01■■■□□ 2.07
CACNA2D4-215ENST00000542340 ANKRD36BQ8N2N9 1353 aa28■■■□□ 2.07
CACNA2D4-215ENST00000542340 ONECUT3O60422 494 aaPredicted RBP28■■■□□ 2.07
CACNA2D4-215ENST00000542340 NME9Q86XW9 330 aa28■■■□□ 2.07
CACNA2D4-215ENST00000542340 SPATA31A5Q5VU36 1347 aa27.98■■■□□ 2.07
CACNA2D4-215ENST00000542340 SPATA31A7Q8IWB4 1347 aa27.98■■■□□ 2.07
CACNA2D4-215ENST00000542340 ZRANB1Q9UGI0 708 aa27.98■■■□□ 2.07
CACNA2D4-215ENST00000542340 EVA1CP58658 441 aa27.97■■■□□ 2.07
CACNA2D4-215ENST00000542340 AATKQ6ZMQ8 1374 aa27.97■■■□□ 2.07
CACNA2D4-215ENST00000542340 CAMTA1Q9Y6Y1 1673 aa27.97■■■□□ 2.07
CACNA2D4-215ENST00000542340 STRN4Q9NRL3 753 aa27.96■■■□□ 2.07
CACNA2D4-215ENST00000542340 LMO7Q8WWI1 1683 aa27.96■■■□□ 2.07
CACNA2D4-215ENST00000542340 ARHGEF25Q86VW2 580 aa27.95■■■□□ 2.06
CACNA2D4-215ENST00000542340 SEPT12Q8IYM1 358 aa27.94■■■□□ 2.06
CACNA2D4-215ENST00000542340 USP54Q70EL1 1684 aa27.94■■■□□ 2.06
CACNA2D4-215ENST00000542340 ZBTB7CA1YPR0 619 aa27.93■■■□□ 2.06
CACNA2D4-215ENST00000542340 UPF1Q92900 1129 aaKnown RBP eCLIP27.93■■■□□ 2.06
CACNA2D4-215ENST00000542340 SOX12O15370 315 aa27.92■■■□□ 2.06
CACNA2D4-215ENST00000542340 NFAT5O94916 1531 aa27.92■■■□□ 2.06
CACNA2D4-215ENST00000542340 SPATA31A1Q5TZJ5 1347 aa27.92■■■□□ 2.06
CACNA2D4-215ENST00000542340 FAM98CQ17RN3 349 aaKnown RBP27.91■■■□□ 2.06
CACNA2D4-215ENST00000542340 LARP1Q6PKG0 1096 aaKnown RBP27.89■■■□□ 2.06
CACNA2D4-215ENST00000542340 OVOS2A0A0J9YW53 1432 aa27.89■■■□□ 2.06
CACNA2D4-215ENST00000542340 OVOS2Q6IE36 1432 aa27.89■■■□□ 2.06
CACNA2D4-215ENST00000542340 COL5A2P05997 1499 aaPredicted RBP27.89■■■□□ 2.05
CACNA2D4-215ENST00000542340 AXIN2Q9Y2T1 843 aa27.88■■■□□ 2.05
CACNA2D4-215ENST00000542340 COG3Q96JB2 828 aa27.87■■■□□ 2.05
CACNA2D4-215ENST00000542340 COL18A1P39060 1754 aa27.86■■■□□ 2.05
CACNA2D4-215ENST00000542340 MYOM1P52179 1685 aa27.86■■■□□ 2.05
CACNA2D4-215ENST00000542340 A0A0G2JS52 829 aa27.85■■■□□ 2.05
CACNA2D4-215ENST00000542340 MYT1Q01538 1121 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms