RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 ZNF335Q9H4Z2 1342 aaPredicted RBP33.99■■■■□ 3.03
KLHL42-202ENST00000539176 NRKQ7Z2Y5 1582 aa33.99■■■■□ 3.03
KLHL42-202ENST00000539176 ZRANB1Q9UGI0 708 aa33.98■■■■□ 3.03
KLHL42-202ENST00000539176 NGDNQ8NEJ9 315 aaKnown RBP33.97■■■■□ 3.03
KLHL42-202ENST00000539176 USP6P35125 1406 aa33.97■■■■□ 3.03
KLHL42-202ENST00000539176 POLR3AO14802 1390 aaPredicted RBP33.95■■■■□ 3.03
KLHL42-202ENST00000539176 ERICH6BQ5W0A0 696 aa33.93■■■■□ 3.02
KLHL42-202ENST00000539176 C19orf44Q9H6X5 657 aa33.93■■■■□ 3.02
KLHL42-202ENST00000539176 XIRP1Q702N8 1843 aaKnown RBP33.93■■■■□ 3.02
KLHL42-202ENST00000539176 TTC21BQ7Z4L5 1316 aa33.93■■■■□ 3.02
KLHL42-202ENST00000539176 BLMP54132 1417 aaPredicted RBP33.91■■■■□ 3.02
KLHL42-202ENST00000539176 PHF8Q9UPP1 1060 aa33.9■■■■□ 3.02
KLHL42-202ENST00000539176 ESCO1Q5FWF5 840 aa33.9■■■■□ 3.02
KLHL42-202ENST00000539176 NUDCQ9Y266 331 aa33.88■■■■□ 3.01
KLHL42-202ENST00000539176 SSH2Q76I76 1423 aa33.88■■■■□ 3.01
KLHL42-202ENST00000539176 SENP3-EIF4A1A0A087X0R7 540 aa33.88■■■■□ 3.01
KLHL42-202ENST00000539176 MTHFSP49914 203 aa33.88■■■■□ 3.01
KLHL42-202ENST00000539176 ORAI2Q96SN7 254 aa33.87■■■■□ 3.01
KLHL42-202ENST00000539176 FBLN1P23142 703 aa33.86■■■■□ 3.01
KLHL42-202ENST00000539176 LRRC7Q96NW7 1537 aa33.86■■■■□ 3.01
KLHL42-202ENST00000539176 NCOA3Q9Y6Q9 1424 aa33.85■■■■□ 3.01
KLHL42-202ENST00000539176 ATF3P18847 181 aa33.83■■■■□ 3.01
KLHL42-202ENST00000539176 DMRT2Q9Y5R5 561 aa33.83■■■■□ 3.01
KLHL42-202ENST00000539176 C1orf167Q5SNV9 1468 aa33.82■■■■□ 3
KLHL42-202ENST00000539176 COG3Q96JB2 828 aa33.82■■■■□ 3
KLHL42-202ENST00000539176 MST1RQ04912 1400 aa33.79■■■■□ 3
KLHL42-202ENST00000539176 MSH6P52701 1360 aa33.79■■■■□ 3
KLHL42-202ENST00000539176 PDE3BQ13370 1112 aa33.79■■■■□ 3
KLHL42-202ENST00000539176 ADAMTS8Q9UP79 889 aa33.79■■■■□ 3
KLHL42-202ENST00000539176 DCCP43146 1447 aa33.79■■■■□ 3
KLHL42-202ENST00000539176 WDR43Q15061 677 aaKnown RBP eCLIP33.78■■■■□ 3
KLHL42-202ENST00000539176 TTC21AQ8NDW8 1320 aa33.77■■■■□ 3
KLHL42-202ENST00000539176 PIK3C2AO00443 1686 aa33.77■■■■□ 3
KLHL42-202ENST00000539176 MAP2P11137 1827 aaKnown RBP33.77■■■■□ 3
KLHL42-202ENST00000539176 SHPRHQ149N8 1683 aa33.76■■■■□ 3
KLHL42-202ENST00000539176 OVOS2A0A0J9YW53 1432 aa33.76■■■■□ 3
KLHL42-202ENST00000539176 OVOS2Q6IE36 1432 aa33.76■■■■□ 3
KLHL42-202ENST00000539176 PAK3O75914 559 aaPredicted RBP33.74■■■□□ 2.99
KLHL42-202ENST00000539176 FOXO3O43524 673 aa33.73■■■□□ 2.99
KLHL42-202ENST00000539176 XPCQ01831 940 aaPredicted RBP33.73■■■□□ 2.99
KLHL42-202ENST00000539176 PSME1Q06323 249 aa33.73■■■□□ 2.99
KLHL42-202ENST00000539176 CADPS2Q86UW7 1296 aa33.73■■■□□ 2.99
KLHL42-202ENST00000539176 CFAP53Q96M91 514 aa33.72■■■□□ 2.99
KLHL42-202ENST00000539176 POLKQ9UBT6 870 aa33.72■■■□□ 2.99
KLHL42-202ENST00000539176 NUTM2GQ5VZR2 741 aa33.71■■■□□ 2.99
KLHL42-202ENST00000539176 PPM1GO15355 546 aaPredicted RBP33.7■■■□□ 2.99
KLHL42-202ENST00000539176 EMILIN1Q9Y6C2 1016 aa33.7■■■□□ 2.99
KLHL42-202ENST00000539176 KIF1AQ12756 1690 aa33.7■■■□□ 2.98
KLHL42-202ENST00000539176 RNF123Q5XPI4 1314 aa33.69■■■□□ 2.98
KLHL42-202ENST00000539176 RRS1Q15050 365 aaKnown RBP33.69■■■□□ 2.98
KLHL42-202ENST00000539176 COL3A1P02461 1466 aaPredicted RBP33.68■■■□□ 2.98
KLHL42-202ENST00000539176 SOX12O15370 315 aa33.68■■■□□ 2.98
KLHL42-202ENST00000539176 MARF1Q9Y4F3 1742 aaKnown RBP33.67■■■□□ 2.98
KLHL42-202ENST00000539176 AATKQ6ZMQ8 1374 aa33.66■■■□□ 2.98
KLHL42-202ENST00000539176 USP31Q70CQ4 1352 aa33.66■■■□□ 2.98
KLHL42-202ENST00000539176 NLRP6P59044 892 aa33.65■■■□□ 2.98
KLHL42-202ENST00000539176 ABTB2Q8N961 1025 aa33.65■■■□□ 2.98
KLHL42-202ENST00000539176 DDX17Q92841 729 aaKnown RBP33.64■■■□□ 2.98
KLHL42-202ENST00000539176 CCDC146Q8IYE0 955 aa33.63■■■□□ 2.97
KLHL42-202ENST00000539176 SALL2Q9Y467 1007 aaPredicted RBP33.63■■■□□ 2.97
KLHL42-202ENST00000539176 KRT28Q7Z3Y7 464 aa33.61■■■□□ 2.97
KLHL42-202ENST00000539176 TRPM3Q9HCF6 1732 aaPredicted RBP33.6■■■□□ 2.97
KLHL42-202ENST00000539176 PNPLA6Q8IY17 1366 aa33.6■■■□□ 2.97
KLHL42-202ENST00000539176 USP54Q70EL1 1684 aa33.59■■■□□ 2.97
KLHL42-202ENST00000539176 PPP4R2Q9NY27 417 aa33.59■■■□□ 2.97
KLHL42-202ENST00000539176 IRX6P78412 446 aaPredicted RBP33.57■■■□□ 2.96
KLHL42-202ENST00000539176 CDK12Q9NYV4 1490 aaPredicted RBP33.56■■■□□ 2.96
KLHL42-202ENST00000539176 PEAK1Q9H792 1746 aa33.55■■■□□ 2.96
KLHL42-202ENST00000539176 U2SURPO15042 1029 aaKnown RBP33.55■■■□□ 2.96
KLHL42-202ENST00000539176 DIAPH1O60610 1272 aaKnown RBP33.54■■■□□ 2.96
KLHL42-202ENST00000539176 U2AF1L5P0DN76 240 aaPredicted RBP33.54■■■□□ 2.96
KLHL42-202ENST00000539176 U2AF1Q01081 240 aaKnown RBP eCLIP33.54■■■□□ 2.96
KLHL42-202ENST00000539176 BRINP3Q76B58 766 aa33.54■■■□□ 2.96
KLHL42-202ENST00000539176 SLAIN2Q9P270 581 aa33.54■■■□□ 2.96
KLHL42-202ENST00000539176 LTBP4Q8N2S1 1624 aa33.53■■■□□ 2.96
KLHL42-202ENST00000539176 PLEKHG5O94827 1062 aa33.53■■■□□ 2.96
KLHL42-202ENST00000539176 LMOD2Q6P5Q4 547 aa33.53■■■□□ 2.96
KLHL42-202ENST00000539176 MAP3K19Q56UN5 1328 aa33.51■■■□□ 2.95
KLHL42-202ENST00000539176 NGEFQ8N5V2 710 aa33.49■■■□□ 2.95
KLHL42-202ENST00000539176 APAF1O14727 1248 aa33.47■■■□□ 2.95
KLHL42-202ENST00000539176 NPHP3Q7Z494 1330 aa33.47■■■□□ 2.95
KLHL42-202ENST00000539176 ALS2Q96Q42 1657 aa33.46■■■□□ 2.95
KLHL42-202ENST00000539176 IL13P35225 146 aa33.45■■■□□ 2.95
KLHL42-202ENST00000539176 AEBP2Q6ZN18 517 aaPredicted RBP33.45■■■□□ 2.95
KLHL42-202ENST00000539176 PXDNQ92626 1479 aa33.45■■■□□ 2.94
KLHL42-202ENST00000539176 HSP90AB2PQ58FF8 381 aa33.44■■■□□ 2.94
KLHL42-202ENST00000539176 RCAN3Q9UKA8 241 aa33.43■■■□□ 2.94
KLHL42-202ENST00000539176 NFAT5O94916 1531 aa33.42■■■□□ 2.94
KLHL42-202ENST00000539176 ZNF521Q96K83 1311 aa33.42■■■□□ 2.94
KLHL42-202ENST00000539176 RUNDC1Q96C34 613 aa33.42■■■□□ 2.94
KLHL42-202ENST00000539176 AMPHP49418 695 aa33.41■■■□□ 2.94
KLHL42-202ENST00000539176 LTN1O94822 1766 aa33.41■■■□□ 2.94
KLHL42-202ENST00000539176 SBNO1A3KN83 1393 aa33.4■■■□□ 2.94
KLHL42-202ENST00000539176 EIF4A2Q14240 407 aaKnown RBP33.39■■■□□ 2.94
KLHL42-202ENST00000539176 SLIT3O75094 1523 aa33.38■■■□□ 2.93
KLHL42-202ENST00000539176 FLT4P35916 1363 aa33.37■■■□□ 2.93
KLHL42-202ENST00000539176 HMOX1P09601 288 aa33.37■■■□□ 2.93
KLHL42-202ENST00000539176 RRP1P56182 461 aaKnown RBP33.37■■■□□ 2.93
KLHL42-202ENST00000539176 RRP7AQ9Y3A4 280 aaKnown RBP33.37■■■□□ 2.93
KLHL42-202ENST00000539176 TNS3Q68CZ2 1445 aa33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms