RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 ZIC2O95409 532 aaPredicted RBP5.98□□□□□ -1.45
CBX3P4-201ENST00000538909 NUTM1Q86Y26 1132 aa5.98□□□□□ -1.45
CBX3P4-201ENST00000538909 FDX1P10109 184 aa5.97□□□□□ -1.45
CBX3P4-201ENST00000538909 BMP2P12643 396 aa5.97□□□□□ -1.45
CBX3P4-201ENST00000538909 GPR161Q8N6U8 529 aaKnown RBP5.97□□□□□ -1.45
CBX3P4-201ENST00000538909 ITPKCQ96DU7 683 aa5.97□□□□□ -1.45
CBX3P4-201ENST00000538909 KLF16Q9BXK1 252 aaPredicted RBP5.97□□□□□ -1.45
CBX3P4-201ENST00000538909 EVA1BQ9NVM1 165 aa5.97□□□□□ -1.45
CBX3P4-201ENST00000538909 PCDHGC3Q9UN70 934 aa5.97□□□□□ -1.45
CBX3P4-201ENST00000538909 IRS1P35568 1242 aa5.96□□□□□ -1.46
CBX3P4-201ENST00000538909 KCNH2Q12809 1159 aa5.96□□□□□ -1.46
CBX3P4-201ENST00000538909 MAP2K5Q13163 448 aa5.96□□□□□ -1.46
CBX3P4-201ENST00000538909 PTPRNQ16849 979 aa5.96□□□□□ -1.46
CBX3P4-201ENST00000538909 SVOPQ8N4V2 548 aa5.96□□□□□ -1.46
CBX3P4-201ENST00000538909 KRTAP4-8Q9BYQ9 185 aa5.96□□□□□ -1.46
CBX3P4-201ENST00000538909 UPP2O95045 317 aa5.95□□□□□ -1.46
CBX3P4-201ENST00000538909 MPNDQ8N594 471 aa5.95□□□□□ -1.46
CBX3P4-201ENST00000538909 FAM174AQ8TBP5 190 aa5.95□□□□□ -1.46
CBX3P4-201ENST00000538909 DNMT3LQ9UJW3 386 aa5.95□□□□□ -1.46
CBX3P4-201ENST00000538909 NR3C2P08235 984 aa5.94□□□□□ -1.46
CBX3P4-201ENST00000538909 COL25A1Q9BXS0 654 aaPredicted RBP5.94□□□□□ -1.46
CBX3P4-201ENST00000538909 RTN4Q9NQC3 1192 aaKnown RBP5.94□□□□□ -1.46
CBX3P4-201ENST00000538909 IRF6O14896 467 aa5.93□□□□□ -1.46
CBX3P4-201ENST00000538909 CTHP32929 405 aa5.93□□□□□ -1.46
CBX3P4-201ENST00000538909 AMER1Q5JTC6 1135 aaPredicted RBP5.93□□□□□ -1.46
CBX3P4-201ENST00000538909 XP32Q5T750 250 aa5.93□□□□□ -1.46
CBX3P4-201ENST00000538909 ZNF385CQ66K41 422 aaPredicted RBP5.93□□□□□ -1.46
CBX3P4-201ENST00000538909 LINC00528Q8N1L1 170 aa5.93□□□□□ -1.46
CBX3P4-201ENST00000538909 PRR7Q8TB68 274 aa5.93□□□□□ -1.46
CBX3P4-201ENST00000538909 FOXJ1Q92949 421 aa5.93□□□□□ -1.46
CBX3P4-201ENST00000538909 FAM217BQ9NTX9 383 aaPredicted RBP5.93□□□□□ -1.46
CBX3P4-201ENST00000538909 DNMT3AQ9Y6K1 912 aaPredicted RBP5.93□□□□□ -1.46
CBX3P4-201ENST00000538909 WHAMMQ8TF30 809 aa5.92□□□□□ -1.46
CBX3P4-201ENST00000538909 GPCPD1Q9NPB8 672 aa5.92□□□□□ -1.46
CBX3P4-201ENST00000538909 SOS2Q07890 1332 aaPredicted RBP5.92□□□□□ -1.46
CBX3P4-201ENST00000538909 NDUFV2P19404 249 aa5.91□□□□□ -1.46
CBX3P4-201ENST00000538909 AGERQ15109 404 aa5.91□□□□□ -1.46
CBX3P4-201ENST00000538909 RNFT1Q5M7Z0 435 aa5.91□□□□□ -1.46
CBX3P4-201ENST00000538909 MEIOBQ8N635 442 aa5.91□□□□□ -1.46
CBX3P4-201ENST00000538909 CCDC102AQ96A19 550 aa5.91□□□□□ -1.46
CBX3P4-201ENST00000538909 FIGNL2A6NMB9 653 aa5.9□□□□□ -1.46
CBX3P4-201ENST00000538909 IGHA1P01876 353 aa5.9□□□□□ -1.46
CBX3P4-201ENST00000538909 CLCN1P35523 988 aa5.9□□□□□ -1.46
CBX3P4-201ENST00000538909 MARSP56192 900 aaKnown RBP5.9□□□□□ -1.46
CBX3P4-201ENST00000538909 PTSQ03393 145 aa5.9□□□□□ -1.46
CBX3P4-201ENST00000538909 KRI1Q8N9T8 703 aaKnown RBP5.9□□□□□ -1.46
CBX3P4-201ENST00000538909 CDK15Q96Q40 435 aa5.9□□□□□ -1.46
CBX3P4-201ENST00000538909 NR5A1Q13285 461 aa5.89□□□□□ -1.47
CBX3P4-201ENST00000538909 MOXD2PA6NHM9 499 aa5.88□□□□□ -1.47
CBX3P4-201ENST00000538909 GRM5P41594 1212 aa5.88□□□□□ -1.47
CBX3P4-201ENST00000538909 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.88□□□□□ -1.47
CBX3P4-201ENST00000538909 SPIRE2Q8WWL2 714 aa5.88□□□□□ -1.47
CBX3P4-201ENST00000538909 MAP10Q9P2G4 905 aa5.88□□□□□ -1.47
CBX3P4-201ENST00000538909 CDC14CA4D256 554 aa5.87□□□□□ -1.47
CBX3P4-201ENST00000538909 TTLL8A6PVC2 850 aa5.87□□□□□ -1.47
CBX3P4-201ENST00000538909 SPTLC1O15269 473 aa5.87□□□□□ -1.47
CBX3P4-201ENST00000538909 ARHGEF15O94989 841 aa5.87□□□□□ -1.47
CBX3P4-201ENST00000538909 MTMR2Q13614 643 aa5.87□□□□□ -1.47
CBX3P4-201ENST00000538909 C4orf48Q5BLP8 95 aa5.87□□□□□ -1.47
CBX3P4-201ENST00000538909 MINK1Q8N4C8 1332 aaPredicted RBP5.87□□□□□ -1.47
CBX3P4-201ENST00000538909 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
CBX3P4-201ENST00000538909 FSHRP23945 695 aa5.86□□□□□ -1.47
CBX3P4-201ENST00000538909 FOXK2Q01167 660 aa5.86□□□□□ -1.47
CBX3P4-201ENST00000538909 KANK3Q6NY19 840 aa5.86□□□□□ -1.47
CBX3P4-201ENST00000538909 VWA5B2Q8N398 1253 aa5.86□□□□□ -1.47
CBX3P4-201ENST00000538909 CCDC155Q8N6L0 562 aa5.86□□□□□ -1.47
CBX3P4-201ENST00000538909 TSEN34Q9BSV6 310 aaKnown RBP5.86□□□□□ -1.47
CBX3P4-201ENST00000538909 DESI1Q6ICB0 168 aa5.85□□□□□ -1.47
CBX3P4-201ENST00000538909 LYPD8Q6UX82 237 aa5.85□□□□□ -1.47
CBX3P4-201ENST00000538909 SCARF2Q96GP6 870 aaPredicted RBP5.85□□□□□ -1.47
CBX3P4-201ENST00000538909 KRTAP9-2Q9BYQ4 174 aa5.85□□□□□ -1.47
CBX3P4-201ENST00000538909 SLURP2P0DP57 97 aa5.84□□□□□ -1.47
CBX3P4-201ENST00000538909 NANOS1Q8WY41 292 aaKnown RBP5.84□□□□□ -1.47
CBX3P4-201ENST00000538909 SPDYE5A6NIY4 337 aa5.83□□□□□ -1.48
CBX3P4-201ENST00000538909 SSTR3P32745 418 aaPredicted RBP5.83□□□□□ -1.48
CBX3P4-201ENST00000538909 BPHLQ86WA6 291 aaPredicted RBP5.83□□□□□ -1.48
CBX3P4-201ENST00000538909 CFAP99D6REC4 459 aa5.82□□□□□ -1.48
CBX3P4-201ENST00000538909 MSTNO14793 375 aa5.82□□□□□ -1.48
CBX3P4-201ENST00000538909 ADAM23O75077 832 aa5.82□□□□□ -1.48
CBX3P4-201ENST00000538909 ITGA6P23229 1130 aa5.82□□□□□ -1.48
CBX3P4-201ENST00000538909 CBLBQ13191 982 aa5.82□□□□□ -1.48
CBX3P4-201ENST00000538909 LYPD4Q6UWN0 246 aa5.82□□□□□ -1.48
CBX3P4-201ENST00000538909 SV2AQ7L0J3 742 aa5.82□□□□□ -1.48
CBX3P4-201ENST00000538909 VASH1Q7L8A9 365 aaPredicted RBP5.82□□□□□ -1.48
CBX3P4-201ENST00000538909 KRTAP9-6A0A140TA67 174 aa5.81□□□□□ -1.48
CBX3P4-201ENST00000538909 ADAMTS2O95450 1211 aa5.81□□□□□ -1.48
CBX3P4-201ENST00000538909 F12P00748 615 aaPredicted RBP5.81□□□□□ -1.48
CBX3P4-201ENST00000538909 MAP3K10Q02779 954 aa5.81□□□□□ -1.48
CBX3P4-201ENST00000538909 PLA2G4EQ3MJ16 856 aa5.81□□□□□ -1.48
CBX3P4-201ENST00000538909 CCDC116Q8IYX3 515 aa5.81□□□□□ -1.48
CBX3P4-201ENST00000538909 EMILIN1Q9Y6C2 1016 aa5.81□□□□□ -1.48
CBX3P4-201ENST00000538909 MAGEB6P1A0A0J9YX57 407 aa5.8□□□□□ -1.48
CBX3P4-201ENST00000538909 SLC35F4A4IF30 521 aa5.8□□□□□ -1.48
CBX3P4-201ENST00000538909 SH3RF1Q7Z6J0 888 aa5.8□□□□□ -1.48
CBX3P4-201ENST00000538909 SPOCK3Q9BQ16 436 aa5.8□□□□□ -1.48
CBX3P4-201ENST00000538909 TSC1Q92574 1164 aa5.79□□□□□ -1.48
CBX3P4-201ENST00000538909 PCDHB15Q9Y5E8 787 aa5.79□□□□□ -1.48
CBX3P4-201ENST00000538909 PER1O15534 1290 aaPredicted RBP5.78□□□□□ -1.48
CBX3P4-201ENST00000538909 SPINT1O43278 529 aa5.78□□□□□ -1.48
CBX3P4-201ENST00000538909 CTSOP43234 321 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms