RNA–Protein interactions for RNA: ENST00000541466.1

KNTC1-212, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 616 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-212ENST00000541466 TBC1D2Q9BYX2 928 aa6.36□□□□□ -1.39
KNTC1-212ENST00000541466 RSPH6AQ9H0K4 717 aa6.36□□□□□ -1.39
KNTC1-212ENST00000541466 ATP1B4Q9UN42 357 aaPredicted RBP6.36□□□□□ -1.39
KNTC1-212ENST00000541466 WASF2Q9Y6W5 498 aa6.36□□□□□ -1.39
KNTC1-212ENST00000541466 KCNMA1Q12791 1236 aa6.35□□□□□ -1.39
KNTC1-212ENST00000541466 SPIRE2Q8WWL2 714 aa6.35□□□□□ -1.39
KNTC1-212ENST00000541466 KRTAP4-8Q9BYQ9 185 aa6.35□□□□□ -1.39
KNTC1-212ENST00000541466 PCDHGC3Q9UN70 934 aa6.35□□□□□ -1.39
KNTC1-212ENST00000541466 CCNYL3P0C7X3 344 aa6.34□□□□□ -1.39
KNTC1-212ENST00000541466 NDUFV2P19404 249 aa6.34□□□□□ -1.39
KNTC1-212ENST00000541466 SH3D19Q5HYK7 790 aa6.34□□□□□ -1.39
KNTC1-212ENST00000541466 XP32Q5T750 250 aa6.34□□□□□ -1.39
KNTC1-212ENST00000541466 MOXD2PA6NHM9 499 aa6.33□□□□□ -1.4
KNTC1-212ENST00000541466 MYSM1Q5VVJ2 828 aa6.33□□□□□ -1.4
KNTC1-212ENST00000541466 IRF7Q92985 503 aa6.33□□□□□ -1.4
KNTC1-212ENST00000541466 NXF1Q9UBU9 619 aaKnown RBP6.33□□□□□ -1.4
KNTC1-212ENST00000541466 CAPN5O15484 640 aaPredicted RBP6.32□□□□□ -1.4
KNTC1-212ENST00000541466 SIAH2O43255 324 aa6.32□□□□□ -1.4
KNTC1-212ENST00000541466 CLK2P49760 499 aaKnown RBP6.32□□□□□ -1.4
KNTC1-212ENST00000541466 SH3BP2P78314 561 aa6.32□□□□□ -1.4
KNTC1-212ENST00000541466 PRR7Q8TB68 274 aa6.32□□□□□ -1.4
KNTC1-212ENST00000541466 PCMTD1Q96MG8 357 aaPredicted RBP6.32□□□□□ -1.4
KNTC1-212ENST00000541466 UNC93B1Q9H1C4 597 aa6.32□□□□□ -1.4
KNTC1-212ENST00000541466 EVA1BQ9NVM1 165 aa6.32□□□□□ -1.4
KNTC1-212ENST00000541466 POLR3EQ9NVU0 708 aa6.32□□□□□ -1.4
KNTC1-212ENST00000541466 SPDYE5A6NIY4 337 aa6.31□□□□□ -1.4
KNTC1-212ENST00000541466 KCNH2Q12809 1159 aa6.31□□□□□ -1.4
KNTC1-212ENST00000541466 MTMR2Q13614 643 aa6.31□□□□□ -1.4
KNTC1-212ENST00000541466 PTPRNQ16849 979 aa6.31□□□□□ -1.4
KNTC1-212ENST00000541466 LINC01559Q495D7 138 aa6.31□□□□□ -1.4
KNTC1-212ENST00000541466 BAP1Q92560 729 aa6.31□□□□□ -1.4
KNTC1-212ENST00000541466 GOPCQ9HD26 462 aa6.31□□□□□ -1.4
KNTC1-212ENST00000541466 CTHP32929 405 aa6.3□□□□□ -1.4
KNTC1-212ENST00000541466 SKIV2LQ15477 1246 aaKnown RBP6.3□□□□□ -1.4
KNTC1-212ENST00000541466 CSPP1Q1MSJ5 1256 aa6.3□□□□□ -1.4
KNTC1-212ENST00000541466 RSBN1LQ6PCB5 846 aaPredicted RBP6.3□□□□□ -1.4
KNTC1-212ENST00000541466 RIC3Q7Z5B4 369 aa6.3□□□□□ -1.4
KNTC1-212ENST00000541466 NPAS3Q8IXF0 933 aa6.29□□□□□ -1.4
KNTC1-212ENST00000541466 LIMD1Q9UGP4 676 aa6.29□□□□□ -1.4
KNTC1-212ENST00000541466 ERBB4Q15303 1308 aa6.28□□□□□ -1.4
KNTC1-212ENST00000541466 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.28□□□□□ -1.4
KNTC1-212ENST00000541466 SPTLC1O15269 473 aa6.28□□□□□ -1.4
KNTC1-212ENST00000541466 H3BM21 787 aa6.27□□□□□ -1.41
KNTC1-212ENST00000541466 BMP1P13497 986 aa6.27□□□□□ -1.41
KNTC1-212ENST00000541466 VARSP26640 1264 aaKnown RBP6.27□□□□□ -1.41
KNTC1-212ENST00000541466 GJA5P36382 358 aa6.27□□□□□ -1.41
KNTC1-212ENST00000541466 DESI1Q6ICB0 168 aa6.27□□□□□ -1.41
KNTC1-212ENST00000541466 TMEM151AQ8N4L1 468 aa6.27□□□□□ -1.41
KNTC1-212ENST00000541466 ZNF511Q8NB15 262 aa6.27□□□□□ -1.41
KNTC1-212ENST00000541466 NUTM2BA6NNL0 878 aaPredicted RBP6.26□□□□□ -1.41
KNTC1-212ENST00000541466 NUTM2EB1AL46 878 aaPredicted RBP6.26□□□□□ -1.41
KNTC1-212ENST00000541466 ARID5BQ14865 1188 aa6.26□□□□□ -1.41
KNTC1-212ENST00000541466 NUTM2DQ5VT03 806 aaPredicted RBP6.26□□□□□ -1.41
KNTC1-212ENST00000541466 TRIM46Q7Z4K8 759 aa6.26□□□□□ -1.41
KNTC1-212ENST00000541466 NUTM2AQ8IVF1 878 aaPredicted RBP6.26□□□□□ -1.41
KNTC1-212ENST00000541466 PROCA1Q8NCQ7 364 aaPredicted RBP6.26□□□□□ -1.41
KNTC1-212ENST00000541466 ZBTB3Q9H5J0 574 aa6.26□□□□□ -1.41
KNTC1-212ENST00000541466 TLL2Q9Y6L7 1015 aa6.26□□□□□ -1.41
KNTC1-212ENST00000541466 VEGFBP49765 207 aa6.25□□□□□ -1.41
KNTC1-212ENST00000541466 SCARF1Q14162 830 aa6.25□□□□□ -1.41
KNTC1-212ENST00000541466 AGERQ15109 404 aa6.25□□□□□ -1.41
KNTC1-212ENST00000541466 KRTAP9-2Q9BYQ4 174 aa6.25□□□□□ -1.41
KNTC1-212ENST00000541466 PCDHB15Q9Y5E8 787 aa6.25□□□□□ -1.41
KNTC1-212ENST00000541466 GDF11O95390 407 aa6.24□□□□□ -1.41
KNTC1-212ENST00000541466 WDR4P57081 412 aaKnown RBP6.24□□□□□ -1.41
KNTC1-212ENST00000541466 NNTQ13423 1086 aa6.24□□□□□ -1.41
KNTC1-212ENST00000541466 QPCTQ16769 361 aa6.24□□□□□ -1.41
KNTC1-212ENST00000541466 TUSC1Q2TAM9 212 aa6.24□□□□□ -1.41
KNTC1-212ENST00000541466 PRPF38BQ5VTL8 546 aaKnown RBP6.24□□□□□ -1.41
KNTC1-212ENST00000541466 LYPD8Q6UX82 237 aa6.24□□□□□ -1.41
KNTC1-212ENST00000541466 FAM174AQ8TBP5 190 aa6.24□□□□□ -1.41
KNTC1-212ENST00000541466 CABLES1Q8TDN4 633 aa6.24□□□□□ -1.41
KNTC1-212ENST00000541466 TSC1Q92574 1164 aa6.24□□□□□ -1.41
KNTC1-212ENST00000541466 ZFP42Q96MM3 310 aa6.24□□□□□ -1.41
KNTC1-212ENST00000541466 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.24□□□□□ -1.41
KNTC1-212ENST00000541466 HRCP23327 699 aa6.23□□□□□ -1.41
KNTC1-212ENST00000541466 RASSF7Q02833 373 aa6.23□□□□□ -1.41
KNTC1-212ENST00000541466 KRTAP9-6A0A140TA67 174 aa6.22□□□□□ -1.41
KNTC1-212ENST00000541466 CFAP99D6REC4 459 aa6.22□□□□□ -1.41
KNTC1-212ENST00000541466 LILRB3O75022 631 aa6.22□□□□□ -1.41
KNTC1-212ENST00000541466 MRPL14Q6P1L8 145 aaKnown RBP6.22□□□□□ -1.41
KNTC1-212ENST00000541466 MPNDQ8N594 471 aa6.22□□□□□ -1.41
KNTC1-212ENST00000541466 ADH1CP00326 375 aa6.21□□□□□ -1.42
KNTC1-212ENST00000541466 RFC5P40937 340 aa6.21□□□□□ -1.42
KNTC1-212ENST00000541466 FOXJ1Q92949 421 aa6.21□□□□□ -1.42
KNTC1-212ENST00000541466 PURBQ96QR8 312 aaKnown RBP6.21□□□□□ -1.42
KNTC1-212ENST00000541466 GTF3C3Q9Y5Q9 886 aa6.21□□□□□ -1.42
KNTC1-212ENST00000541466 BPHLQ86WA6 291 aaPredicted RBP6.2□□□□□ -1.42
KNTC1-212ENST00000541466 HELBQ8NG08 1087 aaPredicted RBP6.2□□□□□ -1.42
KNTC1-212ENST00000541466 MAP10Q9P2G4 905 aa6.2□□□□□ -1.42
KNTC1-212ENST00000541466 TIMP2P16035 220 aa6.19□□□□□ -1.42
KNTC1-212ENST00000541466 RTL5Q5HYW3 569 aaPredicted RBP6.19□□□□□ -1.42
KNTC1-212ENST00000541466 PPP2R2DQ66LE6 453 aa6.19□□□□□ -1.42
KNTC1-212ENST00000541466 AP1G2O75843 785 aa6.18□□□□□ -1.42
KNTC1-212ENST00000541466 UPP2O95045 317 aa6.18□□□□□ -1.42
KNTC1-212ENST00000541466 ZIC2O95409 532 aaPredicted RBP6.18□□□□□ -1.42
KNTC1-212ENST00000541466 NR5A1Q13285 461 aa6.18□□□□□ -1.42
KNTC1-212ENST00000541466 C6orf118Q5T5N4 469 aa6.18□□□□□ -1.42
KNTC1-212ENST00000541466 FBXO31Q5XUX0 539 aaPredicted RBP6.18□□□□□ -1.42
KNTC1-212ENST00000541466 ARMC2Q8NEN0 867 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms