RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 DCAF11Q8TEB1 546 aa19.26■□□□□ 0.67
SCARB1-207ENST00000541661 KDM2AQ9Y2K7 1162 aa19.25■□□□□ 0.67
SCARB1-207ENST00000541661 SPATA31A5Q5VU36 1347 aa19.24■□□□□ 0.67
SCARB1-207ENST00000541661 SPATA31A7Q8IWB4 1347 aa19.24■□□□□ 0.67
SCARB1-207ENST00000541661 LRP5O75197 1615 aa19.23■□□□□ 0.67
SCARB1-207ENST00000541661 NGDNQ8NEJ9 315 aaKnown RBP19.23■□□□□ 0.67
SCARB1-207ENST00000541661 ITSN1Q15811 1721 aa19.22■□□□□ 0.67
SCARB1-207ENST00000541661 ARHGEF28Q8N1W1 1705 aaKnown RBP19.22■□□□□ 0.67
SCARB1-207ENST00000541661 A0A0G2JS52 829 aa19.22■□□□□ 0.67
SCARB1-207ENST00000541661 BAG6P46379 1132 aa19.22■□□□□ 0.67
SCARB1-207ENST00000541661 MYT1Q01538 1121 aa19.22■□□□□ 0.67
SCARB1-207ENST00000541661 RGPD1P0DJD0 1748 aa19.22■□□□□ 0.67
SCARB1-207ENST00000541661 THSD7AQ9UPZ6 1657 aa19.2■□□□□ 0.66
SCARB1-207ENST00000541661 HRCP23327 699 aa19.2■□□□□ 0.66
SCARB1-207ENST00000541661 PAK3O75914 559 aaPredicted RBP19.19■□□□□ 0.66
SCARB1-207ENST00000541661 NUDT16Q96DE0 195 aaKnown RBP19.19■□□□□ 0.66
SCARB1-207ENST00000541661 ATP7BP35670 1465 aa19.19■□□□□ 0.66
SCARB1-207ENST00000541661 PRDM11Q9NQV5 511 aa19.18■□□□□ 0.66
SCARB1-207ENST00000541661 PHRF1Q9P1Y6 1649 aaKnown RBP19.17■□□□□ 0.66
SCARB1-207ENST00000541661 DISP2A7MBM2 1401 aa19.17■□□□□ 0.66
SCARB1-207ENST00000541661 SPATA31A1Q5TZJ5 1347 aa19.16■□□□□ 0.66
SCARB1-207ENST00000541661 TNS1Q9HBL0 1735 aaKnown RBP19.15■□□□□ 0.66
SCARB1-207ENST00000541661 EN1Q05925 392 aaPredicted RBP19.15■□□□□ 0.66
SCARB1-207ENST00000541661 FAM182BQ5T319 152 aa19.15■□□□□ 0.66
SCARB1-207ENST00000541661 POLR3AO14802 1390 aaPredicted RBP19.15■□□□□ 0.66
SCARB1-207ENST00000541661 KIAA0232Q92628 1395 aa19.15■□□□□ 0.66
SCARB1-207ENST00000541661 TOPAZ1Q8N9V7 1692 aa19.14■□□□□ 0.66
SCARB1-207ENST00000541661 PSDA5PKW4 1024 aaPredicted RBP19.14■□□□□ 0.65
SCARB1-207ENST00000541661 CDK19Q9BWU1 502 aa19.14■□□□□ 0.65
SCARB1-207ENST00000541661 KIAA1210Q9ULL0 1709 aa19.13■□□□□ 0.65
SCARB1-207ENST00000541661 ACEP12821 1306 aa19.11■□□□□ 0.65
SCARB1-207ENST00000541661 PLEKHG3A1L390 1219 aa19.11■□□□□ 0.65
SCARB1-207ENST00000541661 CHRNA2Q15822 529 aa19.11■□□□□ 0.65
SCARB1-207ENST00000541661 NBPF8Q3BBV2 869 aa19.11■□□□□ 0.65
SCARB1-207ENST00000541661 CCDC61Q9Y6R9 512 aa19.11■□□□□ 0.65
SCARB1-207ENST00000541661 ZC3H6P61129 1189 aaKnown RBP19.1■□□□□ 0.65
SCARB1-207ENST00000541661 FAM196AQ6ZSG2 479 aa19.1■□□□□ 0.65
SCARB1-207ENST00000541661 NUTM2GQ5VZR2 741 aa19.08■□□□□ 0.64
SCARB1-207ENST00000541661 BARGINQ6ZT62 677 aa19.08■□□□□ 0.64
SCARB1-207ENST00000541661 CAMKK2Q96RR4 588 aa19.08■□□□□ 0.64
SCARB1-207ENST00000541661 STRN4Q9NRL3 753 aa19.08■□□□□ 0.64
SCARB1-207ENST00000541661 NRKQ7Z2Y5 1582 aa19.07■□□□□ 0.64
SCARB1-207ENST00000541661 EZH2Q15910 746 aaKnown RBP19.07■□□□□ 0.64
SCARB1-207ENST00000541661 SSH2Q76I76 1423 aa19.07■□□□□ 0.64
SCARB1-207ENST00000541661 LMO7Q8WWI1 1683 aa19.06■□□□□ 0.64
SCARB1-207ENST00000541661 CAMTA1Q9Y6Y1 1673 aa19.06■□□□□ 0.64
SCARB1-207ENST00000541661 R3HDM1Q15032 1099 aaKnown RBP19.06■□□□□ 0.64
SCARB1-207ENST00000541661 CPDO75976 1380 aa19.06■□□□□ 0.64
SCARB1-207ENST00000541661 USP19O94966 1318 aa19.05■□□□□ 0.64
SCARB1-207ENST00000541661 TRIM37O94972 964 aa19.05■□□□□ 0.64
SCARB1-207ENST00000541661 EVA1CP58658 441 aa19.05■□□□□ 0.64
SCARB1-207ENST00000541661 ABTB2Q8N961 1025 aa19.05■□□□□ 0.64
SCARB1-207ENST00000541661 PARD3Q8TEW0 1356 aa19.05■□□□□ 0.64
SCARB1-207ENST00000541661 NBPF1Q3BBV0 1214 aa19.03■□□□□ 0.64
SCARB1-207ENST00000541661 RREB1Q92766 1687 aa19.02■□□□□ 0.64
SCARB1-207ENST00000541661 APBA3O96018 575 aa19.02■□□□□ 0.64
SCARB1-207ENST00000541661 PDE3BQ13370 1112 aa19.02■□□□□ 0.64
SCARB1-207ENST00000541661 LARP1Q6PKG0 1096 aaKnown RBP19.02■□□□□ 0.64
SCARB1-207ENST00000541661 TCP11L2Q8N4U5 519 aa19.02■□□□□ 0.64
SCARB1-207ENST00000541661 USP35Q9P2H5 1018 aa19.02■□□□□ 0.64
SCARB1-207ENST00000541661 THRAP3Q9Y2W1 955 aaKnown RBP19.02■□□□□ 0.64
SCARB1-207ENST00000541661 BRD4O60885 1362 aaPredicted RBP19.02■□□□□ 0.64
SCARB1-207ENST00000541661 GCP02774 474 aa19.01■□□□□ 0.63
SCARB1-207ENST00000541661 NLRP13Q86W25 1043 aa19.01■□□□□ 0.63
SCARB1-207ENST00000541661 PPIP5K1Q6PFW1 1433 aa19■□□□□ 0.63
SCARB1-207ENST00000541661 PARP4Q9UKK3 1724 aaKnown RBP18.99■□□□□ 0.63
SCARB1-207ENST00000541661 CENPJQ9HC77 1338 aaPredicted RBP18.99■□□□□ 0.63
SCARB1-207ENST00000541661 SRPK2P78362 688 aaKnown RBP18.98■□□□□ 0.63
SCARB1-207ENST00000541661 COL5A2P05997 1499 aaPredicted RBP18.97■□□□□ 0.63
SCARB1-207ENST00000541661 NUP188Q5SRE5 1749 aa18.97■□□□□ 0.63
SCARB1-207ENST00000541661 CABP2Q9NPB3 220 aa18.97■□□□□ 0.63
SCARB1-207ENST00000541661 C11orf95C9JLR9 678 aaPredicted RBP18.96■□□□□ 0.63
SCARB1-207ENST00000541661 QRICH2Q9H0J4 1663 aa18.95■□□□□ 0.62
SCARB1-207ENST00000541661 CRB1P82279 1406 aa18.94■□□□□ 0.62
SCARB1-207ENST00000541661 NBPF14Q5TI25 921 aa18.94■□□□□ 0.62
SCARB1-207ENST00000541661 SLIT3O75094 1523 aa18.94■□□□□ 0.62
SCARB1-207ENST00000541661 USP6P35125 1406 aa18.93■□□□□ 0.62
SCARB1-207ENST00000541661 CABP1Q9NZU7 370 aa18.93■□□□□ 0.62
SCARB1-207ENST00000541661 PEAK1Q9H792 1746 aa18.93■□□□□ 0.62
SCARB1-207ENST00000541661 AATKQ6ZMQ8 1374 aa18.93■□□□□ 0.62
SCARB1-207ENST00000541661 COL18A1P39060 1754 aa18.91■□□□□ 0.62
SCARB1-207ENST00000541661 NLRP6P59044 892 aa18.91■□□□□ 0.62
SCARB1-207ENST00000541661 SBF2Q86WG5 1849 aa18.9■□□□□ 0.62
SCARB1-207ENST00000541661 RGPD3A6NKT7 1758 aaPredicted RBP18.9■□□□□ 0.62
SCARB1-207ENST00000541661 RGPD4Q7Z3J3 1758 aa18.9■□□□□ 0.62
SCARB1-207ENST00000541661 PIK3C2AO00443 1686 aa18.89■□□□□ 0.61
SCARB1-207ENST00000541661 OVOS2A0A0G2JMS6 1433 aa18.89■□□□□ 0.61
SCARB1-207ENST00000541661 OVOS2A0A0J9YW53 1432 aa18.89■□□□□ 0.61
SCARB1-207ENST00000541661 OVOS2Q6IE36 1432 aa18.89■□□□□ 0.61
SCARB1-207ENST00000541661 LRRC37A3O60309 1634 aa18.89■□□□□ 0.61
SCARB1-207ENST00000541661 PLSCR1O15162 318 aa18.87■□□□□ 0.61
SCARB1-207ENST00000541661 EVC2Q86UK5 1308 aa18.87■□□□□ 0.61
SCARB1-207ENST00000541661 WNK3Q9BYP7 1800 aa18.86■□□□□ 0.61
SCARB1-207ENST00000541661 DDB1Q16531 1140 aa18.86■□□□□ 0.61
SCARB1-207ENST00000541661 L3MBTL2Q969R5 705 aa18.86■□□□□ 0.61
SCARB1-207ENST00000541661 ZNF692Q9BU19 519 aaPredicted RBP18.86■□□□□ 0.61
SCARB1-207ENST00000541661 TRPM1Q7Z4N2 1603 aa18.85■□□□□ 0.61
SCARB1-207ENST00000541661 WDR17Q8IZU2 1322 aa18.85■□□□□ 0.61
SCARB1-207ENST00000541661 ZBTB7CA1YPR0 619 aa18.85■□□□□ 0.61
SCARB1-207ENST00000541661 TOM1L2Q6ZVM7 507 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms