RNA–Protein interactions for RNA: ENST00000541017.5

PPFIA2-204, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 2 BASIC

Gene PPFIA2, Length 4,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-204ENST00000541017 SLAIN2Q9P270 581 aa11.14□□□□□ -0.63
PPFIA2-204ENST00000541017 U2AF1L5P0DN76 240 aaPredicted RBP11.14□□□□□ -0.63
PPFIA2-204ENST00000541017 U2AF1Q01081 240 aaKnown RBP eCLIP11.14□□□□□ -0.63
PPFIA2-204ENST00000541017 KIF24Q5T7B8 1368 aa11.13□□□□□ -0.63
PPFIA2-204ENST00000541017 RTF1Q92541 710 aaKnown RBP11.13□□□□□ -0.63
PPFIA2-204ENST00000541017 GGNBP2Q9H3C7 697 aa11.13□□□□□ -0.63
PPFIA2-204ENST00000541017 EVA1CP58658 441 aa11.13□□□□□ -0.63
PPFIA2-204ENST00000541017 CDC42BPGQ6DT37 1551 aa11.12□□□□□ -0.63
PPFIA2-204ENST00000541017 MYO5BQ9ULV0 1848 aa11.12□□□□□ -0.63
PPFIA2-204ENST00000541017 PPP2R1AP30153 589 aa11.12□□□□□ -0.63
PPFIA2-204ENST00000541017 A0A1W2PP64 1363 aa11.12□□□□□ -0.63
PPFIA2-204ENST00000541017 PLEKHH1Q9ULM0 1364 aa11.11□□□□□ -0.63
PPFIA2-204ENST00000541017 FOXO3O43524 673 aa11.11□□□□□ -0.63
PPFIA2-204ENST00000541017 MEX3CQ5U5Q3 659 aaKnown RBP11.11□□□□□ -0.63
PPFIA2-204ENST00000541017 SBNO1A3KN83 1393 aa11.1□□□□□ -0.63
PPFIA2-204ENST00000541017 ADGRB2O60241 1585 aa11.1□□□□□ -0.63
PPFIA2-204ENST00000541017 ZNF335Q9H4Z2 1342 aaPredicted RBP11.1□□□□□ -0.63
PPFIA2-204ENST00000541017 ITSN1Q15811 1721 aa11.1□□□□□ -0.63
PPFIA2-204ENST00000541017 ARHGEF28Q8N1W1 1705 aaKnown RBP11.1□□□□□ -0.63
PPFIA2-204ENST00000541017 SOX12O15370 315 aa11.09□□□□□ -0.63
PPFIA2-204ENST00000541017 PRDM11Q9NQV5 511 aa11.09□□□□□ -0.63
PPFIA2-204ENST00000541017 MS4A1P11836 297 aa11.09□□□□□ -0.63
PPFIA2-204ENST00000541017 INSRP06213 1382 aa11.09□□□□□ -0.63
PPFIA2-204ENST00000541017 PARD3Q8TEW0 1356 aa11.09□□□□□ -0.63
PPFIA2-204ENST00000541017 MTHFSP49914 203 aa11.09□□□□□ -0.63
PPFIA2-204ENST00000541017 GAS2L2Q8NHY3 880 aa11.09□□□□□ -0.63
PPFIA2-204ENST00000541017 RAPGEF4Q8WZA2 1011 aa11.09□□□□□ -0.63
PPFIA2-204ENST00000541017 MYH16Q9H6N6 1097 aa11.09□□□□□ -0.63
PPFIA2-204ENST00000541017 USP6P35125 1406 aa11.09□□□□□ -0.63
PPFIA2-204ENST00000541017 C11orf95C9JLR9 678 aaPredicted RBP11.08□□□□□ -0.64
PPFIA2-204ENST00000541017 AMER1Q5JTC6 1135 aaPredicted RBP11.08□□□□□ -0.64
PPFIA2-204ENST00000541017 NWD1Q149M9 1564 aa11.08□□□□□ -0.64
PPFIA2-204ENST00000541017 NPM2Q86SE8 214 aaKnown RBP11.08□□□□□ -0.64
PPFIA2-204ENST00000541017 RUNDC1Q96C34 613 aa11.08□□□□□ -0.64
PPFIA2-204ENST00000541017 AATKQ6ZMQ8 1374 aa11.08□□□□□ -0.64
PPFIA2-204ENST00000541017 PTPRUQ92729 1446 aa11.07□□□□□ -0.64
PPFIA2-204ENST00000541017 CHMP4BQ9H444 224 aaKnown RBP11.07□□□□□ -0.64
PPFIA2-204ENST00000541017 POLR3AO14802 1390 aaPredicted RBP11.07□□□□□ -0.64
PPFIA2-204ENST00000541017 RTL1A6NKG5 1358 aa11.07□□□□□ -0.64
PPFIA2-204ENST00000541017 FLT4P35916 1363 aa11.07□□□□□ -0.64
PPFIA2-204ENST00000541017 IQSEC2Q5JU85 1478 aa11.07□□□□□ -0.64
PPFIA2-204ENST00000541017 FYB1O15117 783 aa11.07□□□□□ -0.64
PPFIA2-204ENST00000541017 HSP90AB1P08238 724 aaKnown RBP11.07□□□□□ -0.64
PPFIA2-204ENST00000541017 C1orf141Q5JVX7 400 aa11.07□□□□□ -0.64
PPFIA2-204ENST00000541017 CANXP27824 592 aaKnown RBP11.06□□□□□ -0.64
PPFIA2-204ENST00000541017 C1orf167Q5SNV9 1468 aa11.06□□□□□ -0.64
PPFIA2-204ENST00000541017 FCHSD2O94868 740 aa11.06□□□□□ -0.64
PPFIA2-204ENST00000541017 PIP4K2BP78356 416 aa11.06□□□□□ -0.64
PPFIA2-204ENST00000541017 KIF1AQ12756 1690 aa11.06□□□□□ -0.64
PPFIA2-204ENST00000541017 PLEKHO1Q53GL0 409 aaPredicted RBP11.06□□□□□ -0.64
PPFIA2-204ENST00000541017 NME9Q86XW9 330 aa11.06□□□□□ -0.64
PPFIA2-204ENST00000541017 XRN1Q8IZH2 1706 aaKnown RBP11.05□□□□□ -0.64
PPFIA2-204ENST00000541017 PER1O15534 1290 aaPredicted RBP11.05□□□□□ -0.64
PPFIA2-204ENST00000541017 USP31Q70CQ4 1352 aa11.04□□□□□ -0.64
PPFIA2-204ENST00000541017 PLEKHG5O94827 1062 aa11.04□□□□□ -0.64
PPFIA2-204ENST00000541017 TATP17735 454 aaPredicted RBP11.04□□□□□ -0.64
PPFIA2-204ENST00000541017 CERKQ8TCT0 537 aa11.04□□□□□ -0.64
PPFIA2-204ENST00000541017 CCDC9Q9Y3X0 531 aaKnown RBP11.04□□□□□ -0.64
PPFIA2-204ENST00000541017 AMOTQ4VCS5 1084 aa11.04□□□□□ -0.64
PPFIA2-204ENST00000541017 CDCA7Q9BWT1 371 aaPredicted RBP11.04□□□□□ -0.64
PPFIA2-204ENST00000541017 NCBP3Q53F19 620 aaKnown RBP11.04□□□□□ -0.64
PPFIA2-204ENST00000541017 SPG7Q9UQ90 795 aa11.03□□□□□ -0.64
PPFIA2-204ENST00000541017 CPSF1Q10570 1443 aaKnown RBP11.03□□□□□ -0.64
PPFIA2-204ENST00000541017 NRXN3Q9Y4C0 1643 aa11.02□□□□□ -0.64
PPFIA2-204ENST00000541017 PNISRQ8TF01 805 aaKnown RBP11.02□□□□□ -0.65
PPFIA2-204ENST00000541017 NLRP2Q9NX02 1062 aa11.02□□□□□ -0.65
PPFIA2-204ENST00000541017 USP32Q8NFA0 1604 aa11.02□□□□□ -0.65
PPFIA2-204ENST00000541017 CHD2O14647 1828 aaKnown RBP11.02□□□□□ -0.65
PPFIA2-204ENST00000541017 ORAI2Q96SN7 254 aa11.02□□□□□ -0.65
PPFIA2-204ENST00000541017 TNS3Q68CZ2 1445 aa11.01□□□□□ -0.65
PPFIA2-204ENST00000541017 PRR36Q9H6K5 1346 aa11.01□□□□□ -0.65
PPFIA2-204ENST00000541017 A0A0G2JS52 829 aa11.01□□□□□ -0.65
PPFIA2-204ENST00000541017 MYT1Q01538 1121 aa11.01□□□□□ -0.65
PPFIA2-204ENST00000541017 RBM33Q96EV2 1170 aaKnown RBP11.01□□□□□ -0.65
PPFIA2-204ENST00000541017 GCP02774 474 aa11.01□□□□□ -0.65
PPFIA2-204ENST00000541017 GOLGA2Q08379 1002 aa11.01□□□□□ -0.65
PPFIA2-204ENST00000541017 LTV1Q96GA3 475 aaPredicted RBP11.01□□□□□ -0.65
PPFIA2-204ENST00000541017 IP6K1Q92551 441 aa11□□□□□ -0.65
PPFIA2-204ENST00000541017 ZBED9Q6R2W3 1325 aa11□□□□□ -0.65
PPFIA2-204ENST00000541017 LRRC7Q96NW7 1537 aa11□□□□□ -0.65
PPFIA2-204ENST00000541017 BRINP3Q76B58 766 aa11□□□□□ -0.65
PPFIA2-204ENST00000541017 CARD14Q9BXL6 1004 aa11□□□□□ -0.65
PPFIA2-204ENST00000541017 NUTM2GQ5VZR2 741 aa11□□□□□ -0.65
PPFIA2-204ENST00000541017 E9PSI1 815 aa10.99□□□□□ -0.65
PPFIA2-204ENST00000541017 TOM1L2Q6ZVM7 507 aa10.99□□□□□ -0.65
PPFIA2-204ENST00000541017 SPATA31A3Q5VYP0 1347 aa10.99□□□□□ -0.65
PPFIA2-204ENST00000541017 MST1RQ04912 1400 aa10.99□□□□□ -0.65
PPFIA2-204ENST00000541017 TEFQ10587 303 aa10.99□□□□□ -0.65
PPFIA2-204ENST00000541017 GNAI1P63096 354 aa10.98□□□□□ -0.65
PPFIA2-204ENST00000541017 HDAC5Q9UQL6 1122 aa10.98□□□□□ -0.65
PPFIA2-204ENST00000541017 XPCQ01831 940 aaPredicted RBP10.98□□□□□ -0.65
PPFIA2-204ENST00000541017 BLMP54132 1417 aaPredicted RBP10.97□□□□□ -0.65
PPFIA2-204ENST00000541017 HTATSF1O43719 755 aaKnown RBP10.97□□□□□ -0.65
PPFIA2-204ENST00000541017 CT47B1P0C2W7 299 aaPredicted RBP10.97□□□□□ -0.65
PPFIA2-204ENST00000541017 JCADQ9P266 1359 aa10.97□□□□□ -0.65
PPFIA2-204ENST00000541017 ZBTB47Q9UFB7 747 aaPredicted RBP10.97□□□□□ -0.65
PPFIA2-204ENST00000541017 SPATA31A6Q5VVP1 1343 aa10.97□□□□□ -0.65
PPFIA2-204ENST00000541017 CDK12Q9NYV4 1490 aaPredicted RBP10.97□□□□□ -0.65
PPFIA2-204ENST00000541017 IPO8O15397 1037 aaKnown RBP10.96□□□□□ -0.65
PPFIA2-204ENST00000541017 WDR63Q8IWG1 891 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms