RNA–Protein interactions for RNA: ENST00000540651.5

ARF1-213, Transcript of ADP ribosylation factor 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARF1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-213ENST00000540651 SSH2Q76I76 1423 aa30.65■■■□□ 2.5
ARF1-213ENST00000540651 NRKQ7Z2Y5 1582 aa30.65■■■□□ 2.5
ARF1-213ENST00000540651 LTBP4Q8N2S1 1624 aa30.63■■■□□ 2.49
ARF1-213ENST00000540651 NSD2O96028 1365 aa30.63■■■□□ 2.49
ARF1-213ENST00000540651 PPP2R1AP30153 589 aa30.63■■■□□ 2.49
ARF1-213ENST00000540651 NME9Q86XW9 330 aa30.63■■■□□ 2.49
ARF1-213ENST00000540651 TTC21BQ7Z4L5 1316 aa30.62■■■□□ 2.49
ARF1-213ENST00000540651 CADPS2Q86UW7 1296 aa30.62■■■□□ 2.49
ARF1-213ENST00000540651 MRS2Q9HD23 443 aa30.62■■■□□ 2.49
ARF1-213ENST00000540651 ZRANB1Q9UGI0 708 aa30.62■■■□□ 2.49
ARF1-213ENST00000540651 MORC1Q86VD1 984 aa30.61■■■□□ 2.49
ARF1-213ENST00000540651 NLRP13Q86W25 1043 aa30.59■■■□□ 2.49
ARF1-213ENST00000540651 KIF20BQ96Q89 1820 aa30.59■■■□□ 2.49
ARF1-213ENST00000540651 TNNT2P45379 298 aaPredicted RBP30.58■■■□□ 2.49
ARF1-213ENST00000540651 BRD4O60885 1362 aaPredicted RBP30.56■■■□□ 2.48
ARF1-213ENST00000540651 ANKRD26Q9UPS8 1709 aa30.55■■■□□ 2.48
ARF1-213ENST00000540651 FOXO3O43524 673 aa30.54■■■□□ 2.48
ARF1-213ENST00000540651 FBLN1P23142 703 aa30.49■■■□□ 2.47
ARF1-213ENST00000540651 XPCQ01831 940 aaPredicted RBP30.49■■■□□ 2.47
ARF1-213ENST00000540651 TTC21AQ8NDW8 1320 aa30.49■■■□□ 2.47
ARF1-213ENST00000540651 SLAIN2Q9P270 581 aa30.48■■■□□ 2.47
ARF1-213ENST00000540651 KIF1AQ12756 1690 aa30.48■■■□□ 2.47
ARF1-213ENST00000540651 PSME1Q06323 249 aa30.48■■■□□ 2.47
ARF1-213ENST00000540651 DDX17Q92841 729 aaKnown RBP30.48■■■□□ 2.47
ARF1-213ENST00000540651 PNISRQ8TF01 805 aaKnown RBP30.46■■■□□ 2.47
ARF1-213ENST00000540651 OVOS2A0A0J9YW53 1432 aa30.46■■■□□ 2.47
ARF1-213ENST00000540651 OVOS2Q6IE36 1432 aa30.46■■■□□ 2.47
ARF1-213ENST00000540651 PIK3C2AO00443 1686 aa30.46■■■□□ 2.47
ARF1-213ENST00000540651 BRINP3Q76B58 766 aa30.46■■■□□ 2.47
ARF1-213ENST00000540651 COG3Q96JB2 828 aa30.45■■■□□ 2.47
ARF1-213ENST00000540651 FAM9BQ8IZU0 186 aa30.44■■■□□ 2.46
ARF1-213ENST00000540651 PAK3O75914 559 aaPredicted RBP30.43■■■□□ 2.46
ARF1-213ENST00000540651 MTHFSP49914 203 aa30.43■■■□□ 2.46
ARF1-213ENST00000540651 USP31Q70CQ4 1352 aa30.42■■■□□ 2.46
ARF1-213ENST00000540651 KRT28Q7Z3Y7 464 aa30.42■■■□□ 2.46
ARF1-213ENST00000540651 NUTM2GQ5VZR2 741 aa30.41■■■□□ 2.46
ARF1-213ENST00000540651 TRPM3Q9HCF6 1732 aaPredicted RBP30.4■■■□□ 2.46
ARF1-213ENST00000540651 ABTB2Q8N961 1025 aa30.39■■■□□ 2.46
ARF1-213ENST00000540651 MARF1Q9Y4F3 1742 aaKnown RBP30.39■■■□□ 2.45
ARF1-213ENST00000540651 NLRP6P59044 892 aa30.37■■■□□ 2.45
ARF1-213ENST00000540651 POLKQ9UBT6 870 aa30.37■■■□□ 2.45
ARF1-213ENST00000540651 AATKQ6ZMQ8 1374 aa30.35■■■□□ 2.45
ARF1-213ENST00000540651 NPHP3Q7Z494 1330 aa30.35■■■□□ 2.45
ARF1-213ENST00000540651 PXDNQ92626 1479 aa30.34■■■□□ 2.45
ARF1-213ENST00000540651 EMILIN1Q9Y6C2 1016 aa30.34■■■□□ 2.45
ARF1-213ENST00000540651 USP54Q70EL1 1684 aa30.33■■■□□ 2.45
ARF1-213ENST00000540651 RRS1Q15050 365 aaKnown RBP30.33■■■□□ 2.45
ARF1-213ENST00000540651 MAP2P11137 1827 aaKnown RBP30.31■■■□□ 2.44
ARF1-213ENST00000540651 SOX12O15370 315 aa30.3■■■□□ 2.44
ARF1-213ENST00000540651 SMG6Q86US8 1419 aaKnown RBP30.28■■■□□ 2.44
ARF1-213ENST00000540651 ALS2Q96Q42 1657 aa30.28■■■□□ 2.44
ARF1-213ENST00000540651 COL3A1P02461 1466 aaPredicted RBP30.28■■■□□ 2.44
ARF1-213ENST00000540651 PNPLA6Q8IY17 1366 aa30.28■■■□□ 2.44
ARF1-213ENST00000540651 SBNO1A3KN83 1393 aa30.27■■■□□ 2.44
ARF1-213ENST00000540651 PPM1GO15355 546 aaPredicted RBP30.26■■■□□ 2.44
ARF1-213ENST00000540651 LMOD2Q6P5Q4 547 aa30.26■■■□□ 2.44
ARF1-213ENST00000540651 ADAMTS8Q9UP79 889 aa30.26■■■□□ 2.44
ARF1-213ENST00000540651 SHPRHQ149N8 1683 aa30.26■■■□□ 2.43
ARF1-213ENST00000540651 SOS2Q07890 1332 aaPredicted RBP30.26■■■□□ 2.43
ARF1-213ENST00000540651 SPATA31A3Q5VYP0 1347 aa30.23■■■□□ 2.43
ARF1-213ENST00000540651 CFAP53Q96M91 514 aa30.23■■■□□ 2.43
ARF1-213ENST00000540651 INSRP06213 1382 aa30.22■■■□□ 2.43
ARF1-213ENST00000540651 NHSL1Q5SYE7 1610 aa30.22■■■□□ 2.43
ARF1-213ENST00000540651 ROBO1Q9Y6N7 1651 aa30.22■■■□□ 2.43
ARF1-213ENST00000540651 TNS3Q68CZ2 1445 aa30.22■■■□□ 2.43
ARF1-213ENST00000540651 MAP3K19Q56UN5 1328 aa30.22■■■□□ 2.43
ARF1-213ENST00000540651 PEAK1Q9H792 1746 aa30.21■■■□□ 2.43
ARF1-213ENST00000540651 USP19O94966 1318 aa30.21■■■□□ 2.43
ARF1-213ENST00000540651 PLEKHG5O94827 1062 aa30.21■■■□□ 2.43
ARF1-213ENST00000540651 CDK12Q9NYV4 1490 aaPredicted RBP30.2■■■□□ 2.42
ARF1-213ENST00000540651 WDR43Q15061 677 aaKnown RBP eCLIP30.19■■■□□ 2.42
ARF1-213ENST00000540651 NFAT5O94916 1531 aa30.19■■■□□ 2.42
ARF1-213ENST00000540651 SLIT3O75094 1523 aa30.19■■■□□ 2.42
ARF1-213ENST00000540651 MED1Q15648 1581 aaPredicted RBP30.19■■■□□ 2.42
ARF1-213ENST00000540651 SENP3-EIF4A1A0A087X0R7 540 aa30.18■■■□□ 2.42
ARF1-213ENST00000540651 HNRNPUQ00839 825 aaKnown RBP eCLIP30.18■■■□□ 2.421e-6■□□□□ 8.3
ARF1-213ENST00000540651 GCP02774 474 aa30.15■■■□□ 2.42
ARF1-213ENST00000540651 DIAPH1O60610 1272 aaKnown RBP30.14■■■□□ 2.42
ARF1-213ENST00000540651 HSP90AB2PQ58FF8 381 aa30.14■■■□□ 2.42
ARF1-213ENST00000540651 BLMP54132 1417 aaPredicted RBP30.14■■■□□ 2.42
ARF1-213ENST00000540651 TOM1O60784 492 aa30.13■■■□□ 2.41
ARF1-213ENST00000540651 CABLES1Q8TDN4 633 aa30.13■■■□□ 2.41
ARF1-213ENST00000540651 IL13P35225 146 aa30.12■■■□□ 2.41
ARF1-213ENST00000540651 KCNH5Q8NCM2 988 aa30.12■■■□□ 2.41
ARF1-213ENST00000540651 CERKQ8TCT0 537 aa30.12■■■□□ 2.41
ARF1-213ENST00000540651 ARHGEF10O15013 1369 aa30.11■■■□□ 2.41
ARF1-213ENST00000540651 AHDC1Q5TGY3 1603 aaPredicted RBP30.1■■■□□ 2.41
ARF1-213ENST00000540651 UBAP1LF5GYI3 381 aa30.1■■■□□ 2.41
ARF1-213ENST00000540651 PIP4K2BP78356 416 aa30.1■■■□□ 2.41
ARF1-213ENST00000540651 IQSEC2Q5JU85 1478 aa30.09■■■□□ 2.41
ARF1-213ENST00000540651 SUPT16HQ9Y5B9 1047 aaKnown RBP30.09■■■□□ 2.41
ARF1-213ENST00000540651 FLT4P35916 1363 aa30.09■■■□□ 2.41
ARF1-213ENST00000540651 CRYBG1Q9Y4K1 1723 aa30.08■■■□□ 2.41
ARF1-213ENST00000540651 CCDC146Q8IYE0 955 aa30.08■■■□□ 2.41
ARF1-213ENST00000540651 U2SURPO15042 1029 aaKnown RBP30.08■■■□□ 2.41
ARF1-213ENST00000540651 U2AF1L5P0DN76 240 aaPredicted RBP30.08■■■□□ 2.41
ARF1-213ENST00000540651 HOXC9P31274 260 aa30.08■■■□□ 2.41
ARF1-213ENST00000540651 AMPHP49418 695 aa30.08■■■□□ 2.41
ARF1-213ENST00000540651 U2AF1Q01081 240 aaKnown RBP eCLIP30.08■■■□□ 2.41
ARF1-213ENST00000540651 EIF4A2Q14240 407 aaKnown RBP30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms