RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 MORC1Q86VD1 984 aa14.45□□□□□ -0.1
TNFRSF1A-211ENST00000538363 NSD3Q9BZ95 1437 aa14.45□□□□□ -0.1
TNFRSF1A-211ENST00000538363 ACEP12821 1306 aa14.44□□□□□ -0.1
TNFRSF1A-211ENST00000538363 PLEKHG3A1L390 1219 aa14.44□□□□□ -0.1
TNFRSF1A-211ENST00000538363 ROBO1Q9Y6N7 1651 aa14.44□□□□□ -0.1
TNFRSF1A-211ENST00000538363 ATP7BP35670 1465 aa14.44□□□□□ -0.1
TNFRSF1A-211ENST00000538363 IQSEC2Q5JU85 1478 aa14.44□□□□□ -0.1
TNFRSF1A-211ENST00000538363 DCCP43146 1447 aa14.43□□□□□ -0.1
TNFRSF1A-211ENST00000538363 CARD14Q9BXL6 1004 aa14.43□□□□□ -0.1
TNFRSF1A-211ENST00000538363 MST1RQ04912 1400 aa14.42□□□□□ -0.1
TNFRSF1A-211ENST00000538363 PER1O15534 1290 aaPredicted RBP14.42□□□□□ -0.1
TNFRSF1A-211ENST00000538363 PRKRIP1Q9H875 184 aaPredicted RBP14.42□□□□□ -0.1
TNFRSF1A-211ENST00000538363 A0A1W2PP64 1363 aa14.42□□□□□ -0.1
TNFRSF1A-211ENST00000538363 LMOD2Q6P5Q4 547 aa14.41□□□□□ -0.1
TNFRSF1A-211ENST00000538363 KIF1AQ12756 1690 aa14.4□□□□□ -0.1
TNFRSF1A-211ENST00000538363 TNNT2P45379 298 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF1A-211ENST00000538363 ORAI2Q96SN7 254 aa14.4□□□□□ -0.1
TNFRSF1A-211ENST00000538363 SLAIN2Q9P270 581 aa14.4□□□□□ -0.1
TNFRSF1A-211ENST00000538363 COG3Q96JB2 828 aa14.39□□□□□ -0.11
TNFRSF1A-211ENST00000538363 GGNBP2Q9H3C7 697 aa14.39□□□□□ -0.11
TNFRSF1A-211ENST00000538363 C1orf167Q5SNV9 1468 aa14.38□□□□□ -0.11
TNFRSF1A-211ENST00000538363 NHSL1Q5SYE7 1610 aa14.38□□□□□ -0.11
TNFRSF1A-211ENST00000538363 AKAP12Q02952 1782 aa14.38□□□□□ -0.11
TNFRSF1A-211ENST00000538363 FOXO3O43524 673 aa14.38□□□□□ -0.11
TNFRSF1A-211ENST00000538363 EDC4Q6P2E9 1401 aaKnown RBP14.38□□□□□ -0.11
TNFRSF1A-211ENST00000538363 MYBBP1AQ9BQG0 1328 aaKnown RBP14.38□□□□□ -0.11
TNFRSF1A-211ENST00000538363 CCER2I3L3R5 266 aa14.37□□□□□ -0.11
TNFRSF1A-211ENST00000538363 PLEKHG5O94827 1062 aa14.37□□□□□ -0.11
TNFRSF1A-211ENST00000538363 AMER1Q5JTC6 1135 aaPredicted RBP14.37□□□□□ -0.11
TNFRSF1A-211ENST00000538363 KRT28Q7Z3Y7 464 aa14.37□□□□□ -0.11
TNFRSF1A-211ENST00000538363 MRS2Q9HD23 443 aa14.37□□□□□ -0.11
TNFRSF1A-211ENST00000538363 NSD2O96028 1365 aa14.36□□□□□ -0.11
TNFRSF1A-211ENST00000538363 UBAP1LF5GYI3 381 aa14.36□□□□□ -0.11
TNFRSF1A-211ENST00000538363 TOM1O60784 492 aa14.36□□□□□ -0.11
TNFRSF1A-211ENST00000538363 ABTB2Q8N961 1025 aa14.36□□□□□ -0.11
TNFRSF1A-211ENST00000538363 TTC21BQ7Z4L5 1316 aa14.36□□□□□ -0.11
TNFRSF1A-211ENST00000538363 TTC21AQ8NDW8 1320 aa14.36□□□□□ -0.11
TNFRSF1A-211ENST00000538363 PHLPP1O60346 1717 aa14.35□□□□□ -0.11
TNFRSF1A-211ENST00000538363 MON2Q7Z3U7 1717 aa14.35□□□□□ -0.11
TNFRSF1A-211ENST00000538363 FYB1O15117 783 aa14.35□□□□□ -0.11
TNFRSF1A-211ENST00000538363 XPCQ01831 940 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1A-211ENST00000538363 NME9Q86XW9 330 aa14.35□□□□□ -0.11
TNFRSF1A-211ENST00000538363 ZNF219Q9P2Y4 722 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1A-211ENST00000538363 NPC1L1Q9UHC9 1359 aa14.34□□□□□ -0.11
TNFRSF1A-211ENST00000538363 CPSF1Q10570 1443 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-211ENST00000538363 NLRP6P59044 892 aa14.34□□□□□ -0.11
TNFRSF1A-211ENST00000538363 PIP4K2BP78356 416 aa14.34□□□□□ -0.11
TNFRSF1A-211ENST00000538363 CFAP53Q96M91 514 aa14.34□□□□□ -0.11
TNFRSF1A-211ENST00000538363 NPHP3Q7Z494 1330 aa14.34□□□□□ -0.11
TNFRSF1A-211ENST00000538363 NRKQ7Z2Y5 1582 aa14.34□□□□□ -0.11
TNFRSF1A-211ENST00000538363 USP6P35125 1406 aa14.33□□□□□ -0.11
TNFRSF1A-211ENST00000538363 CD163L1Q9NR16 1453 aa14.33□□□□□ -0.12
TNFRSF1A-211ENST00000538363 NUTM2GQ5VZR2 741 aa14.33□□□□□ -0.12
TNFRSF1A-211ENST00000538363 NLRP13Q86W25 1043 aa14.33□□□□□ -0.12
TNFRSF1A-211ENST00000538363 POLR3AO14802 1390 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1A-211ENST00000538363 PPM1GO15355 546 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF1A-211ENST00000538363 SOX12O15370 315 aa14.32□□□□□ -0.12
TNFRSF1A-211ENST00000538363 PPP2R1AP30153 589 aa14.32□□□□□ -0.12
TNFRSF1A-211ENST00000538363 BRD4O60885 1362 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF1A-211ENST00000538363 PARD3Q8TEW0 1356 aa14.32□□□□□ -0.12
TNFRSF1A-211ENST00000538363 TRPM3Q9HCF6 1732 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF1A-211ENST00000538363 KIF20BQ96Q89 1820 aa14.31□□□□□ -0.12
TNFRSF1A-211ENST00000538363 COL16A1Q07092 1604 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF1A-211ENST00000538363 AHDC1Q5TGY3 1603 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF1A-211ENST00000538363 ZBTB7CA1YPR0 619 aa14.3□□□□□ -0.12
TNFRSF1A-211ENST00000538363 HAP1P54257 671 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF1A-211ENST00000538363 BRINP3Q76B58 766 aa14.3□□□□□ -0.12
TNFRSF1A-211ENST00000538363 FAM9BQ8IZU0 186 aa14.3□□□□□ -0.12
TNFRSF1A-211ENST00000538363 DDX17Q92841 729 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-211ENST00000538363 YTHDC1Q96MU7 727 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-211ENST00000538363 ZRANB1Q9UGI0 708 aa14.3□□□□□ -0.12
TNFRSF1A-211ENST00000538363 WDR43Q15061 677 aaKnown RBP eCLIP14.29□□□□□ -0.12
TNFRSF1A-211ENST00000538363 ATF5Q9Y2D1 282 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1A-211ENST00000538363 ABCA3Q99758 1704 aa14.27□□□□□ -0.13
TNFRSF1A-211ENST00000538363 PXDNQ92626 1479 aa14.26□□□□□ -0.13
TNFRSF1A-211ENST00000538363 MTHFSP49914 203 aa14.26□□□□□ -0.13
TNFRSF1A-211ENST00000538363 KCNH5Q8NCM2 988 aa14.26□□□□□ -0.13
TNFRSF1A-211ENST00000538363 PIK3C2AO00443 1686 aa14.26□□□□□ -0.13
TNFRSF1A-211ENST00000538363 ALS2Q96Q42 1657 aa14.26□□□□□ -0.13
TNFRSF1A-211ENST00000538363 ANKRD26Q9UPS8 1709 aa14.25□□□□□ -0.13
TNFRSF1A-211ENST00000538363 MARF1Q9Y4F3 1742 aaKnown RBP14.25□□□□□ -0.13
TNFRSF1A-211ENST00000538363 DSG3P32926 999 aa14.25□□□□□ -0.13
TNFRSF1A-211ENST00000538363 AMPHP49418 695 aa14.25□□□□□ -0.13
TNFRSF1A-211ENST00000538363 NUDCQ9Y266 331 aa14.25□□□□□ -0.13
TNFRSF1A-211ENST00000538363 CCDC184Q52MB2 194 aa14.23□□□□□ -0.13
TNFRSF1A-211ENST00000538363 CRYBG1Q9Y4K1 1723 aa14.23□□□□□ -0.13
TNFRSF1A-211ENST00000538363 SBNO1A3KN83 1393 aa14.22□□□□□ -0.13
TNFRSF1A-211ENST00000538363 ABCB7O75027 752 aa14.22□□□□□ -0.13
TNFRSF1A-211ENST00000538363 ATXN8OSP0DMR3 200 aa14.22□□□□□ -0.13
TNFRSF1A-211ENST00000538363 RRS1Q15050 365 aaKnown RBP14.22□□□□□ -0.13
TNFRSF1A-211ENST00000538363 LRRC59Q96AG4 307 aaKnown RBP14.22□□□□□ -0.13
TNFRSF1A-211ENST00000538363 PHRF1Q9P1Y6 1649 aaKnown RBP14.22□□□□□ -0.13
TNFRSF1A-211ENST00000538363 ARHGEF10O15013 1369 aa14.22□□□□□ -0.13
TNFRSF1A-211ENST00000538363 USP31Q70CQ4 1352 aa14.22□□□□□ -0.13
TNFRSF1A-211ENST00000538363 SHPRHQ149N8 1683 aa14.21□□□□□ -0.13
TNFRSF1A-211ENST00000538363 U2SURPO15042 1029 aaKnown RBP14.21□□□□□ -0.13
TNFRSF1A-211ENST00000538363 SSH2Q76I76 1423 aa14.21□□□□□ -0.13
TNFRSF1A-211ENST00000538363 SPATA31A3Q5VYP0 1347 aa14.2□□□□□ -0.14
TNFRSF1A-211ENST00000538363 DIAPH1O60610 1272 aaKnown RBP14.2□□□□□ -0.14
TNFRSF1A-211ENST00000538363 NEFMP07197 916 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms