RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 LAMC1P11047 1609 aa9.16□□□□□ -0.94
EPHA4-214ENST00000541600 SETBP1Q9Y6X0 1596 aa9.16□□□□□ -0.94
EPHA4-214ENST00000541600 DHX29Q7Z478 1369 aaKnown RBP9.16□□□□□ -0.94
EPHA4-214ENST00000541600 NEFLP07196 543 aa9.16□□□□□ -0.94
EPHA4-214ENST00000541600 MICALL2Q8IY33 904 aa9.16□□□□□ -0.94
EPHA4-214ENST00000541600 CCDC82Q8N4S0 544 aa9.16□□□□□ -0.94
EPHA4-214ENST00000541600 CLUAP1Q96AJ1 413 aa9.16□□□□□ -0.94
EPHA4-214ENST00000541600 MS4A3Q96HJ5 214 aa9.16□□□□□ -0.94
EPHA4-214ENST00000541600 PCMTD1Q96MG8 357 aaPredicted RBP9.16□□□□□ -0.94
EPHA4-214ENST00000541600 ZNF777Q9ULD5 760 aaPredicted RBP9.16□□□□□ -0.94
EPHA4-214ENST00000541600 MLH3Q9UHC1 1453 aa9.15□□□□□ -0.94
EPHA4-214ENST00000541600 GPRASP1Q5JY77 1395 aa9.15□□□□□ -0.94
EPHA4-214ENST00000541600 USP47Q96K76 1375 aa9.15□□□□□ -0.94
EPHA4-214ENST00000541600 MYO5CQ9NQX4 1742 aa9.15□□□□□ -0.94
EPHA4-214ENST00000541600 ZBTB7CA1YPR0 619 aa9.15□□□□□ -0.94
EPHA4-214ENST00000541600 MAP3K9P80192 1104 aa9.15□□□□□ -0.94
EPHA4-214ENST00000541600 IQGAP3Q86VI3 1631 aa9.15□□□□□ -0.94
EPHA4-214ENST00000541600 DUOX2Q9NRD8 1548 aa9.15□□□□□ -0.95
EPHA4-214ENST00000541600 FAM135AQ9P2D6 1515 aa9.15□□□□□ -0.95
EPHA4-214ENST00000541600 ZBED9Q6R2W3 1325 aa9.14□□□□□ -0.95
EPHA4-214ENST00000541600 TIE1P35590 1138 aa9.14□□□□□ -0.95
EPHA4-214ENST00000541600 PTGER2P43116 358 aa9.14□□□□□ -0.95
EPHA4-214ENST00000541600 EFCAB2Q5VUJ9 269 aa9.14□□□□□ -0.95
EPHA4-214ENST00000541600 DPY19L2Q6NUT2 758 aa9.14□□□□□ -0.95
EPHA4-214ENST00000541600 GIGYF2Q6Y7W6 1299 aaKnown RBP9.14□□□□□ -0.95
EPHA4-214ENST00000541600 PIP4P2Q8N4L2 257 aa9.14□□□□□ -0.95
EPHA4-214ENST00000541600 STAC3Q96MF2 364 aa9.14□□□□□ -0.95
EPHA4-214ENST00000541600 ZNF518AQ6AHZ1 1483 aa9.14□□□□□ -0.95
EPHA4-214ENST00000541600 ERBINQ96RT1 1412 aa9.14□□□□□ -0.95
EPHA4-214ENST00000541600 TTLL13PA6NNM8 815 aa9.13□□□□□ -0.95
EPHA4-214ENST00000541600 MS4A1P11836 297 aa9.13□□□□□ -0.95
EPHA4-214ENST00000541600 HNRNPMP52272 730 aaKnown RBP eCLIP9.13□□□□□ -0.95
EPHA4-214ENST00000541600 FBXO31Q5XUX0 539 aaPredicted RBP9.13□□□□□ -0.95
EPHA4-214ENST00000541600 ESF1Q9H501 851 aaKnown RBP9.13□□□□□ -0.95
EPHA4-214ENST00000541600 RTEL1-TNFRSF6BF6WH68 1400 aa9.13□□□□□ -0.95
EPHA4-214ENST00000541600 MCM6Q14566 821 aa9.12□□□□□ -0.95
EPHA4-214ENST00000541600 A2ML1A8K2U0 1454 aa9.12□□□□□ -0.95
EPHA4-214ENST00000541600 MROH2AA6NES4 1674 aa9.12□□□□□ -0.95
EPHA4-214ENST00000541600 FAM135BQ49AJ0 1406 aa9.12□□□□□ -0.95
EPHA4-214ENST00000541600 LRP6O75581 1613 aa9.12□□□□□ -0.95
EPHA4-214ENST00000541600 INSRP06213 1382 aa9.12□□□□□ -0.95
EPHA4-214ENST00000541600 WASHC2CQ9Y4E1 1318 aa9.11□□□□□ -0.95
EPHA4-214ENST00000541600 KIF3CO14782 793 aa9.11□□□□□ -0.95
EPHA4-214ENST00000541600 HNRNPUQ00839 825 aaKnown RBP eCLIP9.11□□□□□ -0.95
EPHA4-214ENST00000541600 SH3D19Q5HYK7 790 aa9.11□□□□□ -0.95
EPHA4-214ENST00000541600 CCDC9Q9Y3X0 531 aaKnown RBP9.11□□□□□ -0.95
EPHA4-214ENST00000541600 ARHGAP5Q13017 1502 aa9.1□□□□□ -0.95
EPHA4-214ENST00000541600 SYCP2Q9BX26 1530 aa9.1□□□□□ -0.95
EPHA4-214ENST00000541600 MED14O60244 1454 aa9.1□□□□□ -0.95
EPHA4-214ENST00000541600 TRPM1Q7Z4N2 1603 aa9.1□□□□□ -0.95
EPHA4-214ENST00000541600 C2orf72A6NCS6 295 aa9.1□□□□□ -0.95
EPHA4-214ENST00000541600 NECTIN2Q92692 538 aa9.1□□□□□ -0.95
EPHA4-214ENST00000541600 PRAG1Q86YV5 1406 aa9.1□□□□□ -0.95
EPHA4-214ENST00000541600 E9PCH4 1651 aa9.1□□□□□ -0.95
EPHA4-214ENST00000541600 CLTCQ00610 1675 aaKnown RBP9.1□□□□□ -0.95
EPHA4-214ENST00000541600 XIRP1Q702N8 1843 aaKnown RBP9.1□□□□□ -0.95
EPHA4-214ENST00000541600 KIDINS220Q9ULH0 1771 aa9.09□□□□□ -0.95
EPHA4-214ENST00000541600 RNF17Q9BXT8 1623 aaKnown RBP9.09□□□□□ -0.95
EPHA4-214ENST00000541600 EP400Q96L91 3159 aa9.09□□□□□ -0.95
EPHA4-214ENST00000541600 NPHP4O75161 1426 aaPredicted RBP9.09□□□□□ -0.95
EPHA4-214ENST00000541600 PTGDRQ13258 359 aa9.09□□□□□ -0.95
EPHA4-214ENST00000541600 REPIN1Q9BWE0 567 aaKnown RBP9.09□□□□□ -0.95
EPHA4-214ENST00000541600 MYT1LQ9UL68 1186 aa9.09□□□□□ -0.95
EPHA4-214ENST00000541600 ABCC1P33527 1531 aa9.09□□□□□ -0.95
EPHA4-214ENST00000541600 EIF2AK4Q9P2K8 1649 aaKnown RBP9.09□□□□□ -0.95
EPHA4-214ENST00000541600 CCDC144AA2RUR9 1427 aa9.08□□□□□ -0.96
EPHA4-214ENST00000541600 RALBP1Q15311 655 aa9.08□□□□□ -0.96
EPHA4-214ENST00000541600 CCDC184Q52MB2 194 aa9.08□□□□□ -0.96
EPHA4-214ENST00000541600 DDX12PQ92771 950 aa9.08□□□□□ -0.96
EPHA4-214ENST00000541600 TMEM121BQ9BXQ6 578 aaPredicted RBP9.08□□□□□ -0.96
EPHA4-214ENST00000541600 MRS2Q9HD23 443 aa9.08□□□□□ -0.96
EPHA4-214ENST00000541600 RNF123Q5XPI4 1314 aa9.07□□□□□ -0.96
EPHA4-214ENST00000541600 SMG6Q86US8 1419 aaKnown RBP9.07□□□□□ -0.96
EPHA4-214ENST00000541600 PRIM1P49642 420 aaKnown RBP9.07□□□□□ -0.96
EPHA4-214ENST00000541600 ANKLE2Q86XL3 938 aa9.07□□□□□ -0.96
EPHA4-214ENST00000541600 OXER1Q8TDS5 423 aa9.07□□□□□ -0.96
EPHA4-214ENST00000541600 CARD11Q9BXL7 1154 aa9.07□□□□□ -0.96
EPHA4-214ENST00000541600 BRD4O60885 1362 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-214ENST00000541600 LRPPRCP42704 1394 aaKnown RBP9.07□□□□□ -0.96
EPHA4-214ENST00000541600 PRDM15P57071 1507 aaPredicted RBP9.06□□□□□ -0.96
EPHA4-214ENST00000541600 IFFO2Q5TF58 517 aa9.06□□□□□ -0.96
EPHA4-214ENST00000541600 CHRDL2Q6WN34 429 aa9.06□□□□□ -0.96
EPHA4-214ENST00000541600 PROSER2Q86WR7 435 aaPredicted RBP9.06□□□□□ -0.96
EPHA4-214ENST00000541600 PDCD7Q8N8D1 485 aaKnown RBP9.06□□□□□ -0.96
EPHA4-214ENST00000541600 RBM33Q96EV2 1170 aaKnown RBP9.06□□□□□ -0.96
EPHA4-214ENST00000541600 TMUB1Q9BVT8 246 aa9.06□□□□□ -0.96
EPHA4-214ENST00000541600 BMP2KQ9NSY1 1161 aaPredicted RBP9.06□□□□□ -0.96
EPHA4-214ENST00000541600 TRIM35Q9UPQ4 493 aa9.06□□□□□ -0.96
EPHA4-214ENST00000541600 A2MP01023 1474 aa9.06□□□□□ -0.96
EPHA4-214ENST00000541600 DEPDC5O75140 1603 aa9.05□□□□□ -0.96
EPHA4-214ENST00000541600 FNBP4Q8N3X1 1017 aaPredicted RBP9.05□□□□□ -0.96
EPHA4-214ENST00000541600 PNISRQ8TF01 805 aaKnown RBP9.05□□□□□ -0.96
EPHA4-214ENST00000541600 PPP4R2Q9NY27 417 aa9.05□□□□□ -0.96
EPHA4-214ENST00000541600 ST20-MTHFSA0A0A6YYL1 179 aa9.04□□□□□ -0.96
EPHA4-214ENST00000541600 RXRBP28702 533 aa9.04□□□□□ -0.96
EPHA4-214ENST00000541600 SKIV2LQ15477 1246 aaKnown RBP9.04□□□□□ -0.96
EPHA4-214ENST00000541600 DCAF11Q8TEB1 546 aa9.04□□□□□ -0.96
EPHA4-214ENST00000541600 CLCN1P35523 988 aa9.03□□□□□ -0.96
EPHA4-214ENST00000541600 GGT6Q6P531 493 aa9.03□□□□□ -0.96
EPHA4-214ENST00000541600 TRAIPQ9BWF2 469 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms