RNA–Protein interactions for RNA: ENST00000541614.5

LRTOMT-218, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-218ENST00000541614 NWD2Q9ULI1 1742 aa8.89□□□□□ -0.99
LRTOMT-218ENST00000541614 PLCH1Q4KWH8 1693 aa8.89□□□□□ -0.99
LRTOMT-218ENST00000541614 FNBP4Q8N3X1 1017 aaPredicted RBP8.89□□□□□ -0.99
LRTOMT-218ENST00000541614 NGLY1Q96IV0 654 aa8.89□□□□□ -0.99
LRTOMT-218ENST00000541614 SLIT2O94813 1529 aa8.89□□□□□ -0.99
LRTOMT-218ENST00000541614 CDK12Q9NYV4 1490 aaPredicted RBP8.89□□□□□ -0.99
LRTOMT-218ENST00000541614 ATAD2Q6PL18 1390 aa8.88□□□□□ -0.99
LRTOMT-218ENST00000541614 LMOD2Q6P5Q4 547 aa8.88□□□□□ -0.99
LRTOMT-218ENST00000541614 CCER1Q8TC90 406 aaPredicted RBP8.88□□□□□ -0.99
LRTOMT-218ENST00000541614 MON2Q7Z3U7 1717 aa8.88□□□□□ -0.99
LRTOMT-218ENST00000541614 ATRNO75882 1429 aa8.88□□□□□ -0.99
LRTOMT-218ENST00000541614 USP6P35125 1406 aa8.88□□□□□ -0.99
LRTOMT-218ENST00000541614 NRKQ7Z2Y5 1582 aa8.87□□□□□ -0.99
LRTOMT-218ENST00000541614 COL14A1Q05707 1796 aaKnown RBP8.87□□□□□ -0.99
LRTOMT-218ENST00000541614 PAK3O75914 559 aaPredicted RBP8.87□□□□□ -0.99
LRTOMT-218ENST00000541614 HAP1P54257 671 aaPredicted RBP8.87□□□□□ -0.99
LRTOMT-218ENST00000541614 CABLES1Q8TDN4 633 aa8.87□□□□□ -0.99
LRTOMT-218ENST00000541614 CABP1Q9NZU7 370 aa8.87□□□□□ -0.99
LRTOMT-218ENST00000541614 USP21Q9UK80 565 aa8.87□□□□□ -0.99
LRTOMT-218ENST00000541614 BCL9LQ86UU0 1499 aa8.87□□□□□ -0.99
LRTOMT-218ENST00000541614 NRAPQ86VF7 1730 aa8.86□□□□□ -0.99
LRTOMT-218ENST00000541614 RXRBP28702 533 aa8.86□□□□□ -0.99
LRTOMT-218ENST00000541614 SSH2Q76I76 1423 aa8.86□□□□□ -0.99
LRTOMT-218ENST00000541614 USP47Q96K76 1375 aa8.86□□□□□ -0.99
LRTOMT-218ENST00000541614 PIK3C2AO00443 1686 aa8.85□□□□□ -0.99
LRTOMT-218ENST00000541614 ST20-MTHFSA0A0A6YYL1 179 aa8.85□□□□□ -0.99
LRTOMT-218ENST00000541614 SLC24A1O60721 1099 aa8.85□□□□□ -0.99
LRTOMT-218ENST00000541614 RBM6P78332 1123 aaKnown RBP8.85□□□□□ -0.99
LRTOMT-218ENST00000541614 PUS7Q96PZ0 661 aaKnown RBP8.85□□□□□ -0.99
LRTOMT-218ENST00000541614 TESK2Q96S53 571 aa8.85□□□□□ -0.99
LRTOMT-218ENST00000541614 QTRT2Q9H974 415 aaKnown RBP8.85□□□□□ -0.99
LRTOMT-218ENST00000541614 TRPC5Q9UL62 973 aaPredicted RBP8.85□□□□□ -0.99
LRTOMT-218ENST00000541614 CPSF1Q10570 1443 aaKnown RBP8.85□□□□□ -0.99
LRTOMT-218ENST00000541614 USP19O94966 1318 aa8.84□□□□□ -0.99
LRTOMT-218ENST00000541614 RGS12O14924 1447 aa8.84□□□□□ -0.99
LRTOMT-218ENST00000541614 PLEKHG5O94827 1062 aa8.84□□□□□ -0.99
LRTOMT-218ENST00000541614 UNC5CLQ8IV45 518 aa8.84□□□□□ -0.99
LRTOMT-218ENST00000541614 ZNF692Q9BU19 519 aaPredicted RBP8.84□□□□□ -0.99
LRTOMT-218ENST00000541614 USP54Q70EL1 1684 aa8.84□□□□□ -0.99
LRTOMT-218ENST00000541614 SLIT3O75094 1523 aa8.84□□□□□ -0.99
LRTOMT-218ENST00000541614 CD163L1Q9NR16 1453 aa8.83□□□□□ -1
LRTOMT-218ENST00000541614 GLI3P10071 1580 aa8.83□□□□□ -1
LRTOMT-218ENST00000541614 ABTB2Q8N961 1025 aa8.83□□□□□ -1
LRTOMT-218ENST00000541614 NINLQ9Y2I6 1382 aa8.83□□□□□ -1
LRTOMT-218ENST00000541614 FAM83GA6ND36 823 aa8.82□□□□□ -1
LRTOMT-218ENST00000541614 NUTM2GQ5VZR2 741 aa8.82□□□□□ -1
LRTOMT-218ENST00000541614 NLRP13Q86W25 1043 aa8.82□□□□□ -1
LRTOMT-218ENST00000541614 CPDO75976 1380 aa8.82□□□□□ -1
LRTOMT-218ENST00000541614 KTN1Q86UP2 1357 aaKnown RBP8.82□□□□□ -1
LRTOMT-218ENST00000541614 KIAA0232Q92628 1395 aa8.82□□□□□ -1
LRTOMT-218ENST00000541614 LMO7Q8WWI1 1683 aa8.81□□□□□ -1
LRTOMT-218ENST00000541614 TTC21BQ7Z4L5 1316 aa8.81□□□□□ -1
LRTOMT-218ENST00000541614 TTC21AQ8NDW8 1320 aa8.81□□□□□ -1
LRTOMT-218ENST00000541614 VPS72Q15906 364 aa8.81□□□□□ -1
LRTOMT-218ENST00000541614 GJD4Q96KN9 370 aaPredicted RBP8.81□□□□□ -1
LRTOMT-218ENST00000541614 PRDM11Q9NQV5 511 aa8.81□□□□□ -1
LRTOMT-218ENST00000541614 TMF1P82094 1093 aa8.8□□□□□ -1
LRTOMT-218ENST00000541614 TMC1Q8TDI8 760 aa8.8□□□□□ -1
LRTOMT-218ENST00000541614 BTG4Q9NY30 223 aa8.8□□□□□ -1
LRTOMT-218ENST00000541614 A0A1W2PP64 1363 aa8.8□□□□□ -1
LRTOMT-218ENST00000541614 EDC4Q6P2E9 1401 aaKnown RBP8.8□□□□□ -1
LRTOMT-218ENST00000541614 MYOM1P52179 1685 aa8.79□□□□□ -1
LRTOMT-218ENST00000541614 USP31Q70CQ4 1352 aa8.79□□□□□ -1
LRTOMT-218ENST00000541614 GCP02774 474 aa8.79□□□□□ -1
LRTOMT-218ENST00000541614 NLRP6P59044 892 aa8.79□□□□□ -1
LRTOMT-218ENST00000541614 ZC3H6P61129 1189 aaKnown RBP8.79□□□□□ -1
LRTOMT-218ENST00000541614 HDGFL2Q7Z4V5 671 aaPredicted RBP8.79□□□□□ -1
LRTOMT-218ENST00000541614 SLC12A5Q9H2X9 1139 aa8.79□□□□□ -1
LRTOMT-218ENST00000541614 TERF2IPQ9NYB0 399 aa8.79□□□□□ -1
LRTOMT-218ENST00000541614 NFAT5O94916 1531 aa8.79□□□□□ -1
LRTOMT-218ENST00000541614 COL18A1P39060 1754 aa8.78□□□□□ -1
LRTOMT-218ENST00000541614 CAMTA1Q9Y6Y1 1673 aa8.78□□□□□ -1
LRTOMT-218ENST00000541614 BRWD3Q6RI45 1802 aa8.78□□□□□ -1
LRTOMT-218ENST00000541614 CDCA8Q53HL2 280 aa8.78□□□□□ -1
LRTOMT-218ENST00000541614 ABCC6O95255 1503 aa8.78□□□□□ -1
LRTOMT-218ENST00000541614 EP400Q96L91 3159 aa8.77□□□□□ -1
LRTOMT-218ENST00000541614 ANKRD36BQ8N2N9 1353 aa8.77□□□□□ -1.01
LRTOMT-218ENST00000541614 CHRNA2Q15822 529 aa8.77□□□□□ -1.01
LRTOMT-218ENST00000541614 KCNH5Q8NCM2 988 aa8.77□□□□□ -1.01
LRTOMT-218ENST00000541614 THSD7AQ9UPZ6 1657 aa8.77□□□□□ -1.01
LRTOMT-218ENST00000541614 OVOS2A0A0J9YW53 1432 aa8.77□□□□□ -1.01
LRTOMT-218ENST00000541614 OVOS2Q6IE36 1432 aa8.77□□□□□ -1.01
LRTOMT-218ENST00000541614 COL5A2P05997 1499 aaPredicted RBP8.77□□□□□ -1.01
LRTOMT-218ENST00000541614 LTN1O94822 1766 aa8.76□□□□□ -1.01
LRTOMT-218ENST00000541614 AATKQ6ZMQ8 1374 aa8.76□□□□□ -1.01
LRTOMT-218ENST00000541614 ONECUT3O60422 494 aaPredicted RBP8.76□□□□□ -1.01
LRTOMT-218ENST00000541614 EIF4G2P78344 907 aaKnown RBP eCLIP8.76□□□□□ -1.01
LRTOMT-218ENST00000541614 CCDC9Q9Y3X0 531 aaKnown RBP8.76□□□□□ -1.01
LRTOMT-218ENST00000541614 SPATA31A5Q5VU36 1347 aa8.76□□□□□ -1.01
LRTOMT-218ENST00000541614 SPATA31A7Q8IWB4 1347 aa8.76□□□□□ -1.01
LRTOMT-218ENST00000541614 KIF20BQ96Q89 1820 aa8.75□□□□□ -1.01
LRTOMT-218ENST00000541614 NME9Q86XW9 330 aa8.75□□□□□ -1.01
LRTOMT-218ENST00000541614 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.75□□□□□ -1.01
LRTOMT-218ENST00000541614 UPF1Q92900 1129 aaKnown RBP eCLIP8.75□□□□□ -1.01
LRTOMT-218ENST00000541614 RGPD5Q99666 1765 aa8.75□□□□□ -1.01
LRTOMT-218ENST00000541614 SPATA31A1Q5TZJ5 1347 aa8.75□□□□□ -1.01
LRTOMT-218ENST00000541614 HSPA5P11021 654 aaKnown RBP8.74□□□□□ -1.01
LRTOMT-218ENST00000541614 ARHGEF25Q86VW2 580 aa8.74□□□□□ -1.01
LRTOMT-218ENST00000541614 SEPT12Q8IYM1 358 aa8.74□□□□□ -1.01
LRTOMT-218ENST00000541614 STRN4Q9NRL3 753 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms