RNA–Protein interactions for RNA: ENST00000541669.5

LDHC-207, Transcript of lactate dehydrogenase C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHC, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-207ENST00000541669 ALS2Q96Q42 1657 aa13.33□□□□□ -0.28
LDHC-207ENST00000541669 MARF1Q9Y4F3 1742 aaKnown RBP13.32□□□□□ -0.28
LDHC-207ENST00000541669 NPC1L1Q9UHC9 1359 aa13.32□□□□□ -0.28
LDHC-207ENST00000541669 TOM1O60784 492 aa13.32□□□□□ -0.28
LDHC-207ENST00000541669 CGNL1Q0VF96 1302 aa13.32□□□□□ -0.28
LDHC-207ENST00000541669 AHDC1Q5TGY3 1603 aaPredicted RBP13.31□□□□□ -0.28
LDHC-207ENST00000541669 NSD2O96028 1365 aa13.31□□□□□ -0.28
LDHC-207ENST00000541669 NPHP3Q7Z494 1330 aa13.31□□□□□ -0.28
LDHC-207ENST00000541669 FOXO3O43524 673 aa13.31□□□□□ -0.28
LDHC-207ENST00000541669 AMER1Q5JTC6 1135 aaPredicted RBP13.31□□□□□ -0.28
LDHC-207ENST00000541669 PXDNQ92626 1479 aa13.31□□□□□ -0.28
LDHC-207ENST00000541669 MAP2P11137 1827 aaKnown RBP13.31□□□□□ -0.28
LDHC-207ENST00000541669 PSME1Q06323 249 aa13.3□□□□□ -0.28
LDHC-207ENST00000541669 PHLPP1O60346 1717 aa13.3□□□□□ -0.28
LDHC-207ENST00000541669 TTC21BQ7Z4L5 1316 aa13.3□□□□□ -0.28
LDHC-207ENST00000541669 TTC21AQ8NDW8 1320 aa13.3□□□□□ -0.28
LDHC-207ENST00000541669 UBAP1LF5GYI3 381 aa13.29□□□□□ -0.28
LDHC-207ENST00000541669 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.29□□□□□ -0.28
LDHC-207ENST00000541669 ANP32CO43423 234 aa13.27□□□□□ -0.28
LDHC-207ENST00000541669 KRT28Q7Z3Y7 464 aa13.27□□□□□ -0.28
LDHC-207ENST00000541669 SBNO1A3KN83 1393 aa13.27□□□□□ -0.29
LDHC-207ENST00000541669 FYB1O15117 783 aa13.27□□□□□ -0.29
LDHC-207ENST00000541669 CC2D1BQ5T0F9 858 aaKnown RBP13.27□□□□□ -0.29
LDHC-207ENST00000541669 PARD3Q8TEW0 1356 aa13.26□□□□□ -0.29
LDHC-207ENST00000541669 XPCQ01831 940 aaPredicted RBP13.26□□□□□ -0.29
LDHC-207ENST00000541669 DDX17Q92841 729 aaKnown RBP13.26□□□□□ -0.29
LDHC-207ENST00000541669 PRKRIP1Q9H875 184 aaPredicted RBP13.26□□□□□ -0.29
LDHC-207ENST00000541669 CRYBG1Q9Y4K1 1723 aa13.26□□□□□ -0.29
LDHC-207ENST00000541669 SOS2Q07890 1332 aaPredicted RBP13.26□□□□□ -0.29
LDHC-207ENST00000541669 OVOS2A0A0J9YW53 1432 aa13.26□□□□□ -0.29
LDHC-207ENST00000541669 TNS3Q68CZ2 1445 aa13.26□□□□□ -0.29
LDHC-207ENST00000541669 OVOS2Q6IE36 1432 aa13.26□□□□□ -0.29
LDHC-207ENST00000541669 COL16A1Q07092 1604 aaPredicted RBP13.25□□□□□ -0.29
LDHC-207ENST00000541669 PAK3O75914 559 aaPredicted RBP13.25□□□□□ -0.29
LDHC-207ENST00000541669 NME9Q86XW9 330 aa13.25□□□□□ -0.29
LDHC-207ENST00000541669 RALBP1Q15311 655 aa13.25□□□□□ -0.29
LDHC-207ENST00000541669 USP31Q70CQ4 1352 aa13.25□□□□□ -0.29
LDHC-207ENST00000541669 LTN1O94822 1766 aa13.24□□□□□ -0.29
LDHC-207ENST00000541669 PIP4K2BP78356 416 aa13.24□□□□□ -0.29
LDHC-207ENST00000541669 CNGB1Q14028 1251 aaPredicted RBP13.24□□□□□ -0.29
LDHC-207ENST00000541669 GGNBP2Q9H3C7 697 aa13.24□□□□□ -0.29
LDHC-207ENST00000541669 ABCA3Q99758 1704 aa13.24□□□□□ -0.29
LDHC-207ENST00000541669 PHRF1Q9P1Y6 1649 aaKnown RBP13.24□□□□□ -0.29
LDHC-207ENST00000541669 ABTB2Q8N961 1025 aa13.23□□□□□ -0.29
LDHC-207ENST00000541669 MED1Q15648 1581 aaPredicted RBP13.23□□□□□ -0.29
LDHC-207ENST00000541669 COG3Q96JB2 828 aa13.23□□□□□ -0.29
LDHC-207ENST00000541669 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
LDHC-207ENST00000541669 ARHGEF10O15013 1369 aa13.22□□□□□ -0.29
LDHC-207ENST00000541669 MORC1Q86VD1 984 aa13.22□□□□□ -0.29
LDHC-207ENST00000541669 SPATA31A3Q5VYP0 1347 aa13.22□□□□□ -0.29
LDHC-207ENST00000541669 COL22A1Q8NFW1 1626 aaPredicted RBP13.22□□□□□ -0.29
LDHC-207ENST00000541669 SLIT3O75094 1523 aa13.21□□□□□ -0.29
LDHC-207ENST00000541669 NLRP6P59044 892 aa13.21□□□□□ -0.29
LDHC-207ENST00000541669 ZRANB1Q9UGI0 708 aa13.21□□□□□ -0.29
LDHC-207ENST00000541669 SHPRHQ149N8 1683 aa13.2□□□□□ -0.3
LDHC-207ENST00000541669 NLRP13Q86W25 1043 aa13.2□□□□□ -0.3
LDHC-207ENST00000541669 MYBBP1AQ9BQG0 1328 aaKnown RBP13.2□□□□□ -0.3
LDHC-207ENST00000541669 LMOD2Q6P5Q4 547 aa13.19□□□□□ -0.3
LDHC-207ENST00000541669 MIER1Q8N108 512 aa13.19□□□□□ -0.3
LDHC-207ENST00000541669 NFAT5O94916 1531 aa13.19□□□□□ -0.3
LDHC-207ENST00000541669 NUTM2GQ5VZR2 741 aa13.18□□□□□ -0.3
LDHC-207ENST00000541669 LRRC59Q96AG4 307 aaKnown RBP13.18□□□□□ -0.3
LDHC-207ENST00000541669 USP19O94966 1318 aa13.18□□□□□ -0.3
LDHC-207ENST00000541669 AATKQ6ZMQ8 1374 aa13.18□□□□□ -0.3
LDHC-207ENST00000541669 PPP2R1AP30153 589 aa13.17□□□□□ -0.3
LDHC-207ENST00000541669 TNNT2P45379 298 aaPredicted RBP13.17□□□□□ -0.3
LDHC-207ENST00000541669 RGPD5Q99666 1765 aa13.17□□□□□ -0.3
LDHC-207ENST00000541669 PEAK1Q9H792 1746 aa13.16□□□□□ -0.3
LDHC-207ENST00000541669 SMG6Q86US8 1419 aaKnown RBP13.16□□□□□ -0.3
LDHC-207ENST00000541669 KCNH5Q8NCM2 988 aa13.16□□□□□ -0.3
LDHC-207ENST00000541669 CCER2I3L3R5 266 aa13.15□□□□□ -0.3
LDHC-207ENST00000541669 PNPLA6Q8IY17 1366 aa13.14□□□□□ -0.31
LDHC-207ENST00000541669 GCP02774 474 aa13.13□□□□□ -0.31
LDHC-207ENST00000541669 COL18A1P39060 1754 aa13.13□□□□□ -0.31
LDHC-207ENST00000541669 CDK12Q9NYV4 1490 aaPredicted RBP13.13□□□□□ -0.31
LDHC-207ENST00000541669 SOX12O15370 315 aa13.13□□□□□ -0.31
LDHC-207ENST00000541669 FBLN1P23142 703 aa13.12□□□□□ -0.31
LDHC-207ENST00000541669 POLKQ9UBT6 870 aa13.12□□□□□ -0.31
LDHC-207ENST00000541669 KIF24Q5T7B8 1368 aa13.12□□□□□ -0.31
LDHC-207ENST00000541669 ABCC6O95255 1503 aa13.12□□□□□ -0.31
LDHC-207ENST00000541669 MTHFSP49914 203 aa13.12□□□□□ -0.31
LDHC-207ENST00000541669 RRS1Q15050 365 aaKnown RBP13.12□□□□□ -0.31
LDHC-207ENST00000541669 CABLES1Q8TDN4 633 aa13.11□□□□□ -0.31
LDHC-207ENST00000541669 RTL1A6NKG5 1358 aa13.11□□□□□ -0.31
LDHC-207ENST00000541669 JCADQ9P266 1359 aa13.11□□□□□ -0.31
LDHC-207ENST00000541669 MAP3K19Q56UN5 1328 aa13.11□□□□□ -0.31
LDHC-207ENST00000541669 PLEKHG5O94827 1062 aa13.1□□□□□ -0.31
LDHC-207ENST00000541669 EMILIN1Q9Y6C2 1016 aa13.1□□□□□ -0.31
LDHC-207ENST00000541669 COL3A1P02461 1466 aaPredicted RBP13.1□□□□□ -0.31
LDHC-207ENST00000541669 HSPA1LP34931 641 aa13.1□□□□□ -0.31
LDHC-207ENST00000541669 MRS2Q9HD23 443 aa13.1□□□□□ -0.31
LDHC-207ENST00000541669 CPDO75976 1380 aa13.1□□□□□ -0.31
LDHC-207ENST00000541669 INSRP06213 1382 aa13.1□□□□□ -0.31
LDHC-207ENST00000541669 FLT4P35916 1363 aa13.1□□□□□ -0.31
LDHC-207ENST00000541669 RGPD2P0DJD1 1756 aa13.09□□□□□ -0.31
LDHC-207ENST00000541669 COL14A1Q05707 1796 aaKnown RBP13.09□□□□□ -0.31
LDHC-207ENST00000541669 LMO7Q8WWI1 1683 aa13.09□□□□□ -0.31
LDHC-207ENST00000541669 FAM208AQ9UK61 1670 aaKnown RBP13.09□□□□□ -0.31
LDHC-207ENST00000541669 PPM1GO15355 546 aaPredicted RBP13.08□□□□□ -0.31
LDHC-207ENST00000541669 HAP1P54257 671 aaPredicted RBP13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms