RNA–Protein interactions for RNA: ENST00000539191.1

NPIPB4-210, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 305 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-210ENST00000539191 DCAF11Q8TEB1 546 aa12.2□□□□□ -0.46
NPIPB4-210ENST00000539191 ARHGEF10O15013 1369 aa12.19□□□□□ -0.46
NPIPB4-210ENST00000539191 CCDC125Q86Z20 511 aa12.19□□□□□ -0.46
NPIPB4-210ENST00000539191 TULP4Q9NRJ4 1543 aa12.19□□□□□ -0.46
NPIPB4-210ENST00000539191 RGPD1P0DJD0 1748 aa12.19□□□□□ -0.46
NPIPB4-210ENST00000539191 ACIN1Q9UKV3 1341 aaKnown RBP12.18□□□□□ -0.46
NPIPB4-210ENST00000539191 ITSN1Q15811 1721 aa12.18□□□□□ -0.46
NPIPB4-210ENST00000539191 SF3B2Q13435 895 aaKnown RBP12.18□□□□□ -0.46
NPIPB4-210ENST00000539191 THSD7AQ9UPZ6 1657 aa12.18□□□□□ -0.46
NPIPB4-210ENST00000539191 ANKARQ7Z5J8 1434 aa12.18□□□□□ -0.46
NPIPB4-210ENST00000539191 ZC3H6P61129 1189 aaKnown RBP12.17□□□□□ -0.46
NPIPB4-210ENST00000539191 NGDNQ8NEJ9 315 aaKnown RBP12.17□□□□□ -0.46
NPIPB4-210ENST00000539191 SIRT1Q96EB6 747 aa12.17□□□□□ -0.46
NPIPB4-210ENST00000539191 STRN4Q9NRL3 753 aa12.17□□□□□ -0.46
NPIPB4-210ENST00000539191 USP35Q9P2H5 1018 aa12.17□□□□□ -0.46
NPIPB4-210ENST00000539191 LRP5O75197 1615 aa12.17□□□□□ -0.46
NPIPB4-210ENST00000539191 ATP7BP35670 1465 aa12.16□□□□□ -0.46
NPIPB4-210ENST00000539191 WASLO00401 505 aaPredicted RBP12.16□□□□□ -0.46
NPIPB4-210ENST00000539191 ONECUT3O60422 494 aaPredicted RBP12.16□□□□□ -0.46
NPIPB4-210ENST00000539191 R3HDM1Q15032 1099 aaKnown RBP12.16□□□□□ -0.46
NPIPB4-210ENST00000539191 KIAA0232Q92628 1395 aa12.16□□□□□ -0.46
NPIPB4-210ENST00000539191 TOPAZ1Q8N9V7 1692 aa12.16□□□□□ -0.46
NPIPB4-210ENST00000539191 PRDM11Q9NQV5 511 aa12.15□□□□□ -0.46
NPIPB4-210ENST00000539191 GPRASP1Q5JY77 1395 aa12.15□□□□□ -0.46
NPIPB4-210ENST00000539191 SPATA31A5Q5VU36 1347 aa12.14□□□□□ -0.47
NPIPB4-210ENST00000539191 SPATA31A7Q8IWB4 1347 aa12.14□□□□□ -0.47
NPIPB4-210ENST00000539191 HRCP23327 699 aa12.14□□□□□ -0.47
NPIPB4-210ENST00000539191 EZH2Q15910 746 aaKnown RBP12.14□□□□□ -0.47
NPIPB4-210ENST00000539191 TRIM37O94972 964 aa12.13□□□□□ -0.47
NPIPB4-210ENST00000539191 NUDT16Q96DE0 195 aaKnown RBP12.13□□□□□ -0.47
NPIPB4-210ENST00000539191 NRKQ7Z2Y5 1582 aa12.13□□□□□ -0.47
NPIPB4-210ENST00000539191 BAG6P46379 1132 aa12.12□□□□□ -0.47
NPIPB4-210ENST00000539191 NUP188Q5SRE5 1749 aa12.11□□□□□ -0.47
NPIPB4-210ENST00000539191 CAMTA1Q9Y6Y1 1673 aa12.11□□□□□ -0.47
NPIPB4-210ENST00000539191 ZBTB7CA1YPR0 619 aa12.11□□□□□ -0.47
NPIPB4-210ENST00000539191 NBPF1Q3BBV0 1214 aa12.11□□□□□ -0.47
NPIPB4-210ENST00000539191 CDK19Q9BWU1 502 aa12.11□□□□□ -0.47
NPIPB4-210ENST00000539191 LARP1Q6PKG0 1096 aaKnown RBP12.1□□□□□ -0.47
NPIPB4-210ENST00000539191 SPATA31A1Q5TZJ5 1347 aa12.1□□□□□ -0.47
NPIPB4-210ENST00000539191 UTRNP46939 3433 aa12.09□□□□□ -0.47
NPIPB4-210ENST00000539191 RGPD5Q99666 1765 aa12.09□□□□□ -0.47
NPIPB4-210ENST00000539191 LMO7Q8WWI1 1683 aa12.09□□□□□ -0.47
NPIPB4-210ENST00000539191 RREB1Q92766 1687 aa12.09□□□□□ -0.47
NPIPB4-210ENST00000539191 QRICH2Q9H0J4 1663 aa12.09□□□□□ -0.47
NPIPB4-210ENST00000539191 ACEP12821 1306 aa12.09□□□□□ -0.47
NPIPB4-210ENST00000539191 SSH2Q76I76 1423 aa12.07□□□□□ -0.48
NPIPB4-210ENST00000539191 CABP2Q9NPB3 220 aa12.07□□□□□ -0.48
NPIPB4-210ENST00000539191 APBA3O96018 575 aa12.06□□□□□ -0.48
NPIPB4-210ENST00000539191 NBPF8Q3BBV2 869 aa12.06□□□□□ -0.48
NPIPB4-210ENST00000539191 PTF1AQ7RTS3 328 aa12.06□□□□□ -0.48
NPIPB4-210ENST00000539191 CAMKK2Q96RR4 588 aa12.06□□□□□ -0.48
NPIPB4-210ENST00000539191 EIF3AQ14152 1382 aaKnown RBP12.05□□□□□ -0.48
NPIPB4-210ENST00000539191 SBF2Q86WG5 1849 aa12.05□□□□□ -0.48
NPIPB4-210ENST00000539191 EVA1CP58658 441 aa12.05□□□□□ -0.48
NPIPB4-210ENST00000539191 ABTB2Q8N961 1025 aa12.05□□□□□ -0.48
NPIPB4-210ENST00000539191 PPIP5K1Q6PFW1 1433 aa12.04□□□□□ -0.48
NPIPB4-210ENST00000539191 PIK3C2AO00443 1686 aa12.04□□□□□ -0.48
NPIPB4-210ENST00000539191 KIAA1210Q9ULL0 1709 aa12.04□□□□□ -0.48
NPIPB4-210ENST00000539191 POLR3AO14802 1390 aaPredicted RBP12.04□□□□□ -0.48
NPIPB4-210ENST00000539191 LRRC37A3O60309 1634 aa12.04□□□□□ -0.48
NPIPB4-210ENST00000539191 WNK3Q9BYP7 1800 aa12.03□□□□□ -0.48
NPIPB4-210ENST00000539191 SOX12O15370 315 aa12.03□□□□□ -0.48
NPIPB4-210ENST00000539191 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
NPIPB4-210ENST00000539191 PARP4Q9UKK3 1724 aaKnown RBP12.03□□□□□ -0.48
NPIPB4-210ENST00000539191 DISP2A7MBM2 1401 aa12.03□□□□□ -0.48
NPIPB4-210ENST00000539191 COL5A2P05997 1499 aaPredicted RBP12.02□□□□□ -0.48
NPIPB4-210ENST00000539191 PEAK1Q9H792 1746 aa12.02□□□□□ -0.49
NPIPB4-210ENST00000539191 COL18A1P39060 1754 aa12.01□□□□□ -0.49
NPIPB4-210ENST00000539191 PDE3BQ13370 1112 aa12.01□□□□□ -0.49
NPIPB4-210ENST00000539191 FAM196AQ6ZSG2 479 aa12.01□□□□□ -0.49
NPIPB4-210ENST00000539191 PDGFDQ9GZP0 370 aaPredicted RBP12.01□□□□□ -0.49
NPIPB4-210ENST00000539191 CCDC61Q9Y6R9 512 aa12.01□□□□□ -0.49
NPIPB4-210ENST00000539191 USP19O94966 1318 aa12□□□□□ -0.49
NPIPB4-210ENST00000539191 AKAP12Q02952 1782 aa12□□□□□ -0.49
NPIPB4-210ENST00000539191 PLEKHG3A1L390 1219 aa11.99□□□□□ -0.49
NPIPB4-210ENST00000539191 GCP02774 474 aa11.99□□□□□ -0.49
NPIPB4-210ENST00000539191 TCP11L2Q8N4U5 519 aa11.99□□□□□ -0.49
NPIPB4-210ENST00000539191 CABP1Q9NZU7 370 aa11.99□□□□□ -0.49
NPIPB4-210ENST00000539191 CENPJQ9HC77 1338 aaPredicted RBP11.98□□□□□ -0.49
NPIPB4-210ENST00000539191 AXIN2Q9Y2T1 843 aa11.98□□□□□ -0.49
NPIPB4-210ENST00000539191 KAT6BQ8WYB5 2073 aa11.98□□□□□ -0.49
NPIPB4-210ENST00000539191 NLRP6P59044 892 aa11.97□□□□□ -0.49
NPIPB4-210ENST00000539191 BARGINQ6ZT62 677 aa11.97□□□□□ -0.49
NPIPB4-210ENST00000539191 SIN3AQ96ST3 1273 aa11.97□□□□□ -0.49
NPIPB4-210ENST00000539191 ANO8Q9HCE9 1232 aaPredicted RBP11.97□□□□□ -0.49
NPIPB4-210ENST00000539191 TRPM1Q7Z4N2 1603 aa11.97□□□□□ -0.49
NPIPB4-210ENST00000539191 SLIT3O75094 1523 aa11.96□□□□□ -0.49
NPIPB4-210ENST00000539191 USP6P35125 1406 aa11.96□□□□□ -0.49
NPIPB4-210ENST00000539191 CPDO75976 1380 aa11.96□□□□□ -0.49
NPIPB4-210ENST00000539191 CRB1P82279 1406 aa11.95□□□□□ -0.5
NPIPB4-210ENST00000539191 CASZ1Q86V15 1759 aa11.95□□□□□ -0.5
NPIPB4-210ENST00000539191 MYOM1P52179 1685 aa11.95□□□□□ -0.5
NPIPB4-210ENST00000539191 NLRP13Q86W25 1043 aa11.95□□□□□ -0.5
NPIPB4-210ENST00000539191 L3MBTL2Q969R5 705 aa11.95□□□□□ -0.5
NPIPB4-210ENST00000539191 GOLGB1Q14789 3259 aaKnown RBP11.94□□□□□ -0.5
NPIPB4-210ENST00000539191 TOM1L2Q6ZVM7 507 aa11.94□□□□□ -0.5
NPIPB4-210ENST00000539191 LTN1O94822 1766 aa11.94□□□□□ -0.5
NPIPB4-210ENST00000539191 NEUROD1Q13562 356 aa11.93□□□□□ -0.5
NPIPB4-210ENST00000539191 MARCH10Q8NA82 808 aaPredicted RBP11.93□□□□□ -0.5
NPIPB4-210ENST00000539191 ZBTB7AO95365 584 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms