RNA–Protein interactions for RNA: ENST00000540240.1

C16orf62-212, Transcript of UPF0505 protein C16orf62, humanhuman

TSL 3

Gene C16orf62, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf62-212ENST00000540240 LTBP4Q8N2S1 1624 aa12.37□□□□□ -0.43
C16orf62-212ENST00000540240 NUDT18Q6ZVK8 323 aa12.37□□□□□ -0.43
C16orf62-212ENST00000540240 CCNB3Q8WWL7 1395 aa12.37□□□□□ -0.43
C16orf62-212ENST00000540240 SYCP2Q9BX26 1530 aa12.37□□□□□ -0.43
C16orf62-212ENST00000540240 NBPF26B4DH59 902 aa12.36□□□□□ -0.43
C16orf62-212ENST00000540240 SOCS7O14512 581 aa12.36□□□□□ -0.43
C16orf62-212ENST00000540240 CAMSAP1Q5T5Y3 1602 aa12.36□□□□□ -0.43
C16orf62-212ENST00000540240 ATP7AQ04656 1500 aa12.36□□□□□ -0.43
C16orf62-212ENST00000540240 A2MP01023 1474 aa12.35□□□□□ -0.43
C16orf62-212ENST00000540240 SUPT6HQ7KZ85 1726 aaKnown RBP12.34□□□□□ -0.43
C16orf62-212ENST00000540240 MTUS2Q5JR59 1369 aa12.34□□□□□ -0.43
C16orf62-212ENST00000540240 GGT6Q6P531 493 aa12.34□□□□□ -0.43
C16orf62-212ENST00000540240 PLA2R1Q13018 1463 aa12.34□□□□□ -0.43
C16orf62-212ENST00000540240 ILDR2Q71H61 639 aa12.33□□□□□ -0.44
C16orf62-212ENST00000540240 MTRQ99707 1265 aa12.33□□□□□ -0.44
C16orf62-212ENST00000540240 NPDC1Q9NQX5 325 aaPredicted RBP12.33□□□□□ -0.44
C16orf62-212ENST00000540240 PLXNC1O60486 1568 aa12.32□□□□□ -0.44
C16orf62-212ENST00000540240 INO80Q9ULG1 1556 aaPredicted RBP12.32□□□□□ -0.44
C16orf62-212ENST00000540240 PTPRKQ15262 1439 aa12.32□□□□□ -0.44
C16orf62-212ENST00000540240 CLTCQ00610 1675 aaKnown RBP12.32□□□□□ -0.44
C16orf62-212ENST00000540240 RNF40O75150 1001 aa12.31□□□□□ -0.44
C16orf62-212ENST00000540240 PADI6Q6TGC4 694 aa12.31□□□□□ -0.44
C16orf62-212ENST00000540240 Q6ZNB5 142 aa12.31□□□□□ -0.44
C16orf62-212ENST00000540240 ZNF516Q92618 1163 aa12.31□□□□□ -0.44
C16orf62-212ENST00000540240 ADGBQ8N7X0 1667 aa12.31□□□□□ -0.44
C16orf62-212ENST00000540240 RTEL1-TNFRSF6BF6WH68 1400 aa12.3□□□□□ -0.44
C16orf62-212ENST00000540240 ZNF142P52746 1687 aaPredicted RBP12.3□□□□□ -0.44
C16orf62-212ENST00000540240 APLP1P51693 650 aa12.3□□□□□ -0.44
C16orf62-212ENST00000540240 RSPH4AQ5TD94 716 aa12.3□□□□□ -0.44
C16orf62-212ENST00000540240 TTC13Q8NBP0 860 aa12.3□□□□□ -0.44
C16orf62-212ENST00000540240 SPATA31D1Q6ZQQ2 1576 aa12.3□□□□□ -0.44
C16orf62-212ENST00000540240 UBAP1LF5GYI3 381 aa12.29□□□□□ -0.44
C16orf62-212ENST00000540240 RBM27Q9P2N5 1060 aaKnown RBP12.29□□□□□ -0.44
C16orf62-212ENST00000540240 CEP170BQ9Y4F5 1589 aaPredicted RBP12.29□□□□□ -0.44
C16orf62-212ENST00000540240 ZNF335Q9H4Z2 1342 aaPredicted RBP12.29□□□□□ -0.44
C16orf62-212ENST00000540240 MYO3AQ8NEV4 1616 aa12.29□□□□□ -0.44
C16orf62-212ENST00000540240 TCOF1Q13428 1488 aaKnown RBP12.28□□□□□ -0.44
C16orf62-212ENST00000540240 IL21Q9HBE4 155 aa12.28□□□□□ -0.44
C16orf62-212ENST00000540240 DHX29Q7Z478 1369 aaKnown RBP12.28□□□□□ -0.44
C16orf62-212ENST00000540240 SWT1Q5T5J6 900 aaKnown RBP12.27□□□□□ -0.45
C16orf62-212ENST00000540240 A2ML1A8K2U0 1454 aa12.27□□□□□ -0.45
C16orf62-212ENST00000540240 MBD5Q9P267 1494 aa12.27□□□□□ -0.45
C16orf62-212ENST00000540240 PPP1R18Q6NYC8 613 aa12.26□□□□□ -0.45
C16orf62-212ENST00000540240 ZNF644Q9H582 1327 aaPredicted RBP12.26□□□□□ -0.45
C16orf62-212ENST00000540240 EHBP1L1Q8N3D4 1523 aa12.26□□□□□ -0.45
C16orf62-212ENST00000540240 KIF3BO15066 747 aa12.25□□□□□ -0.45
C16orf62-212ENST00000540240 MLLT3P42568 568 aaPredicted RBP12.25□□□□□ -0.45
C16orf62-212ENST00000540240 NKX2-3Q8TAU0 364 aa12.25□□□□□ -0.45
C16orf62-212ENST00000540240 CEP162Q5TB80 1403 aa12.25□□□□□ -0.45
C16orf62-212ENST00000540240 FAM135AQ9P2D6 1515 aa12.25□□□□□ -0.45
C16orf62-212ENST00000540240 LCE2BO14633 110 aa12.24□□□□□ -0.45
C16orf62-212ENST00000540240 TIAM1Q13009 1591 aa12.24□□□□□ -0.45
C16orf62-212ENST00000540240 PRKD2Q9BZL6 878 aa12.24□□□□□ -0.45
C16orf62-212ENST00000540240 DNMT1P26358 1616 aaKnown RBP12.23□□□□□ -0.45
C16orf62-212ENST00000540240 TOM1O60784 492 aa12.23□□□□□ -0.45
C16orf62-212ENST00000540240 THEMISQ8N1K5 641 aaPredicted RBP12.23□□□□□ -0.45
C16orf62-212ENST00000540240 TSHZ2Q9NRE2 1034 aa12.23□□□□□ -0.45
C16orf62-212ENST00000540240 TNRQ92752 1358 aa12.22□□□□□ -0.45
C16orf62-212ENST00000540240 WASHC2CQ9Y4E1 1318 aa12.22□□□□□ -0.45
C16orf62-212ENST00000540240 TSPY4P0CV99 314 aa12.22□□□□□ -0.45
C16orf62-212ENST00000540240 TSPY10P0CW01 314 aa12.22□□□□□ -0.45
C16orf62-212ENST00000540240 HDGFP51858 240 aaKnown RBP12.22□□□□□ -0.45
C16orf62-212ENST00000540240 ANKLE2Q86XL3 938 aa12.22□□□□□ -0.45
C16orf62-212ENST00000540240 GFRA3O60609 400 aa12.21□□□□□ -0.45
C16orf62-212ENST00000540240 EYA1Q99502 592 aa12.21□□□□□ -0.45
C16orf62-212ENST00000540240 CPS1P31327 1500 aa12.21□□□□□ -0.46
C16orf62-212ENST00000540240 PZPP20742 1482 aa12.21□□□□□ -0.46
C16orf62-212ENST00000540240 CCDC141Q6ZP82 1450 aa12.21□□□□□ -0.46
C16orf62-212ENST00000540240 COPS2P61201 443 aa12.2□□□□□ -0.46
C16orf62-212ENST00000540240 FBXO31Q5XUX0 539 aaPredicted RBP12.2□□□□□ -0.46
C16orf62-212ENST00000540240 KDM5DQ9BY66 1539 aa12.2□□□□□ -0.46
C16orf62-212ENST00000540240 MIA2Q96PC5 1412 aa12.19□□□□□ -0.46
C16orf62-212ENST00000540240 KCNV2Q8TDN2 545 aa12.18□□□□□ -0.46
C16orf62-212ENST00000540240 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.18□□□□□ -0.46
C16orf62-212ENST00000540240 NLRP1Q9C000 1473 aa12.18□□□□□ -0.46
C16orf62-212ENST00000540240 SHANK2Q9UPX8 1470 aa12.18□□□□□ -0.46
C16orf62-212ENST00000540240 POLR1AO95602 1720 aaPredicted RBP12.17□□□□□ -0.46
C16orf62-212ENST00000540240 CAMSAP2Q08AD1 1489 aa12.17□□□□□ -0.46
C16orf62-212ENST00000540240 NCOA2Q15596 1464 aa12.17□□□□□ -0.46
C16orf62-212ENST00000540240 PIP4K2BP78356 416 aa12.16□□□□□ -0.46
C16orf62-212ENST00000540240 SLF2Q8IX21 1173 aa12.16□□□□□ -0.46
C16orf62-212ENST00000540240 ARHGEF5Q12774 1597 aa12.16□□□□□ -0.46
C16orf62-212ENST00000540240 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.16□□□□□ -0.46
C16orf62-212ENST00000540240 UGGT1Q9NYU2 1555 aa12.15□□□□□ -0.46
C16orf62-212ENST00000540240 HSPA1LP34931 641 aa12.15□□□□□ -0.46
C16orf62-212ENST00000540240 LAPTM4AQ15012 233 aa12.15□□□□□ -0.46
C16orf62-212ENST00000540240 DEPDC5O75140 1603 aa12.15□□□□□ -0.47
C16orf62-212ENST00000540240 MED14O60244 1454 aa12.14□□□□□ -0.47
C16orf62-212ENST00000540240 NEURL4Q96JN8 1562 aa12.14□□□□□ -0.47
C16orf62-212ENST00000540240 NPHP4O75161 1426 aaPredicted RBP12.14□□□□□ -0.47
C16orf62-212ENST00000540240 ARHGEF1Q92888 912 aaKnown RBP12.14□□□□□ -0.47
C16orf62-212ENST00000540240 PTGDRQ13258 359 aa12.12□□□□□ -0.47
C16orf62-212ENST00000540240 V9GY48 417 aaPredicted RBP12.12□□□□□ -0.47
C16orf62-212ENST00000540240 ZC3H13Q5T200 1668 aaKnown RBP12.11□□□□□ -0.47
C16orf62-212ENST00000540240 TRAF7Q6Q0C0 670 aa12.11□□□□□ -0.47
C16orf62-212ENST00000540240 VWDEQ8N2E2 1590 aa12.1□□□□□ -0.47
C16orf62-212ENST00000540240 MAST1Q9Y2H9 1570 aa12.1□□□□□ -0.47
C16orf62-212ENST00000540240 FAM161AQ3B820 660 aa12.1□□□□□ -0.47
C16orf62-212ENST00000540240 RNF17Q9BXT8 1623 aaKnown RBP12.09□□□□□ -0.47
C16orf62-212ENST00000540240 EIF2AK4Q9P2K8 1649 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms