RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 PCGF6Q9BYE7 350 aa27.31■■□□□ 1.96
RAB35-204ENST00000540803 ATRNO75882 1429 aa27.31■■□□□ 1.96
RAB35-204ENST00000540803 SLIT2O94813 1529 aa27.31■■□□□ 1.96
RAB35-204ENST00000540803 CARD11Q9BXL7 1154 aa27.3■■□□□ 1.96
RAB35-204ENST00000540803 TRPC5Q9UL62 973 aaPredicted RBP27.3■■□□□ 1.96
RAB35-204ENST00000540803 PAK3O75914 559 aaPredicted RBP27.29■■□□□ 1.96
RAB35-204ENST00000540803 PLCH1Q4KWH8 1693 aa27.28■■□□□ 1.96
RAB35-204ENST00000540803 EVC2Q86UK5 1308 aa27.28■■□□□ 1.96
RAB35-204ENST00000540803 RGS12O14924 1447 aa27.27■■□□□ 1.96
RAB35-204ENST00000540803 NWD2Q9ULI1 1742 aa27.26■■□□□ 1.95
RAB35-204ENST00000540803 PHRF1Q9P1Y6 1649 aaKnown RBP27.23■■□□□ 1.95
RAB35-204ENST00000540803 SBNO2Q9Y2G9 1366 aa27.23■■□□□ 1.95
RAB35-204ENST00000540803 UNC5CLQ8IV45 518 aa27.22■■□□□ 1.95
RAB35-204ENST00000540803 CABP1Q9NZU7 370 aa27.22■■□□□ 1.95
RAB35-204ENST00000540803 COL14A1Q05707 1796 aaKnown RBP27.2■■□□□ 1.94
RAB35-204ENST00000540803 CLSPNQ9HAW4 1339 aa27.19■■□□□ 1.94
RAB35-204ENST00000540803 FAM83GA6ND36 823 aa27.19■■□□□ 1.94
RAB35-204ENST00000540803 NRAPQ86VF7 1730 aa27.19■■□□□ 1.94
RAB35-204ENST00000540803 AKAP12Q02952 1782 aa27.18■■□□□ 1.94
RAB35-204ENST00000540803 GLI3P10071 1580 aa27.18■■□□□ 1.94
RAB35-204ENST00000540803 USP6P35125 1406 aa27.17■■□□□ 1.94
RAB35-204ENST00000540803 NUTM2GQ5VZR2 741 aa27.17■■□□□ 1.94
RAB35-204ENST00000540803 GJD4Q96KN9 370 aaPredicted RBP27.17■■□□□ 1.94
RAB35-204ENST00000540803 BRD4O60885 1362 aaPredicted RBP27.15■■□□□ 1.94
RAB35-204ENST00000540803 ATAD2Q6PL18 1390 aa27.15■■□□□ 1.94
RAB35-204ENST00000540803 ABTB2Q8N961 1025 aa27.14■■□□□ 1.94
RAB35-204ENST00000540803 NRKQ7Z2Y5 1582 aa27.14■■□□□ 1.93
RAB35-204ENST00000540803 SSH2Q76I76 1423 aa27.13■■□□□ 1.93
RAB35-204ENST00000540803 VPS72Q15906 364 aa27.11■■□□□ 1.93
RAB35-204ENST00000540803 UPF1Q92900 1129 aaKnown RBP eCLIP27.1■■□□□ 1.93
RAB35-204ENST00000540803 BTG4Q9NY30 223 aa27.1■■□□□ 1.93
RAB35-204ENST00000540803 TIMELESSQ9UNS1 1208 aa27.1■■□□□ 1.93
RAB35-204ENST00000540803 PIK3C2AO00443 1686 aa27.1■■□□□ 1.93
RAB35-204ENST00000540803 USP19O94966 1318 aa27.1■■□□□ 1.93
RAB35-204ENST00000540803 KIAA0232Q92628 1395 aa27.09■■□□□ 1.93
RAB35-204ENST00000540803 CPSF1Q10570 1443 aaKnown RBP27.08■■□□□ 1.93
RAB35-204ENST00000540803 MON2Q7Z3U7 1717 aa27.08■■□□□ 1.93
RAB35-204ENST00000540803 PRDM11Q9NQV5 511 aa27.08■■□□□ 1.93
RAB35-204ENST00000540803 ST20-MTHFSA0A0A6YYL1 179 aa27.07■■□□□ 1.92
RAB35-204ENST00000540803 TESK2Q96S53 571 aa27.07■■□□□ 1.92
RAB35-204ENST00000540803 ZNF692Q9BU19 519 aaPredicted RBP27.07■■□□□ 1.92
RAB35-204ENST00000540803 NLRP13Q86W25 1043 aa27.06■■□□□ 1.92
RAB35-204ENST00000540803 EP400Q96L91 3159 aa27.06■■□□□ 1.92
RAB35-204ENST00000540803 BRWD3Q6RI45 1802 aa27.05■■□□□ 1.92
RAB35-204ENST00000540803 ZC3H6P61129 1189 aaKnown RBP27.05■■□□□ 1.92
RAB35-204ENST00000540803 CHRNA2Q15822 529 aa27.04■■□□□ 1.92
RAB35-204ENST00000540803 CCDC9Q9Y3X0 531 aaKnown RBP27.04■■□□□ 1.92
RAB35-204ENST00000540803 CD163L1Q9NR16 1453 aa27.04■■□□□ 1.92
RAB35-204ENST00000540803 SLIT3O75094 1523 aa27.03■■□□□ 1.92
RAB35-204ENST00000540803 TTC21BQ7Z4L5 1316 aa27.03■■□□□ 1.92
RAB35-204ENST00000540803 USP47Q96K76 1375 aa27.03■■□□□ 1.92
RAB35-204ENST00000540803 CPDO75976 1380 aa27.02■■□□□ 1.92
RAB35-204ENST00000540803 KTN1Q86UP2 1357 aaKnown RBP27.01■■□□□ 1.91
RAB35-204ENST00000540803 GCP02774 474 aa27.01■■□□□ 1.91
RAB35-204ENST00000540803 NLRP6P59044 892 aa27.01■■□□□ 1.91
RAB35-204ENST00000540803 CCER1Q8TC90 406 aaPredicted RBP27.01■■□□□ 1.91
RAB35-204ENST00000540803 PUS7Q96PZ0 661 aaKnown RBP27.01■■□□□ 1.91
RAB35-204ENST00000540803 LMO7Q8WWI1 1683 aa27.01■■□□□ 1.91
RAB35-204ENST00000540803 TMC1Q8TDI8 760 aa26.99■■□□□ 1.91
RAB35-204ENST00000540803 TTC21AQ8NDW8 1320 aa26.98■■□□□ 1.91
RAB35-204ENST00000540803 ONECUT3O60422 494 aaPredicted RBP26.98■■□□□ 1.91
RAB35-204ENST00000540803 SLC12A5Q9H2X9 1139 aa26.97■■□□□ 1.91
RAB35-204ENST00000540803 CAMTA1Q9Y6Y1 1673 aa26.97■■□□□ 1.91
RAB35-204ENST00000540803 SPATA31A5Q5VU36 1347 aa26.96■■□□□ 1.91
RAB35-204ENST00000540803 SPATA31A7Q8IWB4 1347 aa26.96■■□□□ 1.91
RAB35-204ENST00000540803 SEPT12Q8IYM1 358 aa26.96■■□□□ 1.91
RAB35-204ENST00000540803 SLC24A1O60721 1099 aa26.95■■□□□ 1.9
RAB35-204ENST00000540803 USP54Q70EL1 1684 aa26.94■■□□□ 1.9
RAB35-204ENST00000540803 FAM98CQ17RN3 349 aaKnown RBP26.93■■□□□ 1.9
RAB35-204ENST00000540803 STRN4Q9NRL3 753 aa26.93■■□□□ 1.9
RAB35-204ENST00000540803 A0A1W2PP64 1363 aa26.93■■□□□ 1.9
RAB35-204ENST00000540803 HDGFL2Q7Z4V5 671 aaPredicted RBP26.92■■□□□ 1.9
RAB35-204ENST00000540803 COL18A1P39060 1754 aa26.92■■□□□ 1.9
RAB35-204ENST00000540803 NINLQ9Y2I6 1382 aa26.91■■□□□ 1.9
RAB35-204ENST00000540803 THSD7AQ9UPZ6 1657 aa26.91■■□□□ 1.9
RAB35-204ENST00000540803 SPATA31A1Q5TZJ5 1347 aa26.9■■□□□ 1.9
RAB35-204ENST00000540803 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.9■■□□□ 1.9
RAB35-204ENST00000540803 TERF2IPQ9NYB0 399 aa26.9■■□□□ 1.9
RAB35-204ENST00000540803 EDC4Q6P2E9 1401 aaKnown RBP26.9■■□□□ 1.9
RAB35-204ENST00000540803 TMF1P82094 1093 aa26.89■■□□□ 1.9
RAB35-204ENST00000540803 NFAT5O94916 1531 aa26.89■■□□□ 1.89
RAB35-204ENST00000540803 COL5A2P05997 1499 aaPredicted RBP26.88■■□□□ 1.89
RAB35-204ENST00000540803 USP31Q70CQ4 1352 aa26.88■■□□□ 1.89
RAB35-204ENST00000540803 EVA1CP58658 441 aa26.88■■□□□ 1.89
RAB35-204ENST00000540803 AATKQ6ZMQ8 1374 aa26.87■■□□□ 1.89
RAB35-204ENST00000540803 ZBTB7CA1YPR0 619 aa26.87■■□□□ 1.89
RAB35-204ENST00000540803 KCNH5Q8NCM2 988 aa26.87■■□□□ 1.89
RAB35-204ENST00000540803 ZRANB1Q9UGI0 708 aa26.87■■□□□ 1.89
RAB35-204ENST00000540803 A0A0G2JS52 829 aa26.86■■□□□ 1.89
RAB35-204ENST00000540803 MYT1Q01538 1121 aa26.86■■□□□ 1.89
RAB35-204ENST00000540803 LARP1Q6PKG0 1096 aaKnown RBP26.86■■□□□ 1.89
RAB35-204ENST00000540803 NME9Q86XW9 330 aa26.86■■□□□ 1.89
RAB35-204ENST00000540803 RGPD5Q99666 1765 aa26.85■■□□□ 1.89
RAB35-204ENST00000540803 KRT27Q7Z3Y8 459 aa26.85■■□□□ 1.89
RAB35-204ENST00000540803 SOX12O15370 315 aa26.84■■□□□ 1.89
RAB35-204ENST00000540803 ARHGEF25Q86VW2 580 aa26.84■■□□□ 1.89
RAB35-204ENST00000540803 USP35Q9P2H5 1018 aa26.82■■□□□ 1.88
RAB35-204ENST00000540803 ANKRD36BQ8N2N9 1353 aa26.81■■□□□ 1.88
RAB35-204ENST00000540803 LTN1O94822 1766 aa26.8■■□□□ 1.88
RAB35-204ENST00000540803 AXIN2Q9Y2T1 843 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms