RNA–Protein interactions for RNA: ENST00000540029.5

EPB42-203, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 2 BASIC

Gene EPB42, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-203ENST00000540029 MST1RQ04912 1400 aa18.76■□□□□ 0.59
EPB42-203ENST00000540029 SSH2Q76I76 1423 aa18.76■□□□□ 0.59
EPB42-203ENST00000540029 NGDNQ8NEJ9 315 aaKnown RBP18.75■□□□□ 0.59
EPB42-203ENST00000540029 ZNF692Q9BU19 519 aaPredicted RBP18.75■□□□□ 0.59
EPB42-203ENST00000540029 MORC1Q86VD1 984 aa18.75■□□□□ 0.59
EPB42-203ENST00000540029 NLRP13Q86W25 1043 aa18.75■□□□□ 0.59
EPB42-203ENST00000540029 PHF8Q9UPP1 1060 aa18.75■□□□□ 0.59
EPB42-203ENST00000540029 DCCP43146 1447 aa18.74■□□□□ 0.59
EPB42-203ENST00000540029 NSD2O96028 1365 aa18.74■□□□□ 0.59
EPB42-203ENST00000540029 ANKRD26Q9UPS8 1709 aa18.73■□□□□ 0.59
EPB42-203ENST00000540029 BRD4O60885 1362 aaPredicted RBP18.73■□□□□ 0.59
EPB42-203ENST00000540029 TTC21BQ7Z4L5 1316 aa18.73■□□□□ 0.59
EPB42-203ENST00000540029 ATF3P18847 181 aa18.73■□□□□ 0.59
EPB42-203ENST00000540029 MSH6P52701 1360 aa18.73■□□□□ 0.59
EPB42-203ENST00000540029 FBLN1P23142 703 aa18.72■□□□□ 0.59
EPB42-203ENST00000540029 LTBP4Q8N2S1 1624 aa18.71■□□□□ 0.59
EPB42-203ENST00000540029 CADPS2Q86UW7 1296 aa18.7■□□□□ 0.58
EPB42-203ENST00000540029 FAM9BQ8IZU0 186 aa18.7■□□□□ 0.58
EPB42-203ENST00000540029 FOXO3O43524 673 aa18.69■□□□□ 0.58
EPB42-203ENST00000540029 AEBP2Q6ZN18 517 aaPredicted RBP18.69■□□□□ 0.58
EPB42-203ENST00000540029 PNISRQ8TF01 805 aaKnown RBP18.69■□□□□ 0.58
EPB42-203ENST00000540029 TSHZ2Q9NRE2 1034 aa18.69■□□□□ 0.58
EPB42-203ENST00000540029 XPCQ01831 940 aaPredicted RBP18.69■□□□□ 0.58
EPB42-203ENST00000540029 PIK3C2AO00443 1686 aa18.68■□□□□ 0.58
EPB42-203ENST00000540029 FKBP8Q14318 412 aa18.68■□□□□ 0.58
EPB42-203ENST00000540029 DDX17Q92841 729 aaKnown RBP18.68■□□□□ 0.58
EPB42-203ENST00000540029 OVOS2A0A0J9YW53 1432 aa18.66■□□□□ 0.58
EPB42-203ENST00000540029 OVOS2Q6IE36 1432 aa18.66■□□□□ 0.58
EPB42-203ENST00000540029 MTHFSP49914 203 aa18.64■□□□□ 0.57
EPB42-203ENST00000540029 MARF1Q9Y4F3 1742 aaKnown RBP18.64■□□□□ 0.57
EPB42-203ENST00000540029 KIF1AQ12756 1690 aa18.64■□□□□ 0.57
EPB42-203ENST00000540029 TTC21AQ8NDW8 1320 aa18.64■□□□□ 0.57
EPB42-203ENST00000540029 PSME1Q06323 249 aa18.64■□□□□ 0.57
EPB42-203ENST00000540029 NUTM2GQ5VZR2 741 aa18.64■□□□□ 0.57
EPB42-203ENST00000540029 PAK3O75914 559 aaPredicted RBP18.63■□□□□ 0.57
EPB42-203ENST00000540029 COG3Q96JB2 828 aa18.63■□□□□ 0.57
EPB42-203ENST00000540029 BRINP3Q76B58 766 aa18.62■□□□□ 0.57
EPB42-203ENST00000540029 SLAIN2Q9P270 581 aa18.62■□□□□ 0.57
EPB42-203ENST00000540029 TRPM3Q9HCF6 1732 aaPredicted RBP18.62■□□□□ 0.57
EPB42-203ENST00000540029 MAP2P11137 1827 aaKnown RBP18.6■□□□□ 0.57
EPB42-203ENST00000540029 SENP3-EIF4A1A0A087X0R7 540 aa18.6■□□□□ 0.57
EPB42-203ENST00000540029 POLKQ9UBT6 870 aa18.6■□□□□ 0.57
EPB42-203ENST00000540029 USP31Q70CQ4 1352 aa18.6■□□□□ 0.57
EPB42-203ENST00000540029 RRS1Q15050 365 aaKnown RBP18.59■□□□□ 0.57
EPB42-203ENST00000540029 KRT28Q7Z3Y7 464 aa18.59■□□□□ 0.57
EPB42-203ENST00000540029 ABTB2Q8N961 1025 aa18.59■□□□□ 0.57
EPB42-203ENST00000540029 EMILIN1Q9Y6C2 1016 aa18.59■□□□□ 0.57
EPB42-203ENST00000540029 SOX12O15370 315 aa18.59■□□□□ 0.57
EPB42-203ENST00000540029 NLRP6P59044 892 aa18.59■□□□□ 0.57
EPB42-203ENST00000540029 SHPRHQ149N8 1683 aa18.58■□□□□ 0.57
EPB42-203ENST00000540029 NEFLP07196 543 aa18.58■□□□□ 0.57
EPB42-203ENST00000540029 COL3A1P02461 1466 aaPredicted RBP18.57■□□□□ 0.56
EPB42-203ENST00000540029 AATKQ6ZMQ8 1374 aa18.57■□□□□ 0.56
EPB42-203ENST00000540029 USP54Q70EL1 1684 aa18.57■□□□□ 0.56
EPB42-203ENST00000540029 PXDNQ92626 1479 aa18.56■□□□□ 0.56
EPB42-203ENST00000540029 ADAMTS8Q9UP79 889 aa18.56■□□□□ 0.56
EPB42-203ENST00000540029 PPM1GO15355 546 aaPredicted RBP18.55■□□□□ 0.56
EPB42-203ENST00000540029 SMG6Q86US8 1419 aaKnown RBP18.55■□□□□ 0.56
EPB42-203ENST00000540029 ALS2Q96Q42 1657 aa18.54■□□□□ 0.56
EPB42-203ENST00000540029 PNPLA6Q8IY17 1366 aa18.54■□□□□ 0.56
EPB42-203ENST00000540029 PEAK1Q9H792 1746 aa18.54■□□□□ 0.56
EPB42-203ENST00000540029 HNRNPUQ00839 825 aaKnown RBP eCLIP18.54■□□□□ 0.56
EPB42-203ENST00000540029 NPHP3Q7Z494 1330 aa18.54■□□□□ 0.56
EPB42-203ENST00000540029 PLEKHG5O94827 1062 aa18.53■□□□□ 0.56
EPB42-203ENST00000540029 LMOD2Q6P5Q4 547 aa18.52■□□□□ 0.56
EPB42-203ENST00000540029 MAP3K19Q56UN5 1328 aa18.51■□□□□ 0.55
EPB42-203ENST00000540029 WDR43Q15061 677 aaKnown RBP eCLIP18.5■□□□□ 0.55
EPB42-203ENST00000540029 BLMP54132 1417 aaPredicted RBP18.5■□□□□ 0.55
EPB42-203ENST00000540029 NFAT5O94916 1531 aa18.5■□□□□ 0.55
EPB42-203ENST00000540029 CFAP53Q96M91 514 aa18.5■□□□□ 0.55
EPB42-203ENST00000540029 INSRP06213 1382 aa18.49■□□□□ 0.55
EPB42-203ENST00000540029 CDK12Q9NYV4 1490 aaPredicted RBP18.49■□□□□ 0.55
EPB42-203ENST00000540029 SBNO1A3KN83 1393 aa18.49■□□□□ 0.55
EPB42-203ENST00000540029 MED1Q15648 1581 aaPredicted RBP18.49■□□□□ 0.55
EPB42-203ENST00000540029 ROBO1Q9Y6N7 1651 aa18.49■□□□□ 0.55
EPB42-203ENST00000540029 NHSL1Q5SYE7 1610 aa18.48■□□□□ 0.55
EPB42-203ENST00000540029 TNS3Q68CZ2 1445 aa18.48■□□□□ 0.55
EPB42-203ENST00000540029 SOS2Q07890 1332 aaPredicted RBP18.48■□□□□ 0.55
EPB42-203ENST00000540029 SPATA31A3Q5VYP0 1347 aa18.48■□□□□ 0.55
EPB42-203ENST00000540029 USP19O94966 1318 aa18.47■□□□□ 0.55
EPB42-203ENST00000540029 HSP90AB2PQ58FF8 381 aa18.47■□□□□ 0.55
EPB42-203ENST00000540029 CCDC146Q8IYE0 955 aa18.47■□□□□ 0.55
EPB42-203ENST00000540029 SLIT3O75094 1523 aa18.47■□□□□ 0.55
EPB42-203ENST00000540029 DIAPH1O60610 1272 aaKnown RBP18.45■□□□□ 0.54
EPB42-203ENST00000540029 CABLES1Q8TDN4 633 aa18.45■□□□□ 0.54
EPB42-203ENST00000540029 GCP02774 474 aa18.45■□□□□ 0.54
EPB42-203ENST00000540029 IL13P35225 146 aa18.45■□□□□ 0.54
EPB42-203ENST00000540029 LTN1O94822 1766 aa18.44■□□□□ 0.54
EPB42-203ENST00000540029 U2SURPO15042 1029 aaKnown RBP18.44■□□□□ 0.54
EPB42-203ENST00000540029 U2AF1L5P0DN76 240 aaPredicted RBP18.43■□□□□ 0.54
EPB42-203ENST00000540029 U2AF1Q01081 240 aaKnown RBP eCLIP18.43■□□□□ 0.54
EPB42-203ENST00000540029 CRYBG1Q9Y4K1 1723 aa18.43■□□□□ 0.54
EPB42-203ENST00000540029 EIF4A2Q14240 407 aaKnown RBP18.42■□□□□ 0.54
EPB42-203ENST00000540029 SALL2Q9Y467 1007 aaPredicted RBP18.42■□□□□ 0.54
EPB42-203ENST00000540029 FLT4P35916 1363 aa18.42■□□□□ 0.54
EPB42-203ENST00000540029 PHRF1Q9P1Y6 1649 aaKnown RBP18.41■□□□□ 0.54
EPB42-203ENST00000540029 HOXC9P31274 260 aa18.41■□□□□ 0.54
EPB42-203ENST00000540029 ZBED9Q6R2W3 1325 aa18.41■□□□□ 0.54
EPB42-203ENST00000540029 AMPHP49418 695 aa18.4■□□□□ 0.54
EPB42-203ENST00000540029 PIP4K2BP78356 416 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms