RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 L1TD1Q5T7N2 865 aaKnown RBP7.68□□□□□ -1.18
LMO3-225ENST00000541295 ZNF280DQ6N043 979 aa7.68□□□□□ -1.18
LMO3-225ENST00000541295 FRMD4BQ9Y2L6 1034 aa7.68□□□□□ -1.18
LMO3-225ENST00000541295 SCAPERQ9BY12 1400 aa7.68□□□□□ -1.18
LMO3-225ENST00000541295 MTA1Q13330 715 aa7.68□□□□□ -1.18
LMO3-225ENST00000541295 KRBA2Q6ZNG9 492 aa7.68□□□□□ -1.18
LMO3-225ENST00000541295 NME8Q8N427 588 aa7.68□□□□□ -1.18
LMO3-225ENST00000541295 RNF217Q8TC41 542 aa7.68□□□□□ -1.18
LMO3-225ENST00000541295 ADGRL1O94910 1474 aa7.68□□□□□ -1.18
LMO3-225ENST00000541295 ABCC1P33527 1531 aa7.68□□□□□ -1.18
LMO3-225ENST00000541295 SDR16C5Q8N3Y7 309 aa7.67□□□□□ -1.18
LMO3-225ENST00000541295 MYCBPQ99417 103 aaPredicted RBP7.67□□□□□ -1.18
LMO3-225ENST00000541295 ZRANB2O95218 330 aaKnown RBP eCLIP7.67□□□□□ -1.18
LMO3-225ENST00000541295 SSFA2P28290 1259 aa7.67□□□□□ -1.18
LMO3-225ENST00000541295 TNNT3P45378 269 aaPredicted RBP7.67□□□□□ -1.18
LMO3-225ENST00000541295 GET4Q7L5D6 327 aaPredicted RBP7.66□□□□□ -1.18
LMO3-225ENST00000541295 SUDS3Q9H7L9 328 aaPredicted RBP7.66□□□□□ -1.18
LMO3-225ENST00000541295 RPRD2Q5VT52 1461 aaKnown RBP7.66□□□□□ -1.18
LMO3-225ENST00000541295 KIF3BO15066 747 aa7.66□□□□□ -1.18
LMO3-225ENST00000541295 HSPA5P11021 654 aaKnown RBP7.66□□□□□ -1.18
LMO3-225ENST00000541295 SCP2P22307 547 aa7.66□□□□□ -1.18
LMO3-225ENST00000541295 NBPF8Q3BBV2 869 aa7.66□□□□□ -1.18
LMO3-225ENST00000541295 RRAGDQ9NQL2 400 aaPredicted RBP7.66□□□□□ -1.18
LMO3-225ENST00000541295 CD109Q6YHK3 1445 aa7.66□□□□□ -1.18
LMO3-225ENST00000541295 CCDC82Q8N4S0 544 aa7.66□□□□□ -1.18
LMO3-225ENST00000541295 PIK3R5Q8WYR1 880 aa7.66□□□□□ -1.18
LMO3-225ENST00000541295 CGNQ9P2M7 1197 aaKnown RBP7.66□□□□□ -1.18
LMO3-225ENST00000541295 IPO8O15397 1037 aaKnown RBP7.65□□□□□ -1.18
LMO3-225ENST00000541295 ZCRB1Q8TBF4 217 aaKnown RBP7.65□□□□□ -1.18
LMO3-225ENST00000541295 PEX14O75381 377 aa7.65□□□□□ -1.18
LMO3-225ENST00000541295 ANKRD62A6NC57 917 aa7.65□□□□□ -1.19
LMO3-225ENST00000541295 EIF4G2P78344 907 aaKnown RBP eCLIP7.65□□□□□ -1.19
LMO3-225ENST00000541295 ANKRD23Q86SG2 305 aa7.65□□□□□ -1.19
LMO3-225ENST00000541295 FAM135AQ9P2D6 1515 aa7.64□□□□□ -1.19
LMO3-225ENST00000541295 KIF4AO95239 1232 aa7.64□□□□□ -1.19
LMO3-225ENST00000541295 LONRF3Q496Y0 759 aa7.64□□□□□ -1.19
LMO3-225ENST00000541295 DCAF11Q8TEB1 546 aa7.64□□□□□ -1.19
LMO3-225ENST00000541295 STK26Q9P289 416 aa7.64□□□□□ -1.19
LMO3-225ENST00000541295 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.64□□□□□ -1.19
LMO3-225ENST00000541295 ARHGEF1Q92888 912 aaKnown RBP7.64□□□□□ -1.19
LMO3-225ENST00000541295 CHMP4CQ96CF2 233 aa7.64□□□□□ -1.19
LMO3-225ENST00000541295 CCDC94Q9BW85 323 aaPredicted RBP7.64□□□□□ -1.19
LMO3-225ENST00000541295 EFCC1Q9HA90 598 aa7.64□□□□□ -1.19
LMO3-225ENST00000541295 ABCA9Q8IUA7 1624 aa7.64□□□□□ -1.19
LMO3-225ENST00000541295 SH3BP5O60239 455 aa7.64□□□□□ -1.19
LMO3-225ENST00000541295 RAPGEF3O95398 923 aa7.64□□□□□ -1.19
LMO3-225ENST00000541295 CCDC172P0C7W6 258 aa7.64□□□□□ -1.19
LMO3-225ENST00000541295 TDO2P48775 406 aa7.64□□□□□ -1.19
LMO3-225ENST00000541295 ATL2Q8NHH9 583 aa7.64□□□□□ -1.19
LMO3-225ENST00000541295 ANAPC4Q9UJX5 808 aa7.64□□□□□ -1.19
LMO3-225ENST00000541295 DUOX2Q9NRD8 1548 aa7.63□□□□□ -1.19
LMO3-225ENST00000541295 PRR29P0C7W0 189 aa7.63□□□□□ -1.19
LMO3-225ENST00000541295 DDX46Q7L014 1031 aaKnown RBP7.63□□□□□ -1.19
LMO3-225ENST00000541295 FAM210AQ96ND0 272 aa7.63□□□□□ -1.19
LMO3-225ENST00000541295 NBPF3Q9H094 633 aa7.63□□□□□ -1.19
LMO3-225ENST00000541295 FAM69CQ0P6D2 419 aa7.63□□□□□ -1.19
LMO3-225ENST00000541295 ZKSCAN2Q63HK3 967 aa7.63□□□□□ -1.19
LMO3-225ENST00000541295 FRAT1Q92837 279 aaPredicted RBP7.63□□□□□ -1.19
LMO3-225ENST00000541295 CALR3Q96L12 384 aaKnown RBP7.63□□□□□ -1.19
LMO3-225ENST00000541295 TEX14Q8IWB6 1497 aa7.63□□□□□ -1.19
LMO3-225ENST00000541295 CCDC144AA2RUR9 1427 aa7.63□□□□□ -1.19
LMO3-225ENST00000541295 MAST1Q9Y2H9 1570 aa7.62□□□□□ -1.19
LMO3-225ENST00000541295 CCDC66A2RUB6 948 aa7.62□□□□□ -1.19
LMO3-225ENST00000541295 CSPP1Q1MSJ5 1256 aa7.62□□□□□ -1.19
LMO3-225ENST00000541295 GGT6Q6P531 493 aa7.62□□□□□ -1.19
LMO3-225ENST00000541295 RPAINQ86UA6 219 aa7.62□□□□□ -1.19
LMO3-225ENST00000541295 RIMBP3CA6NJZ7 1639 aa7.62□□□□□ -1.19
LMO3-225ENST00000541295 RIMBP3BA6NNM3 1639 aa7.62□□□□□ -1.19
LMO3-225ENST00000541295 RIMBP3Q9UFD9 1639 aa7.62□□□□□ -1.19
LMO3-225ENST00000541295 TESPA1A2RU30 521 aaPredicted RBP7.62□□□□□ -1.19
LMO3-225ENST00000541295 ZNF853P0CG23 659 aa7.62□□□□□ -1.19
LMO3-225ENST00000541295 ZFYVE27Q5T4F4 411 aa7.62□□□□□ -1.19
LMO3-225ENST00000541295 ITFG2Q969R8 447 aa7.62□□□□□ -1.19
LMO3-225ENST00000541295 PNMA2Q9UL42 364 aa7.62□□□□□ -1.19
LMO3-225ENST00000541295 ATP7AQ04656 1500 aa7.62□□□□□ -1.19
LMO3-225ENST00000541295 PLXNC1O60486 1568 aa7.62□□□□□ -1.19
LMO3-225ENST00000541295 ZFYVE16Q7Z3T8 1539 aa7.61□□□□□ -1.19
LMO3-225ENST00000541295 EPB41L2O43491 1005 aaKnown RBP7.61□□□□□ -1.19
LMO3-225ENST00000541295 FOSBP53539 338 aa7.61□□□□□ -1.19
LMO3-225ENST00000541295 NAP1L1P55209 391 aaKnown RBP7.61□□□□□ -1.19
LMO3-225ENST00000541295 EP400NLQ6ZTU2 488 aa7.61□□□□□ -1.19
LMO3-225ENST00000541295 TRAIPQ9BWF2 469 aa7.61□□□□□ -1.19
LMO3-225ENST00000541295 CT47B1P0C2W7 299 aaPredicted RBP7.61□□□□□ -1.19
LMO3-225ENST00000541295 PROCA1Q8NCQ7 364 aaPredicted RBP7.61□□□□□ -1.19
LMO3-225ENST00000541295 ERBINQ96RT1 1412 aa7.61□□□□□ -1.19
LMO3-225ENST00000541295 PES1O00541 588 aaKnown RBP7.61□□□□□ -1.19
LMO3-225ENST00000541295 LMOD2Q6P5Q4 547 aa7.61□□□□□ -1.19
LMO3-225ENST00000541295 MNS1Q8NEH6 495 aa7.61□□□□□ -1.19
LMO3-225ENST00000541295 RIOK3O14730 519 aaKnown RBP7.6□□□□□ -1.19
LMO3-225ENST00000541295 LIG1P18858 919 aa7.6□□□□□ -1.19
LMO3-225ENST00000541295 KCNJ4P48050 445 aa7.6□□□□□ -1.19
LMO3-225ENST00000541295 IRX5P78411 483 aaPredicted RBP7.6□□□□□ -1.19
LMO3-225ENST00000541295 HMGN5P82970 282 aaKnown RBP7.6□□□□□ -1.19
LMO3-225ENST00000541295 GPBP1L1Q9HC44 474 aaPredicted RBP7.6□□□□□ -1.19
LMO3-225ENST00000541295 SMC4Q9NTJ3 1288 aa7.6□□□□□ -1.19
LMO3-225ENST00000541295 FAM13BQ9NYF5 915 aa7.6□□□□□ -1.19
LMO3-225ENST00000541295 ARAP3Q8WWN8 1544 aa7.6□□□□□ -1.19
LMO3-225ENST00000541295 KANK1Q14678 1352 aa7.6□□□□□ -1.19
LMO3-225ENST00000541295 ADRA2BP18089 450 aa7.6□□□□□ -1.19
LMO3-225ENST00000541295 MICAL1Q8TDZ2 1067 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms