RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 DIP2BQ9P265 1576 aa13.79□□□□□ -0.2
LMO3-224ENST00000540848 ZBED9Q6R2W3 1325 aa13.79□□□□□ -0.2
LMO3-224ENST00000540848 ZNF687Q8N1G0 1237 aa13.79□□□□□ -0.2
LMO3-224ENST00000540848 PCDHGA4Q9Y5G9 962 aa13.79□□□□□ -0.2
LMO3-224ENST00000540848 RPGRIP1LQ68CZ1 1315 aa13.78□□□□□ -0.2
LMO3-224ENST00000540848 SETBP1Q9Y6X0 1596 aa13.78□□□□□ -0.2
LMO3-224ENST00000540848 MYBBP1AQ9BQG0 1328 aaKnown RBP13.77□□□□□ -0.2
LMO3-224ENST00000540848 NUDT7P0C024 238 aa13.77□□□□□ -0.21
LMO3-224ENST00000540848 REREQ9P2R6 1566 aa13.77□□□□□ -0.21
LMO3-224ENST00000540848 NOS1P29475 1434 aa13.76□□□□□ -0.21
LMO3-224ENST00000540848 GPHNQ9NQX3 736 aaPredicted RBP13.76□□□□□ -0.21
LMO3-224ENST00000540848 FOXK1P85037 733 aa13.75□□□□□ -0.21
LMO3-224ENST00000540848 CYB5RLQ6IPT4 315 aa13.75□□□□□ -0.21
LMO3-224ENST00000540848 MROH2AA6NES4 1674 aa13.75□□□□□ -0.21
LMO3-224ENST00000540848 PIK3C2BO00750 1634 aa13.75□□□□□ -0.21
LMO3-224ENST00000540848 PARD3Q8TEW0 1356 aa13.74□□□□□ -0.21
LMO3-224ENST00000540848 DISP3Q9P2K9 1392 aa13.74□□□□□ -0.21
LMO3-224ENST00000540848 SYNMO15061 1565 aa13.74□□□□□ -0.21
LMO3-224ENST00000540848 PPLO60437 1756 aa13.74□□□□□ -0.21
LMO3-224ENST00000540848 MYO3AQ8NEV4 1616 aa13.74□□□□□ -0.21
LMO3-224ENST00000540848 GTPBP6O43824 516 aaPredicted RBP13.74□□□□□ -0.21
LMO3-224ENST00000540848 DSG2Q14126 1118 aa13.74□□□□□ -0.21
LMO3-224ENST00000540848 CCDC184Q52MB2 194 aa13.74□□□□□ -0.21
LMO3-224ENST00000540848 INSRP06213 1382 aa13.74□□□□□ -0.21
LMO3-224ENST00000540848 UGGT1Q9NYU2 1555 aa13.74□□□□□ -0.21
LMO3-224ENST00000540848 RAPGEF3O95398 923 aa13.73□□□□□ -0.21
LMO3-224ENST00000540848 FAM9BQ8IZU0 186 aa13.73□□□□□ -0.21
LMO3-224ENST00000540848 SBNO2Q9Y2G9 1366 aa13.73□□□□□ -0.21
LMO3-224ENST00000540848 KDM4FA0A1W2PPD8 638 aa13.72□□□□□ -0.21
LMO3-224ENST00000540848 GGT6Q6P531 493 aa13.72□□□□□ -0.21
LMO3-224ENST00000540848 PLPP6Q8IY26 295 aa13.72□□□□□ -0.21
LMO3-224ENST00000540848 TMC1Q8TDI8 760 aa13.72□□□□□ -0.21
LMO3-224ENST00000540848 PER1O15534 1290 aaPredicted RBP13.71□□□□□ -0.21
LMO3-224ENST00000540848 ERICH6BQ5W0A0 696 aa13.71□□□□□ -0.21
LMO3-224ENST00000540848 NLRP13Q86W25 1043 aa13.71□□□□□ -0.21
LMO3-224ENST00000540848 AGLP35573 1532 aa13.71□□□□□ -0.21
LMO3-224ENST00000540848 LHX6Q9UPM6 363 aa13.71□□□□□ -0.22
LMO3-224ENST00000540848 KDM5AP29375 1690 aaKnown RBP13.7□□□□□ -0.22
LMO3-224ENST00000540848 LRPPRCP42704 1394 aaKnown RBP13.7□□□□□ -0.22
LMO3-224ENST00000540848 PNISRQ8TF01 805 aaKnown RBP13.7□□□□□ -0.22
LMO3-224ENST00000540848 PIK3C2GO75747 1445 aa13.7□□□□□ -0.22
LMO3-224ENST00000540848 FAM69CQ0P6D2 419 aa13.69□□□□□ -0.22
LMO3-224ENST00000540848 PTCD2Q8WV60 388 aaKnown RBP13.69□□□□□ -0.22
LMO3-224ENST00000540848 SLC52A1Q9NWF4 448 aa13.69□□□□□ -0.22
LMO3-224ENST00000540848 NPC1L1Q9UHC9 1359 aa13.68□□□□□ -0.22
LMO3-224ENST00000540848 ZFYVE9O95405 1425 aa13.68□□□□□ -0.22
LMO3-224ENST00000540848 YEATS2Q9ULM3 1422 aa13.68□□□□□ -0.22
LMO3-224ENST00000540848 POTEEQ6S8J3 1075 aa13.67□□□□□ -0.22
LMO3-224ENST00000540848 CRISPLD2Q9H0B8 497 aa13.67□□□□□ -0.22
LMO3-224ENST00000540848 SIGLEC1Q9BZZ2 1709 aa13.67□□□□□ -0.22
LMO3-224ENST00000540848 ADGRF5Q8IZF2 1346 aa13.67□□□□□ -0.22
LMO3-224ENST00000540848 PANK3Q9H999 370 aa13.66□□□□□ -0.22
LMO3-224ENST00000540848 RYDENQ9NUL5 291 aaKnown RBP13.66□□□□□ -0.22
LMO3-224ENST00000540848 NCKAP5LQ9HCH0 1330 aa13.66□□□□□ -0.22
LMO3-224ENST00000540848 PREX1Q8TCU6 1659 aa13.66□□□□□ -0.22
LMO3-224ENST00000540848 C14orf93Q9H972 538 aaKnown RBP13.65□□□□□ -0.22
LMO3-224ENST00000540848 SMG6Q86US8 1419 aaKnown RBP13.65□□□□□ -0.22
LMO3-224ENST00000540848 MYOM1P52179 1685 aa13.64□□□□□ -0.23
LMO3-224ENST00000540848 CFAP70Q5T0N1 1121 aa13.64□□□□□ -0.23
LMO3-224ENST00000540848 KNSTRNQ9Y448 316 aa13.64□□□□□ -0.23
LMO3-224ENST00000540848 CFAP65Q6ZU64 1925 aaKnown RBP13.64□□□□□ -0.23
LMO3-224ENST00000540848 NEXMIFQ5QGS0 1516 aa13.64□□□□□ -0.23
LMO3-224ENST00000540848 ASXL1Q8IXJ9 1541 aa13.64□□□□□ -0.23
LMO3-224ENST00000540848 ADGRB1O14514 1584 aa13.64□□□□□ -0.23
LMO3-224ENST00000540848 ERVK-7P63135 1459 aa13.62□□□□□ -0.23
LMO3-224ENST00000540848 PUS7Q96PZ0 661 aaKnown RBP13.62□□□□□ -0.23
LMO3-224ENST00000540848 TSPOAP1O95153 1857 aa13.61□□□□□ -0.23
LMO3-224ENST00000540848 ARHGEF40Q8TER5 1519 aa13.61□□□□□ -0.23
LMO3-224ENST00000540848 CENPJQ9HC77 1338 aaPredicted RBP13.61□□□□□ -0.23
LMO3-224ENST00000540848 TMEM131LA2VDJ0 1609 aa13.6□□□□□ -0.23
LMO3-224ENST00000540848 KIF13AQ9H1H9 1805 aa13.6□□□□□ -0.23
LMO3-224ENST00000540848 QRICH2Q9H0J4 1663 aa13.59□□□□□ -0.23
LMO3-224ENST00000540848 PDE3BQ13370 1112 aa13.58□□□□□ -0.23
LMO3-224ENST00000540848 NUDCQ9Y266 331 aa13.58□□□□□ -0.23
LMO3-224ENST00000540848 AMER1Q5JTC6 1135 aaPredicted RBP13.58□□□□□ -0.24
LMO3-224ENST00000540848 AXIN2Q9Y2T1 843 aa13.58□□□□□ -0.24
LMO3-224ENST00000540848 BLMP54132 1417 aaPredicted RBP13.57□□□□□ -0.24
LMO3-224ENST00000540848 IDI1Q13907 227 aa13.57□□□□□ -0.24
LMO3-224ENST00000540848 SPATA31D1Q6ZQQ2 1576 aa13.57□□□□□ -0.24
LMO3-224ENST00000540848 LSM11P83369 360 aaKnown RBP eCLIP13.56□□□□□ -0.24
LMO3-224ENST00000540848 PPP1R15BQ5SWA1 713 aa13.56□□□□□ -0.24
LMO3-224ENST00000540848 CC2D1BQ5T0F9 858 aaKnown RBP13.56□□□□□ -0.24
LMO3-224ENST00000540848 OXER1Q8TDS5 423 aa13.56□□□□□ -0.24
LMO3-224ENST00000540848 ARHGEF28Q8N1W1 1705 aaKnown RBP13.55□□□□□ -0.24
LMO3-224ENST00000540848 CNGB1Q14028 1251 aaPredicted RBP13.55□□□□□ -0.24
LMO3-224ENST00000540848 ANKRD13DQ6ZTN6 518 aa13.55□□□□□ -0.24
LMO3-224ENST00000540848 USP32Q8NFA0 1604 aa13.55□□□□□ -0.24
LMO3-224ENST00000540848 CADPS2Q86UW7 1296 aa13.54□□□□□ -0.24
LMO3-224ENST00000540848 NINLQ9Y2I6 1382 aa13.53□□□□□ -0.24
LMO3-224ENST00000540848 CLTCQ00610 1675 aaKnown RBP13.53□□□□□ -0.24
LMO3-224ENST00000540848 RNF123Q5XPI4 1314 aa13.52□□□□□ -0.24
LMO3-224ENST00000540848 MYO5BQ9ULV0 1848 aa13.52□□□□□ -0.24
LMO3-224ENST00000540848 PPP2R1AP30153 589 aa13.52□□□□□ -0.25
LMO3-224ENST00000540848 PBX2P40425 430 aa13.52□□□□□ -0.25
LMO3-224ENST00000540848 UPF1Q92900 1129 aaKnown RBP eCLIP13.52□□□□□ -0.25
LMO3-224ENST00000540848 EVC2Q86UK5 1308 aa13.52□□□□□ -0.25
LMO3-224ENST00000540848 PDE4AP27815 886 aa13.51□□□□□ -0.25
LMO3-224ENST00000540848 RNF166Q96A37 237 aaPredicted RBP13.5□□□□□ -0.25
LMO3-224ENST00000540848 PPP4R2Q9NY27 417 aa13.5□□□□□ -0.25
LMO3-224ENST00000540848 TRAK1Q9UPV9 953 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms