RNA–Protein interactions for RNA: ENST00000538859.1

NPIPB4-209, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 526 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-209	ENST00000538859	RBM46	Q8TBY0	533 aa	Known RBP	4.96	□□□□□ -1.62
NPIPB4-209	ENST00000538859	DXO	O77932	396 aa	Known RBP	4.95	□□□□□ -1.62
NPIPB4-209	ENST00000538859	ATP6V1A	P38606	617 aa		4.95	□□□□□ -1.62
NPIPB4-209	ENST00000538859	WDR4	P57081	412 aa	Known RBP	4.95	□□□□□ -1.62
NPIPB4-209	ENST00000538859	SRSF11	Q05519	484 aa	Known RBP	4.95	□□□□□ -1.62
NPIPB4-209	ENST00000538859	NNT	Q13423	1086 aa		4.95	□□□□□ -1.62
NPIPB4-209	ENST00000538859	ZFP64	Q9NPA5	681 aa		4.95	□□□□□ -1.62
NPIPB4-209	ENST00000538859	ENAM	Q9NRM1	1142 aa		4.95	□□□□□ -1.62
NPIPB4-209	ENST00000538859	SCO2	A0A1W2PP80	73 aa		4.94	□□□□□ -1.62
NPIPB4-209	ENST00000538859	CHGA	P10645	457 aa	Known RBP	4.94	□□□□□ -1.62
NPIPB4-209	ENST00000538859	FAM161A	Q3B820	660 aa		4.94	□□□□□ -1.62
NPIPB4-209	ENST00000538859	COL8A1	P27658	744 aa		4.93	□□□□□ -1.62
NPIPB4-209	ENST00000538859	SH3RF1	Q7Z6J0	888 aa		4.93	□□□□□ -1.62
NPIPB4-209	ENST00000538859	CCDC155	Q8N6L0	562 aa		4.93	□□□□□ -1.62
NPIPB4-209	ENST00000538859	TLL2	Q9Y6L7	1015 aa		4.93	□□□□□ -1.62
NPIPB4-209	ENST00000538859	ADH1C	P00326	375 aa		4.92	□□□□□ -1.62
NPIPB4-209	ENST00000538859	YBX3	P16989	372 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
NPIPB4-209	ENST00000538859	PODN	Q7Z5L7	613 aa		4.92	□□□□□ -1.62
NPIPB4-209	ENST00000538859	FZD5	Q13467	585 aa		4.91	□□□□□ -1.62
NPIPB4-209	ENST00000538859	GAS6	Q14393	721 aa		4.91	□□□□□ -1.62
NPIPB4-209	ENST00000538859	CCDC24	Q8N4L8	307 aa		4.91	□□□□□ -1.62
NPIPB4-209	ENST00000538859	ZFAND3	Q9H8U3	227 aa		4.91	□□□□□ -1.62
NPIPB4-209	ENST00000538859	PTCRA	Q6ISU1	281 aa	Predicted RBP	4.9	□□□□□ -1.63
NPIPB4-209	ENST00000538859	SV2A	Q7L0J3	742 aa		4.9	□□□□□ -1.63
NPIPB4-209	ENST00000538859	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	4.89	□□□□□ -1.63
NPIPB4-209	ENST00000538859	SLC35F4	A4IF30	521 aa		4.89	□□□□□ -1.63
NPIPB4-209	ENST00000538859	ITGA6	P23229	1130 aa		4.89	□□□□□ -1.63
NPIPB4-209	ENST00000538859	SH3BP2	P78314	561 aa		4.89	□□□□□ -1.63
NPIPB4-209	ENST00000538859	C1QTNF9B	B2RNN3	333 aa		4.88	□□□□□ -1.63
NPIPB4-209	ENST00000538859	BMP2	P12643	396 aa		4.88	□□□□□ -1.63
NPIPB4-209	ENST00000538859	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	4.88	□□□□□ -1.63
NPIPB4-209	ENST00000538859	NBPF11	Q86T75	865 aa		4.88	□□□□□ -1.63
NPIPB4-209	ENST00000538859	MPND	Q8N594	471 aa		4.88	□□□□□ -1.63
NPIPB4-209	ENST00000538859	SNRPN	P63162	240 aa	Known RBP	4.87	□□□□□ -1.63
NPIPB4-209	ENST00000538859	LINC00528	Q8N1L1	170 aa		4.87	□□□□□ -1.63
NPIPB4-209	ENST00000538859	ITPKC	Q96DU7	683 aa		4.87	□□□□□ -1.63
NPIPB4-209	ENST00000538859	CDC14C	A4D256	554 aa		4.86	□□□□□ -1.63
NPIPB4-209	ENST00000538859	ZIC2	O95409	532 aa	Predicted RBP	4.86	□□□□□ -1.63
NPIPB4-209	ENST00000538859	DOC2B	Q14184	412 aa		4.86	□□□□□ -1.63
NPIPB4-209	ENST00000538859	CD163	Q86VB7	1156 aa		4.86	□□□□□ -1.63
NPIPB4-209	ENST00000538859	NEDD1	Q8NHV4	660 aa		4.86	□□□□□ -1.63
NPIPB4-209	ENST00000538859	BCR	P11274	1271 aa		4.85	□□□□□ -1.63
NPIPB4-209	ENST00000538859	RSPH4A	Q5TD94	716 aa		4.85	□□□□□ -1.63
NPIPB4-209	ENST00000538859	ALYREF	Q86V81	257 aa	Known RBP	4.85	□□□□□ -1.63
NPIPB4-209	ENST00000538859	LCE4A	Q5TA78	99 aa		4.84	□□□□□ -1.63
NPIPB4-209	ENST00000538859	MEIOB	Q8N635	442 aa		4.84	□□□□□ -1.63
NPIPB4-209	ENST00000538859	FMNL2	Q96PY5	1086 aa		4.84	□□□□□ -1.63
NPIPB4-209	ENST00000538859	PTGDR	Q13258	359 aa		4.83	□□□□□ -1.64
NPIPB4-209	ENST00000538859	MCTP1	Q6DN14	999 aa		4.83	□□□□□ -1.64
NPIPB4-209	ENST00000538859	USB1	Q9BQ65	265 aa	Known RBP	4.83	□□□□□ -1.64
NPIPB4-209	ENST00000538859	PLEKHG3	A1L390	1219 aa		4.82	□□□□□ -1.64
NPIPB4-209	ENST00000538859	CHRNA4	P43681	627 aa		4.82	□□□□□ -1.64
NPIPB4-209	ENST00000538859	GCGR	P47871	477 aa		4.82	□□□□□ -1.64
NPIPB4-209	ENST00000538859	PXYLP1	Q8TE99	480 aa		4.82	□□□□□ -1.64
NPIPB4-209	ENST00000538859	ACD	Q96AP0	544 aa		4.82	□□□□□ -1.64
NPIPB4-209	ENST00000538859	FIGNL2	A6NMB9	653 aa		4.81	□□□□□ -1.64
NPIPB4-209	ENST00000538859	TTLL8	A6PVC2	850 aa		4.81	□□□□□ -1.64
NPIPB4-209	ENST00000538859	TXK	P42681	527 aa		4.81	□□□□□ -1.64
NPIPB4-209	ENST00000538859	RSPO4	Q2I0M5	234 aa	Predicted RBP	4.81	□□□□□ -1.64
NPIPB4-209	ENST00000538859	ARIH1	Q9Y4X5	557 aa	Predicted RBP	4.81	□□□□□ -1.64
NPIPB4-209	ENST00000538859	UPP2	O95045	317 aa		4.79	□□□□□ -1.64
NPIPB4-209	ENST00000538859	NR3C2	P08235	984 aa		4.79	□□□□□ -1.64
NPIPB4-209	ENST00000538859	RDH13	Q8NBN7	331 aa		4.79	□□□□□ -1.64
NPIPB4-209	ENST00000538859	IGF1R	P08069	1367 aa		4.78	□□□□□ -1.64
NPIPB4-209	ENST00000538859		Q3C1V9	767 aa		4.78	□□□□□ -1.64
NPIPB4-209	ENST00000538859	NKAPL	Q5M9Q1	402 aa		4.78	□□□□□ -1.64
NPIPB4-209	ENST00000538859	SUV39H2	Q9H5I1	410 aa		4.78	□□□□□ -1.64
NPIPB4-209	ENST00000538859	LRRC4B	Q9NT99	713 aa		4.78	□□□□□ -1.64
NPIPB4-209	ENST00000538859	CUEDC1	Q9NWM3	386 aa	Predicted RBP	4.78	□□□□□ -1.64
NPIPB4-209	ENST00000538859	SENP3-EIF4A1	A0A087X0R7	540 aa		4.77	□□□□□ -1.65
NPIPB4-209	ENST00000538859	VARS	P26640	1264 aa	Known RBP	4.77	□□□□□ -1.65
NPIPB4-209	ENST00000538859	MBIP	Q9NS73	344 aa		4.77	□□□□□ -1.65
NPIPB4-209	ENST00000538859	CDK15	Q96Q40	435 aa		4.76	□□□□□ -1.65
NPIPB4-209	ENST00000538859	COL17A1	Q9UMD9	1497 aa	Predicted RBP	4.75	□□□□□ -1.65
NPIPB4-209	ENST00000538859	PAX4	O43316	350 aa		4.75	□□□□□ -1.65
NPIPB4-209	ENST00000538859	HYAL3	O43820	417 aa	Predicted RBP	4.75	□□□□□ -1.65
NPIPB4-209	ENST00000538859	TSEN34	Q9BSV6	310 aa	Known RBP	4.75	□□□□□ -1.65
NPIPB4-209	ENST00000538859	MKL2	Q9ULH7	1088 aa		4.75	□□□□□ -1.65
NPIPB4-209	ENST00000538859	OIP5	O43482	229 aa		4.74	□□□□□ -1.65
NPIPB4-209	ENST00000538859	HOXB4	P17483	251 aa	Predicted RBP	4.74	□□□□□ -1.65
NPIPB4-209	ENST00000538859	JUND	P17535	347 aa		4.74	□□□□□ -1.65
NPIPB4-209	ENST00000538859	LRP8	Q14114	963 aa		4.74	□□□□□ -1.65
NPIPB4-209	ENST00000538859	GRIN2C	Q14957	1233 aa		4.74	□□□□□ -1.65
NPIPB4-209	ENST00000538859	LINC01559	Q495D7	138 aa		4.74	□□□□□ -1.65
NPIPB4-209	ENST00000538859	LINC00114	Q6XXX2	140 aa		4.74	□□□□□ -1.65
NPIPB4-209	ENST00000538859	DAXX	Q9UER7	740 aa	Predicted RBP	4.74	□□□□□ -1.65
NPIPB4-209	ENST00000538859	DDX11L8	A8MPP1	907 aa		4.73	□□□□□ -1.65
NPIPB4-209	ENST00000538859	GRM5	P41594	1212 aa		4.73	□□□□□ -1.65
NPIPB4-209	ENST00000538859	BAP1	Q92560	729 aa		4.73	□□□□□ -1.65
NPIPB4-209	ENST00000538859	SHISA8	B8ZZ34	492 aa		4.72	□□□□□ -1.65
NPIPB4-209	ENST00000538859	METTL3	Q86U44	580 aa	Known RBP	4.72	□□□□□ -1.65
NPIPB4-209	ENST00000538859	NUDT12	Q9BQG2	462 aa		4.72	□□□□□ -1.65
NPIPB4-209	ENST00000538859	DYRK3	O43781	588 aa		4.71	□□□□□ -1.66
NPIPB4-209	ENST00000538859	OAT	P04181	439 aa		4.71	□□□□□ -1.66
NPIPB4-209	ENST00000538859	NR5A1	Q13285	461 aa		4.7	□□□□□ -1.66
NPIPB4-209	ENST00000538859	GRIPAP1	Q4V328	841 aa		4.7	□□□□□ -1.66
NPIPB4-209	ENST00000538859	PRSS36	Q5K4E3	855 aa		4.7	□□□□□ -1.66
NPIPB4-209	ENST00000538859	C1orf229	Q6ZS94	237 aa	Predicted RBP	4.7	□□□□□ -1.66
NPIPB4-209	ENST00000538859	ZNF511	Q8NB15	262 aa		4.7	□□□□□ -1.66
NPIPB4-209	ENST00000538859	CCER1	Q8TC90	406 aa	Predicted RBP	4.7	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms