RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 CRIPAKQ8N1N5 446 aa11.69□□□□□ -0.54
TTR-203ENST00000541025 AAASQ9NRG9 546 aa11.69□□□□□ -0.54
TTR-203ENST00000541025 CTC1Q2NKJ3 1217 aa11.68□□□□□ -0.54
TTR-203ENST00000541025 SMPD1P17405 629 aa11.66□□□□□ -0.54
TTR-203ENST00000541025 SMCPP49901 116 aaPredicted RBP11.66□□□□□ -0.54
TTR-203ENST00000541025 UNC93B1Q9H1C4 597 aa11.66□□□□□ -0.54
TTR-203ENST00000541025 LIMD1Q9UGP4 676 aa11.66□□□□□ -0.54
TTR-203ENST00000541025 CFAP99D6REC4 459 aa11.65□□□□□ -0.54
TTR-203ENST00000541025 CSPP1Q1MSJ5 1256 aa11.65□□□□□ -0.54
TTR-203ENST00000541025 NUTM2BA6NNL0 878 aaPredicted RBP11.64□□□□□ -0.55
TTR-203ENST00000541025 NUTM2EB1AL46 878 aaPredicted RBP11.64□□□□□ -0.55
TTR-203ENST00000541025 AXIN1O15169 862 aa11.64□□□□□ -0.55
TTR-203ENST00000541025 LILRB3O75022 631 aa11.64□□□□□ -0.55
TTR-203ENST00000541025 NUTM2DQ5VT03 806 aaPredicted RBP11.64□□□□□ -0.55
TTR-203ENST00000541025 NUTM2AQ8IVF1 878 aaPredicted RBP11.64□□□□□ -0.55
TTR-203ENST00000541025 CABLES1Q8TDN4 633 aa11.64□□□□□ -0.55
TTR-203ENST00000541025 J3QL48 77 aa11.63□□□□□ -0.55
TTR-203ENST00000541025 ST8SIA5O15466 376 aa11.63□□□□□ -0.55
TTR-203ENST00000541025 SH3BP2P78314 561 aa11.63□□□□□ -0.55
TTR-203ENST00000541025 NESP48681 1621 aa11.63□□□□□ -0.55
TTR-203ENST00000541025 TOP2AP11388 1531 aaKnown RBP11.62□□□□□ -0.55
TTR-203ENST00000541025 SIAH2O43255 324 aa11.62□□□□□ -0.55
TTR-203ENST00000541025 EHBP1Q8NDI1 1231 aa11.62□□□□□ -0.55
TTR-203ENST00000541025 BAP1Q92560 729 aa11.62□□□□□ -0.55
TTR-203ENST00000541025 CTHP32929 405 aa11.61□□□□□ -0.55
TTR-203ENST00000541025 CLK2P49760 499 aaKnown RBP11.61□□□□□ -0.55
TTR-203ENST00000541025 QPCTQ16769 361 aa11.6□□□□□ -0.55
TTR-203ENST00000541025 DDRGK1Q96HY6 314 aa11.59□□□□□ -0.55
TTR-203ENST00000541025 KDM4CQ9H3R0 1056 aa11.59□□□□□ -0.55
TTR-203ENST00000541025 POLR3EQ9NVU0 708 aa11.59□□□□□ -0.55
TTR-203ENST00000541025 ALDH1A1P00352 501 aa11.58□□□□□ -0.56
TTR-203ENST00000541025 F12P00748 615 aaPredicted RBP11.58□□□□□ -0.56
TTR-203ENST00000541025 ZNF511Q8NB15 262 aa11.58□□□□□ -0.56
TTR-203ENST00000541025 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.56
TTR-203ENST00000541025 KIF21AQ7Z4S6 1674 aa11.57□□□□□ -0.56
TTR-203ENST00000541025 POTECB2RU33 542 aa11.57□□□□□ -0.56
TTR-203ENST00000541025 VARSP26640 1264 aaKnown RBP11.57□□□□□ -0.56
TTR-203ENST00000541025 SKIV2LQ15477 1246 aaKnown RBP11.57□□□□□ -0.56
TTR-203ENST00000541025 RTL5Q5HYW3 569 aaPredicted RBP11.57□□□□□ -0.56
TTR-203ENST00000541025 LINC01559Q495D7 138 aa11.56□□□□□ -0.56
TTR-203ENST00000541025 MPNDQ8N594 471 aa11.56□□□□□ -0.56
TTR-203ENST00000541025 HELBQ8NG08 1087 aaPredicted RBP11.56□□□□□ -0.56
TTR-203ENST00000541025 HPS1Q92902 700 aa11.56□□□□□ -0.56
TTR-203ENST00000541025 GPBP1L1Q9HC44 474 aaPredicted RBP11.56□□□□□ -0.56
TTR-203ENST00000541025 DACH1Q9UI36 760 aa11.56□□□□□ -0.56
TTR-203ENST00000541025 TSC1Q92574 1164 aa11.55□□□□□ -0.56
TTR-203ENST00000541025 PLEKHG3A1L390 1219 aa11.54□□□□□ -0.56
TTR-203ENST00000541025 PER1O15534 1290 aaPredicted RBP11.54□□□□□ -0.56
TTR-203ENST00000541025 SH3D19Q5HYK7 790 aa11.54□□□□□ -0.56
TTR-203ENST00000541025 FAM117AQ9C073 453 aa11.54□□□□□ -0.56
TTR-203ENST00000541025 ARMC2Q8NEN0 867 aa11.53□□□□□ -0.56
TTR-203ENST00000541025 MAP10Q9P2G4 905 aa11.53□□□□□ -0.56
TTR-203ENST00000541025 WASF2Q9Y6W5 498 aa11.53□□□□□ -0.56
TTR-203ENST00000541025 ZNF775Q96BV0 537 aaPredicted RBP11.52□□□□□ -0.57
TTR-203ENST00000541025 PRDM2Q13029 1718 aa11.52□□□□□ -0.57
TTR-203ENST00000541025 ERCC6Q03468 1493 aa11.51□□□□□ -0.57
TTR-203ENST00000541025 THOC2Q8NI27 1593 aaKnown RBP11.5□□□□□ -0.57
TTR-203ENST00000541025 FAM174AQ8TBP5 190 aa11.49□□□□□ -0.57
TTR-203ENST00000541025 ATP13A2Q9NQ11 1180 aa11.49□□□□□ -0.57
TTR-203ENST00000541025 GMPR2Q9P2T1 348 aaKnown RBP11.49□□□□□ -0.57
TTR-203ENST00000541025 C11orf95C9JLR9 678 aaPredicted RBP11.48□□□□□ -0.57
TTR-203ENST00000541025 CADPSQ9ULU8 1353 aa11.48□□□□□ -0.57
TTR-203ENST00000541025 CCDC88BA6NC98 1476 aa11.47□□□□□ -0.57
TTR-203ENST00000541025 PPP2R2DQ66LE6 453 aa11.47□□□□□ -0.57
TTR-203ENST00000541025 BPHLQ86WA6 291 aaPredicted RBP11.47□□□□□ -0.57
TTR-203ENST00000541025 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.47□□□□□ -0.57
TTR-203ENST00000541025 SENP2Q9HC62 589 aa11.47□□□□□ -0.57
TTR-203ENST00000541025 PROCA1Q8NCQ7 364 aaPredicted RBP11.46□□□□□ -0.57
TTR-203ENST00000541025 FOXJ1Q92949 421 aa11.46□□□□□ -0.57
TTR-203ENST00000541025 ATP1B4Q9UN42 357 aaPredicted RBP11.46□□□□□ -0.57
TTR-203ENST00000541025 CTDSPL2Q05D32 466 aa11.45□□□□□ -0.58
TTR-203ENST00000541025 AGERQ15109 404 aa11.45□□□□□ -0.58
TTR-203ENST00000541025 CDK15Q96Q40 435 aa11.45□□□□□ -0.58
TTR-203ENST00000541025 CAPN5O15484 640 aaPredicted RBP11.44□□□□□ -0.58
TTR-203ENST00000541025 TPRNQ4KMQ1 711 aa11.44□□□□□ -0.58
TTR-203ENST00000541025 NBPF14Q5TI25 921 aa11.44□□□□□ -0.58
TTR-203ENST00000541025 TLL2Q9Y6L7 1015 aa11.44□□□□□ -0.58
TTR-203ENST00000541025 CFTRP13569 1480 aa11.44□□□□□ -0.58
TTR-203ENST00000541025 GPKOWQ92917 476 aaPredicted RBP eCLIP11.43□□□□□ -0.58
TTR-203ENST00000541025 PDS5BQ9NTI5 1447 aa11.43□□□□□ -0.58
TTR-203ENST00000541025 KIFC2Q96AC6 838 aa11.42□□□□□ -0.58
TTR-203ENST00000541025 GOPCQ9HD26 462 aa11.42□□□□□ -0.58
TTR-203ENST00000541025 PRKCSHP14314 528 aaPredicted RBP11.41□□□□□ -0.58
TTR-203ENST00000541025 TRIM47Q96LD4 638 aa11.41□□□□□ -0.58
TTR-203ENST00000541025 CUX2O14529 1486 aa11.4□□□□□ -0.58
TTR-203ENST00000541025 ADH1CP00326 375 aa11.4□□□□□ -0.58
TTR-203ENST00000541025 NNTQ13423 1086 aa11.4□□□□□ -0.58
TTR-203ENST00000541025 C4orf48Q5BLP8 95 aa11.4□□□□□ -0.58
TTR-203ENST00000541025 SH3RF1Q7Z6J0 888 aa11.4□□□□□ -0.58
TTR-203ENST00000541025 FANCD2Q9BXW9 1451 aa11.38□□□□□ -0.59
TTR-203ENST00000541025 NR5A1Q13285 461 aa11.38□□□□□ -0.59
TTR-203ENST00000541025 ARID5BQ14865 1188 aa11.38□□□□□ -0.59
TTR-203ENST00000541025 NEUROD2Q15784 382 aa11.38□□□□□ -0.59
TTR-203ENST00000541025 FBXO31Q5XUX0 539 aaPredicted RBP11.38□□□□□ -0.59
TTR-203ENST00000541025 PDXDC2PQ6P474 469 aa11.37□□□□□ -0.59
TTR-203ENST00000541025 SH3BP5LQ7L8J4 393 aa11.37□□□□□ -0.59
TTR-203ENST00000541025 LRRN4Q8WUT4 740 aa11.37□□□□□ -0.59
TTR-203ENST00000541025 C1QTNF2Q9BXJ5 285 aa11.37□□□□□ -0.59
TTR-203ENST00000541025 CEP164Q9UPV0 1460 aa11.37□□□□□ -0.59
TTR-203ENST00000541025 AP1G2O75843 785 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms