RNA–Protein interactions for RNA: ENST00000539928.1

PHC1-207, Transcript of polyhomeotic homolog 1, humanhuman

TSL 4

Gene PHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-207ENST00000539928 CDK19Q9BWU1 502 aa13.31□□□□□ -0.28
PHC1-207ENST00000539928 ATP7BP35670 1465 aa13.3□□□□□ -0.28
PHC1-207ENST00000539928 VPS72Q15906 364 aa13.3□□□□□ -0.28
PHC1-207ENST00000539928 NWD2Q9ULI1 1742 aa13.3□□□□□ -0.28
PHC1-207ENST00000539928 CCDC9Q9Y3X0 531 aaKnown RBP13.29□□□□□ -0.28
PHC1-207ENST00000539928 ITSN1Q15811 1721 aa13.29□□□□□ -0.28
PHC1-207ENST00000539928 BRWD3Q6RI45 1802 aa13.27□□□□□ -0.28
PHC1-207ENST00000539928 C1QBPQ07021 282 aaKnown RBP13.27□□□□□ -0.29
PHC1-207ENST00000539928 SEPT12Q8IYM1 358 aa13.27□□□□□ -0.29
PHC1-207ENST00000539928 L3MBTL2Q969R5 705 aa13.27□□□□□ -0.29
PHC1-207ENST00000539928 SIN3AQ96ST3 1273 aa13.27□□□□□ -0.29
PHC1-207ENST00000539928 BTG4Q9NY30 223 aa13.27□□□□□ -0.29
PHC1-207ENST00000539928 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
PHC1-207ENST00000539928 CRYBG1Q9Y4K1 1723 aa13.25□□□□□ -0.29
PHC1-207ENST00000539928 TOPAZ1Q8N9V7 1692 aa13.25□□□□□ -0.29
PHC1-207ENST00000539928 ACEP12821 1306 aa13.25□□□□□ -0.29
PHC1-207ENST00000539928 CENPJQ9HC77 1338 aaPredicted RBP13.25□□□□□ -0.29
PHC1-207ENST00000539928 ONECUT3O60422 494 aaPredicted RBP13.25□□□□□ -0.29
PHC1-207ENST00000539928 NBPF8Q3BBV2 869 aa13.25□□□□□ -0.29
PHC1-207ENST00000539928 NUTM2GQ5VZR2 741 aa13.25□□□□□ -0.29
PHC1-207ENST00000539928 CCDC125Q86Z20 511 aa13.25□□□□□ -0.29
PHC1-207ENST00000539928 CNKSR2Q8WXI2 1034 aa13.25□□□□□ -0.29
PHC1-207ENST00000539928 COL14A1Q05707 1796 aaKnown RBP13.25□□□□□ -0.29
PHC1-207ENST00000539928 NRAPQ86VF7 1730 aa13.25□□□□□ -0.29
PHC1-207ENST00000539928 POLR3AO14802 1390 aaPredicted RBP13.24□□□□□ -0.29
PHC1-207ENST00000539928 PLEKHG3A1L390 1219 aa13.24□□□□□ -0.29
PHC1-207ENST00000539928 SRPK2P78362 688 aaKnown RBP13.24□□□□□ -0.29
PHC1-207ENST00000539928 NEUROD1Q13562 356 aa13.24□□□□□ -0.29
PHC1-207ENST00000539928 PRDM11Q9NQV5 511 aa13.24□□□□□ -0.29
PHC1-207ENST00000539928 RNF216Q9NWF9 866 aaPredicted RBP13.24□□□□□ -0.29
PHC1-207ENST00000539928 CABP2Q9NPB3 220 aa13.23□□□□□ -0.29
PHC1-207ENST00000539928 EP400Q96L91 3159 aa13.22□□□□□ -0.29
PHC1-207ENST00000539928 A0A0G2JS52 829 aa13.22□□□□□ -0.29
PHC1-207ENST00000539928 MYT1Q01538 1121 aa13.22□□□□□ -0.29
PHC1-207ENST00000539928 FAM98CQ17RN3 349 aaKnown RBP13.22□□□□□ -0.29
PHC1-207ENST00000539928 KRT27Q7Z3Y8 459 aa13.22□□□□□ -0.29
PHC1-207ENST00000539928 QRICH2Q9H0J4 1663 aa13.21□□□□□ -0.29
PHC1-207ENST00000539928 KIAA0232Q92628 1395 aa13.21□□□□□ -0.29
PHC1-207ENST00000539928 ZC3H6P61129 1189 aaKnown RBP13.21□□□□□ -0.29
PHC1-207ENST00000539928 CHRNA2Q15822 529 aa13.21□□□□□ -0.29
PHC1-207ENST00000539928 BLMP54132 1417 aaPredicted RBP13.21□□□□□ -0.3
PHC1-207ENST00000539928 PPIP5K1Q6PFW1 1433 aa13.21□□□□□ -0.3
PHC1-207ENST00000539928 PHRF1Q9P1Y6 1649 aaKnown RBP13.21□□□□□ -0.3
PHC1-207ENST00000539928 SPATA31A5Q5VU36 1347 aa13.2□□□□□ -0.3
PHC1-207ENST00000539928 SPATA31A7Q8IWB4 1347 aa13.2□□□□□ -0.3
PHC1-207ENST00000539928 ABTB2Q8N961 1025 aa13.2□□□□□ -0.3
PHC1-207ENST00000539928 DEFB132Q7Z7B7 95 aa13.19□□□□□ -0.3
PHC1-207ENST00000539928 ZRANB1Q9UGI0 708 aa13.19□□□□□ -0.3
PHC1-207ENST00000539928 TRPM1Q7Z4N2 1603 aa13.19□□□□□ -0.3
PHC1-207ENST00000539928 STRN4Q9NRL3 753 aa13.18□□□□□ -0.3
PHC1-207ENST00000539928 CABP1Q9NZU7 370 aa13.18□□□□□ -0.3
PHC1-207ENST00000539928 SF3B2Q13435 895 aaKnown RBP13.17□□□□□ -0.3
PHC1-207ENST00000539928 ROCK2O75116 1388 aaKnown RBP13.17□□□□□ -0.3
PHC1-207ENST00000539928 FAM182BQ5T319 152 aa13.16□□□□□ -0.3
PHC1-207ENST00000539928 NRKQ7Z2Y5 1582 aa13.15□□□□□ -0.3
PHC1-207ENST00000539928 USP19O94966 1318 aa13.15□□□□□ -0.3
PHC1-207ENST00000539928 SPATA31A1Q5TZJ5 1347 aa13.15□□□□□ -0.3
PHC1-207ENST00000539928 EVC2Q86UK5 1308 aa13.15□□□□□ -0.3
PHC1-207ENST00000539928 EVA1CP58658 441 aa13.15□□□□□ -0.3
PHC1-207ENST00000539928 NLRP13Q86W25 1043 aa13.15□□□□□ -0.3
PHC1-207ENST00000539928 USP6P35125 1406 aa13.14□□□□□ -0.31
PHC1-207ENST00000539928 GCP02774 474 aa13.14□□□□□ -0.31
PHC1-207ENST00000539928 USP35Q9P2H5 1018 aa13.14□□□□□ -0.31
PHC1-207ENST00000539928 CPDO75976 1380 aa13.14□□□□□ -0.31
PHC1-207ENST00000539928 THSD7AQ9UPZ6 1657 aa13.14□□□□□ -0.31
PHC1-207ENST00000539928 CAMTA1Q9Y6Y1 1673 aa13.14□□□□□ -0.31
PHC1-207ENST00000539928 BRD4O60885 1362 aaPredicted RBP13.13□□□□□ -0.31
PHC1-207ENST00000539928 NLRP6P59044 892 aa13.13□□□□□ -0.31
PHC1-207ENST00000539928 SSH2Q76I76 1423 aa13.13□□□□□ -0.31
PHC1-207ENST00000539928 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
PHC1-207ENST00000539928 LMO7Q8WWI1 1683 aa13.12□□□□□ -0.31
PHC1-207ENST00000539928 ZBTB7CA1YPR0 619 aa13.11□□□□□ -0.31
PHC1-207ENST00000539928 BAG6P46379 1132 aa13.1□□□□□ -0.31
PHC1-207ENST00000539928 PIK3C2AO00443 1686 aa13.09□□□□□ -0.31
PHC1-207ENST00000539928 BARGINQ6ZT62 677 aa13.09□□□□□ -0.31
PHC1-207ENST00000539928 CARD11Q9BXL7 1154 aa13.09□□□□□ -0.31
PHC1-207ENST00000539928 SLIT3O75094 1523 aa13.08□□□□□ -0.31
PHC1-207ENST00000539928 TONSLQ96HA7 1378 aa13.08□□□□□ -0.31
PHC1-207ENST00000539928 RGPD1P0DJD0 1748 aa13.08□□□□□ -0.32
PHC1-207ENST00000539928 EN1Q05925 392 aaPredicted RBP13.08□□□□□ -0.32
PHC1-207ENST00000539928 TCP11L2Q8N4U5 519 aa13.08□□□□□ -0.32
PHC1-207ENST00000539928 ZNF692Q9BU19 519 aaPredicted RBP13.08□□□□□ -0.32
PHC1-207ENST00000539928 COL5A2P05997 1499 aaPredicted RBP13.08□□□□□ -0.32
PHC1-207ENST00000539928 TTC21BQ7Z4L5 1316 aa13.08□□□□□ -0.32
PHC1-207ENST00000539928 AKAP12Q02952 1782 aa13.07□□□□□ -0.32
PHC1-207ENST00000539928 FAM196AQ6ZSG2 479 aa13.07□□□□□ -0.32
PHC1-207ENST00000539928 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
PHC1-207ENST00000539928 CPSF1Q10570 1443 aaKnown RBP13.06□□□□□ -0.32
PHC1-207ENST00000539928 TNS1Q9HBL0 1735 aaKnown RBP13.06□□□□□ -0.32
PHC1-207ENST00000539928 TRIM37O94972 964 aa13.06□□□□□ -0.32
PHC1-207ENST00000539928 PDE3BQ13370 1112 aa13.06□□□□□ -0.32
PHC1-207ENST00000539928 SRCAPQ6ZRS2 3230 aa13.06□□□□□ -0.32
PHC1-207ENST00000539928 KTN1Q86UP2 1357 aaKnown RBP13.06□□□□□ -0.32
PHC1-207ENST00000539928 SBNO2Q9Y2G9 1366 aa13.06□□□□□ -0.32
PHC1-207ENST00000539928 PSDA5PKW4 1024 aaPredicted RBP13.05□□□□□ -0.32
PHC1-207ENST00000539928 SOX12O15370 315 aa13.05□□□□□ -0.32
PHC1-207ENST00000539928 AXIN2Q9Y2T1 843 aa13.05□□□□□ -0.32
PHC1-207ENST00000539928 THRAP3Q9Y2W1 955 aaKnown RBP13.05□□□□□ -0.32
PHC1-207ENST00000539928 TTC21AQ8NDW8 1320 aa13.05□□□□□ -0.32
PHC1-207ENST00000539928 CRB1P82279 1406 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms